Details from NCBI annotation

Gene Symbol Atp6v1c1
Gene Name ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1, transcript variant X2
Entrez Gene ID 101721955

Database interlinks

Part of NW_004624763.1 (Scaffold)

For more information consult the page for NW_004624763.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP6V1C1 ENSCPOG00000009966 (Guinea pig)

Gene Details

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008944, Guinea pig)

Protein Percentage 97.38%
CDS Percentage 91.36%
Ka/Ks Ratio 0.02275 (Ka = 0.0116, Ks = 0.5099)

ATP6V1C1 ENSG00000155097 (Human)

Gene Details

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1

External Links

Gene Match (Ensembl Protein ID: ENSP00000379203, Human)

Protein Percentage 98.17%
CDS Percentage 84.55%
Ka/Ks Ratio 0.00813 (Ka = 0.0089, Ks = 1.0969)

Atp6v1c1 ENSMUSG00000022295 (Mouse)

Gene Details

ATPase, H+ transporting, lysosomal V1 subunit C1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022904, Mouse)

Protein Percentage 97.12%
CDS Percentage 85.08%
Ka/Ks Ratio 0.01246 (Ka = 0.0138, Ks = 1.1035)

Atp6v1c1 ENSRNOG00000004846 (Rat)

Gene Details

ATPase, H+ transporting, lysosomal V1 subunit C1 (Atp6v1c1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006917, Rat)

Protein Percentage 96.86%
CDS Percentage 85.51%
Ka/Ks Ratio 0.01514 (Ka = 0.0151, Ks = 0.9961)

Genome Location

Sequence Coding sequence

Length: 1149 bp    Location: 19726900..19769247   Strand: +
>XM_004850242.1
ATGACTGAGTTCTGGCTCATCTCGGCTCCCGGGGAGAAGACCTGTCAACAGACATGGGAGAAGCTGCACACTGCCACCACCAAGAACAACAACCTTGCTGCCACGTCCAAGTTCAACATCCCTGACTTAAAGGTTGGCACGCTGGACGTGTTGGTTGGCTTGTCGGATGAGCTGGCTAAGCTGGACGCGTTTGTGGAAGGGGTGGTTAAGAAGGTGGCCCAGTACATGGCTGACGTTTTGGAGGACAGTAGAGATAAAGTGCAGGAGAATCTGCTGGCCAATGGAGTCGATTTGGTCACTTACATAACGAGGTTCCAGTGGGACATGGCCAAGTACCCCATCAAGCAGTCTCTGAAGAACATTTCCGAAATAATTGCCAAAGGAGTAACACAGATCGATAATGACCTGAAATCCCGTGCATCCGCATACAACAACCTGAAGGGGAATCTTCAGAACCTGGAGCGGAAGAACGCAGGAAGTTTGCTAACTCGAAGTCTGGCAGAAATCGTGAAGAAGGAGGACTTCGTTCTTGACTCGGAGTATCTTGTCACCTTGCTGGTGGTCGTTCCCAAGTTGAACCACAACGACTGGATCAAGCAGTATGAGACACTGGCCGAGATGGTGGTGCCCAGGTCGAGCAACGTTCTCTCAGAGGACCAAGACAGCTACCTCTGCAATGTCACCCTGTTCAGGAAGGCGGTTGATGACTTCCGACACAATGCCAGGGAGAACAAATTCATCGTTCGAGACTTTCAGTATAACGAGGAGGAGATGAAGGCGGACAAGGAGGAAATGAATCGGCTCTCTACCGACAAGAAGAAGCAGTTCGGACCACTTGTGCGGTGGCTGAAAGTGAATTTCAGTGAAGCATTTATTGCGTGGATTCACGTGAAAGCGTTAAGAGTTTTTGTGGAGTCTGTTCTCAGGTACGGCCTTCCCGTGAACTTCCAGGCAATGCTGCTGCAGCCCAACAAGAAAACCATGAAGAAGCTGCGGGAGGTGCTGCATGAGCTGTACAAGCACCTGGACAGCAGCGCGGCCGCCATCATCGATGCTCCGATGGACATTCCCGGTCTCAACCTGAGCCAGCAGGAATACTACCCCTACGTGTACTACAAGATCGACTGCAACCTGCTGGAGTTCAAGTAG

Related Sequences

XP_004850299.1 Protein

Atp6v1c1 PREDICTED: V-type proton ATPase subunit C 1 isoform X2 [Heterocephalus glaber]

Length: 382 aa      View alignments
>XP_004850299.1
MTEFWLISAPGEKTCQQTWEKLHTATTKNNNLAATSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKEDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHNARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTMKKLREVLHELYKHLDSSAAAIIDAPMDIPGLNLSQQEYYPYVYYKIDCNLLEFK