Sequence details NCBI ID: XM_004850222.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Col14a1
Gene Name collagen, type XIV, alpha 1
Entrez Gene ID 101714283

Database interlinks

Part of NW_004624763.1 (Scaffold)

For more information consult the page for NW_004624763.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COL14A1 ENSCPOG00000008500 (Guinea pig)

Gene Details

collagen, type XIV, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007641, Guinea pig)

Protein Percentage 90.09%
CDS Percentage 86.75%
Ka/Ks Ratio 0.10291 (Ka = 0.0535, Ks = 0.5201)

COL14A1 ENSG00000187955 (Human)

Gene Details

collagen, type XIV, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000297848, Human)

Protein Percentage 87.79%
CDS Percentage 83.34%
Ka/Ks Ratio 0.09818 (Ka = 0.0663, Ks = 0.6748)

Col14a1 ENSMUSG00000022371 (Mouse)

Gene Details

collagen, type XIV, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105850, Mouse)

Protein Percentage 87.35%
CDS Percentage 82.11%
Ka/Ks Ratio 0.08566 (Ka = 0.0686, Ks = 0.8013)

Col14a1 ENSRNOG00000026415 (Rat)

Gene Details

collagen alpha-1(XIV) chain precursor

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063778, Rat)

Protein Percentage 85.67%
CDS Percentage 81.13%
Ka/Ks Ratio 0.10401 (Ka = 0.0837, Ks = 0.8049)

