Details from NCBI annotation

Gene Symbol Sdc2
Gene Name syndecan 2
Entrez Gene ID 101710212

Database interlinks

Part of NW_004624763.1 (Scaffold)

For more information consult the page for NW_004624763.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SDC2 ENSCPOG00000010317 (Guinea pig)

Gene Details

syndecan 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009265, Guinea pig)

Protein Percentage 84.13%
CDS Percentage 83.81%
Ka/Ks Ratio 0.2413 (Ka = 0.1101, Ks = 0.4561)

SDC2 ENSG00000169439 (Human)

Gene Details

syndecan 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000307046, Human)

Protein Percentage 85.5%
CDS Percentage 86.0%
Ka/Ks Ratio 0.17383 (Ka = 0.0778, Ks = 0.4473)

Sdc2 ENSMUSG00000022261 (Mouse)

Gene Details

syndecan 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022871, Mouse)

Protein Percentage 79.0%
CDS Percentage 80.33%
Ka/Ks Ratio 0.18499 (Ka = 0.126, Ks = 0.6809)

Sdc2 ENSRNOG00000004936 (Rat)

Gene Details

syndecan 2 (Sdc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007255, Rat)

Protein Percentage 76.72%
CDS Percentage 81.13%
Ka/Ks Ratio 0.25547 (Ka = 0.1384, Ks = 0.5416)

Genome Location

Sequence Coding sequence

Length: 627 bp    Location: 3893218..3919339   Strand: +
>XM_004850290.1
ATGAGGAGATGGGTAATTTTAACTGTAGGAATTCTGGAGGTCTTAGGATGTGTGCCAACTCTGAAACCTGAACCAAAGAGAGCAGAGCTGACATCTGATAAAGACATGTACCTTGACAACAGTTCCATTGAAGATGCATCGGGCGTGTACCCCATTGATGATGACGACTATGCTTCTGCCTCTGGCTCGGGAGCTGATGAGGACATAGAGAGTCCAGAGCTGACAACATCTCGACCACTGCTTCCAAAGATACCATTTACTAGTGTTACTCCCAAAGTGGAAACCACAACACTGAAGACACACAACAAGATGCCTGCTCAGACGAAGTCACCTGAAGAAATTGATAAAGGGGAAGTTCACCTCTCTGACACAGAAAAGAAAATGAACCCAGCTGAAGAGAATAAAAACGTGTACACTGAGAAACACTCAGACAATCTGTTTAAACGCACAGAAGTTCTAGCAGCTGTCATCGCTGGCGGAGTTATTGGCTTCCTCTTTGCGATTTTCCTCATCCTGCTGTTGGTGTACCGCATGAGAAAGAAGGATGAAGGGAGCTACGACCTTGGGGAGCGCAAACCATCCAGCGCTGCTTACCAGAAGGCACCTACTAAGGAGTTTTACGCATAA

Related Sequences

XP_004850347.1 Protein

Sdc2 PREDICTED: syndecan-2 [Heterocephalus glaber]

Length: 208 aa      View alignments
>XP_004850347.1
MRRWVILTVGILEVLGCVPTLKPEPKRAELTSDKDMYLDNSSIEDASGVYPIDDDDYASASGSGADEDIESPELTTSRPLLPKIPFTSVTPKVETTTLKTHNKMPAQTKSPEEIDKGEVHLSDTEKKMNPAEENKNVYTEKHSDNLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA