Details from NCBI annotation

Gene Symbol Sntb1
Gene Name syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
Entrez Gene ID 101715580

Database interlinks

Part of NW_004624763.1 (Scaffold)

For more information consult the page for NW_004624763.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNTB1 ENSCPOG00000005807 (Guinea pig)

Gene Details

syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005237, Guinea pig)

Protein Percentage 89.36%
CDS Percentage 89.36%
Ka/Ks Ratio 0.10954 (Ka = 0.052, Ks = 0.4746)

SNTB1 ENSG00000172164 (Human)

Gene Details

syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)

External Links

Gene Match (Ensembl Protein ID: ENSP00000378965, Human)

Protein Percentage 86.27%
CDS Percentage 85.04%
Ka/Ks Ratio 0.11446 (Ka = 0.0742, Ks = 0.6479)

Sntb1 ENSMUSG00000060429 (Mouse)

Gene Details

syntrophin, basic 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041294, Mouse)

Protein Percentage 84.53%
CDS Percentage 81.5%
Ka/Ks Ratio 0.08432 (Ka = 0.0824, Ks = 0.9767)

Sntb1 ENSRNOG00000004821 (Rat)

Gene Details

syntrophin, beta 1 (Sntb1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006423, Rat)

Protein Percentage 84.33%
CDS Percentage 81.56%
Ka/Ks Ratio 0.08917 (Ka = 0.0835, Ks = 0.9363)

Genome Location

Sequence Coding sequence

Length: 1554 bp    Location: 18528830..18310894   Strand: -
>XM_004850225.1
ATGGCGCTAGCGGCGGCGGGCGGCGGGGGCGGCCGGGCGCGGCGCAGCGGGCTGCTGGAAGTTTCGGTGCGCGACCGCTGGCACAAAGTTCTGGTGAACTTGGGCGAGGACGCGCTGGTGCTGAGCGGCGAGGCGGGCGCGGCGGCGCACAACGGGCCGGGGGCGGCGGCGCAGGGCACGCGGGGCGCGGGCGCGGGCCCCCCCGAGTGCCCGGCCGGGGTGCGCCCCGCCGGCCCCGCCGCGCCCGAGCCTGTGTGCAGCCAGAAGCGCGGCGTGAAGGTGCTGAAGCAGGAGCTGGGCGGTCTGGGCATCAGCATCAAGGGCGGCCGCGAGAACCGCATGCCCATCCTCATCAGCAAGATCTTCAAGGGGCTGGCGGCCGACCAGACCCAGGCCCTGTACGTGGGCGACGCCATCCTGTCGGTGAACGGCGCCGACCTGCGGGACGCCACGCACGACGAGGCGGTGCAGGCGCTGAAGCGCGCGGGTCGCGAGGTGCTGCTGGAAGTGAAGTACATGCGCGAAGCCACGCCCTACGTGAAGAAGGGCTCCCCGGTGTCAGAGATCGGCTGGGAGACACCGCCCCCCGAGTCCCCGCGGTTGGGGGGCGGCTCCTCGGACCCGCAGTCCTCGCAGGCCTTCTGCTTCCACCCAGACCAGAAGAGCATCCCGCTGAGGATGTGCTACGTCACGCGGAGCCTGGCCCTGGCGGACCCCGAGAACAGGCAGTTTGAGATCCACTCCCCAGACACCAAGCACACGGTGGCCCTCAGGAGCAAGGACTCAGCCACCGCCCAGGCCTGGTTCAGCGCCATCCACGCCAACGTGAGCGACCTGCTGCCCAGCGTGATCAGCGAGGTCAGAGAGCAGCTGGGGAAGGTGGGCCTCGTTGGGGGTCATGAGATTCGGCACCTGGGCTGGCTCGCCGAAAAGGTGCCCGGGGACAGCGGGAGGCAGTGGAAGCCAGCCCTGGTCGTCCTGACGGAGAAGGACCTCTTGGTGTATGACAGCATGCCGAGGAGGAAGGAGGCCTGGCTCAGCCCCGCGCACTCCTACCCTCTCCTTGCCACCAGGCTAGTCCATTCGGGGCCTGGGAAGGGCTCACCCCAGGCCGGTCTGGAGCTGTCCTTTGCAACACGAACTGGCACCAAGCAAGGAATTGAAACCCATCTCTTCCGGGCAGAGGTCAGCAAGGACCTCTCCCAGTGGACAAGGAGCATAGTGCAGGGATGCCACAACTCAGCTGAGCTCATTGCTGAAGTCACCACTGCTTGCACCTACAAAAACCAGGAGTGTCGCTTGACTGTGCATTATGAGAATGGATTTACTGTTACCACTGAGCCACAGGAGGGTGCCTCTCCCAAGACAATCATACAGTCGCCTTATGAGAAGCTCAAAATGTCTTCAGACGATGGGACCCGGATGCTGTATTTAGACTTTGGAGGCAAAGAAGGCGAGATTCAACTGGACCTTCATTCCTGCCCCAAGCCAATTGTTTTCATCATTCATTCCTTCCTGTCAGCTAAGATTGCAAGACTTGGCTTGGTGGCTTGA

Related Sequences

XP_004850282.1 Protein

Sntb1 PREDICTED: beta-1-syntrophin [Heterocephalus glaber]

Length: 517 aa      View alignments
>XP_004850282.1
MALAAAGGGGGRARRSGLLEVSVRDRWHKVLVNLGEDALVLSGEAGAAAHNGPGAAAQGTRGAGAGPPECPAGVRPAGPAAPEPVCSQKRGVKVLKQELGGLGISIKGGRENRMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQALKRAGREVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGGSSDPQSSQAFCFHPDQKSIPLRMCYVTRSLALADPENRQFEIHSPDTKHTVALRSKDSATAQAWFSAIHANVSDLLPSVISEVREQLGKVGLVGGHEIRHLGWLAEKVPGDSGRQWKPALVVLTEKDLLVYDSMPRRKEAWLSPAHSYPLLATRLVHSGPGKGSPQAGLELSFATRTGTKQGIETHLFRAEVSKDLSQWTRSIVQGCHNSAELIAEVTTACTYKNQECRLTVHYENGFTVTTEPQEGASPKTIIQSPYEKLKMSSDDGTRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKIARLGLVA