Sequence details NCBI ID: XM_004850470.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cda
Gene Name cytidine deaminase, transcript variant X2
Entrez Gene ID 101715225

Database interlinks

Part of NW_004624764.1 (Scaffold)

For more information consult the page for NW_004624764.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDA ENSCPOG00000014170 (Guinea pig)

Gene Details

cytidine deaminase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012766, Guinea pig)

Protein Percentage 93.1%
CDS Percentage 91.72%
Ka/Ks Ratio 0.11921 (Ka = 0.0329, Ks = 0.2759)

CDA ENSG00000158825 (Human)

Gene Details

cytidine deaminase

External Links

Gene Match (Ensembl Protein ID: ENSP00000364212, Human)

Protein Percentage 81.38%
CDS Percentage 84.14%
Ka/Ks Ratio 0.21216 (Ka = 0.1077, Ks = 0.5077)

Cda ENSMUSG00000028755 (Mouse)

Gene Details

cytidine deaminase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030535, Mouse)

Protein Percentage 89.66%
CDS Percentage 84.14%
Ka/Ks Ratio 0.05142 (Ka = 0.048, Ks = 0.9341)

Genome Location

Sequence Coding sequence

Length: 438 bp    Location: 5621938..5644933   Strand: +
Raw sequence   
>XM_004850470.1
ATGGCCCAGGATCGTCGCACCTGCGCCCTGGAGCCTGAGCACGTCCAGCGCCTGCTGCTGTCCTCCCGGGAAGCCAAGAAGTCCGCCTACTGCCCCTACAGCCATTTCCCGGTGGGGGCCGCCCTGCTTACCGGAGACGGGCTGATCTTCTCAGGGTGCAACGTAGAAAATGCCTGCTATGCACTGGGCATCTGTGCTGAACGGACTGCAATCCAGAAGGCCATCTCTGAAGGGCATAAGGACTTCAGGGCTATTGCTATCTCCAGTGACTTGCAAGATGATTTTATCTCACCATGCGGGGCTTGCAGGCAAGTGATGAGAGAGTTTGGCACTGACTGGGCCGTGTACATGACCAAAGCAGATGGTACTTATGTGGTCAGAACAGTCCAGGAGCTGCTGCCTGTGTCCTTCGGGCCTGAGGACCTGCAGAAGATCTAG

Related Sequences

XP_004850527.1 Protein

Cda PREDICTED: cytidine deaminase isoform X2 [Heterocephalus glaber]

Length: 145 aa      
>XP_004850527.1
MAQDRRTCALEPEHVQRLLLSSREAKKSAYCPYSHFPVGAALLTGDGLIFSGCNVENACYALGICAERTAIQKAISEGHKDFRAIAISSDLQDDFISPCGACRQVMREFGTDWAVYMTKADGTYVVRTVQELLPVSFGPEDLQKI