Genome Location

Sequence Coding sequence

Length: 5385 bp    Location: 17982646..18172714   Strand: +
Raw sequence   
>XM_004850222.1
ATGAAGATTCTTCAGTGCAAGATGCGGTACTGGCTGATTCCAGCTTGCGTGGCAGCTGCTTATTTCTGCAGCGTCGTCCAAGGTCAAGTGTCTGCTCCCACGAGGCTGAGATACAATGTGCTGTCTGAGGACAGTGTTCAGATCTCCTGGAAAGCTCCCCGGGGGAAGTTCGGTGGATACAAACTTCTGGTGACTCCAGCTTCAGGAGGAAAAACCAATCAGCTGAATCTCCAAAACACTGCAACTAAAGCAATTATTCAAGGTCTTATGCCGGAGCAGAACTACACAGTTCAAATTATTGCATACCACAAAGACAAGGAGAGCAAGCCGGTGCAAGGCCAGTTCAGAATTAAAGATTTAGAAAAAAAGAAGGATCCGACAAAGCCCAGAGGCAAGGCCGTGGACAAAGCAAATGGGACGAGCCAGGCTTTGCCAGAAGAAGCGAAGTTCATGTGCCCGAGCCCGGCGCTCGCCGACATCGTCATCCTGGTGGACGGCTCCTGGAGCATCGGCAGGTTTAACTTCAGGCTGGTTCGGCTCTTCCTGGAAAATCTGGTCACGGCCTTCAACGTGGGCTCCGGGAGGACTCAGATCGGTCTTTCTCAGTACAGTGGTGACCCCAGGATAGAGTGGCACCTGAACGCCTTCAGCACTAAAGACGAAGTCATCGACGCCGTGCGCAATCTTCCATACAAAGGGGGAAACACGCTGACCGGCCTTGCTTTGAACTACATTTTTGAAAACAACTTTAAACCCGAAGCAGGATCGAGGACGGGAGTGGCCAAAGTCGGCATTCTGATCACAGACGGAAAGTCTCAGGATGACGTCGTCCCGGCCTCGCGGAGGCTGCGGGAGTCCGGAGTGGAGCTCTTTGCAGTAGGCGTGAAGAACGCGGACCTGAATGAGCTGCAGGAGATCGCCTCGGAGCCCGACAGCACCCACGTGTACAACGTGGCTGAGTTCGATCTGATGCACACAGTGGTGGAGAGTCTGACCAGGACGGTGTGCTCCGGGATGGAGGAGCAGGACCGGGAGATCAAAGCTTCAGCCCTTGCCACCACGGGGCCACCGACGGAGCTGATTACGTCTGAAGTCACCGCCAGGAGCTTTATGGTTAACTGGACGCATGCCCCAGGCCACGTGCAGAAATACAGGGTCGTGTATTACCCTACCCGAGGGGGAAAACCGGAAGAGGTGGTGGTGGACAGAAGTGTATCTTCCCTGGTCCTGAAAAACTTGATGTCTTTAACTGAATACCAGATAGCGGTCTTTGCCATCTATGCCCACACTGCCAGCGAAGGCCTTCGGGGCACGGAGACGACACTTGCTCTGCCTGTGGCTTCCGACCTTGAGCTGTATGGTGTGACGGAGAACAGCCTGCGCGTCAAGTGGGACCCAGTGCCGGGGGCCACGGGGTACCTGCTCCTCTACGCGCCTCTCACGGAGGGGCTGGCTGGGGATGAGAAAGAGATGAAAATTGGAGAAACCCTCACAGACATCGAGTTGACCGGGTTGGTCCCCAACACGGAATACACTGTCACGGTTTACGCAATGTTTGGGGAGGAGGCCAGTGACCCTGTCACGGGACAGGAGACGACACTACCTTTAACTCCACCGAGCAACCTGAGAATCTCCAATGTGGGCTCCAACAGTGCTCGATTGTCCTGGGACCCAAGCTCCAGAAAGATCAGCGGTTACCGCATTGTCTACACCAGCGCAGATGGCACTGAAATCAATGAGGTTGAGGTTGACCCCATCACCACGTTCCCTCTGAAAGGCCTGACCCCGGTCACCGAGTATTCCGTTGCCATTTTCTCCATCTATGACGAAGGGCAGTCTTTGCCTCTGGCTGGAACTTTCACCACAGAGGAAGTCCCAGCCCAGCAGTACTTGGAAATCGATGAGGTGAAGACAGACAGCTTCAGAGTGACCTGGCACCCGCTCTCGGCTGAGGAGGGTCAGCACAAGCTGATGTGGATTCCGGTCTACGGGGGAAAGACCCAAGAGGTGGTCCTTAAGGAGGAGCAGGACTCCTATGTCATCGAGGGCCTGGATCCTGGCACTGAGTATGAAGTTTCGCTCCTGGCTGTGCTGGACGACGGCAGTGAGAGCGAGGTGGTCACAGCCGTGGGGACCACACTTGACAGTTTTTGGACAGAACCAGCCACAACCATAGTACCAGCCACACCTGTAACATCAGTTTTGCAGACAGGAATCAGAAACTTGGTTGTAGATGATGAAACTCCCTCCAGCCTACGGGTGTCGTGGGACATTTCCGACAGCAACGTGGAGCAGTTTAGGGTGACCTACTTGACAGCGCAAGGGGACTCCGTGGAGGAAGTGGTTATGGTGCCTGGAAGCCAGAACAGCGTTCTTCTGAAGCCCCTTCTCGCAGCTACCGAATACAAAGTCACCGTGACACCCATCTACTCAGATGGAGAAGGTGTCAGCGTCTCCGCCCCCGGGAAGACCTCGCCACCCTCTGGTCCCCAAAACTTACGGGTCTCGGAAGAGTGGTACAACCGGCTTCGCATCACATGGGACCCCCCGCCCGGCCCCATAAAGGGCTACAGGATCGTCTACAGACCCGTCAGTGTTCCTGGCCCGACTCTGGAAACTTTTGTGGGTGCTGACATTCACACCATCCTTATCACCAACCTCCTCAGTGGAATGGACTACAGCGTGAAGATCTTCGCCTCCCAGGCCAAGGGCTTCAGCGACGCCCTGACGGGCCTGGTGAAAACACTGTTCTTGGGTGTGACTGAGCTCCAAGCCCACCAGGTGGAAATGACCAGCTTGTGTGCTCAGTGGCAAGTGCATCGCCATGCCACAGCCTACAGGATCGTCGTAGAAAACATCCAGGATACACAAAAGCAAGAATCCACTGTGGGAGGAGGGACAAACAGACACTGTTTCTATGGACTTCAGCCTGATTCCGAGTATAAAATCAGCATTTACACCAAGCTGCAGGAGCTGGAGGGGCCGAGTGTGAGCATAGTCGAGAAAACACGGTCCCGGCCTACTCAGCCACCGACGTCCCCTCCAACCATCCCACCTGCCAGAGAAGTGTGTAAAGCTGCCAGGGCAGACCTGGTGTTCATGGTGGACGGGTCCTTCAGCATTGGGGACGACAATTTCAACAAGATCATCAACTTCCTGTACAGCACCGTGGGAGCCCTGGGCAGGATTGGCGCAGATGGAACTCAAGTGGCGATCGTTCAGTTTACAGATGACCCCAGGACAGAATTCAAACTAAATGCTTACAAAACCAAAGAGACGCTTCTTGACTCCATTAAACGCATTTCCTACAAAGGGGGAAACACAAAAACAGGAAAGGCAATGAAACATGTCCGGGACACCTTGTTCACCGCAGAGGCAGGAATGCGAAGAGGCGTTCCCAAGGTCATCGTGGTGATAACCGACGGCCGGTCGCAGGACGAGGTGGACAGCGTCTGCAGGGAGATGCAGGTGGACGGCTACAGTATCTTTGCAGTCGGTGTGGCTGACGCAGATTACTCAGAGTTGCTCAGCATTGGCAGCAAGCCCAGCGCCCGCCACGTTTTCTTTGTGGATGACTTTGACGCCTTCAAGAAAATTGAAGATGAATTAATTACTTTTGTCTGTGAAGCTGCCTCCGCAACCTGTCCAATGGTGCACAAGGATGGCACTGATGTTGCAGGATTTAAGATGATGGAAATGTTTGGTTTGGTTGAAAAGGAATTTTCATCGGTGGAAGGGGTTTCTATGGAGCCTGGTACCTTCAACGTGTATCCGTGTTACCAACTGCACAAAGATGCCCTGGTCTCCCAGCCAACCAGGTATTTACATCCGGGAGGATTGCCTTCTGACTACACAATCAGTTTTCTCTTCCGAATTCTTCCCAACACTCCCCAGGAGCCCTTTGCCCTTTGGGAAATTTTAAATAAAAATTCGGACCCATTGGTTGGGGTCATTTTAGATAATGGTGGGAAAACTCTAACATATTTCAACTATGACCACACTGGGGATTTTCAAACCGTCACTTTTGAAGGACCTGAAATTAGGAAGATTTTCTACGGGAGCTTTCACAAGCTGCACGTGGTCGTCAATAAGACTTTGGTCAAAGTGGTTGTTGACTGCAAGCAAATGGGTGAGAAGGCAATAAATGTATCAGCTAATATCACATCGGACGGAGTAGAAGTCCTGGGGAGAATGGTTCGGTCGAGAGGACCAAATGGAAGTTCCGCACCATTCCAGTTGCAGATGTTTGATATCCTTTGTTCCACTTCCTGGGCCAGTAGAGACAAATGCTGTGAGCTTCCAGGCCTGAGGGACGACCAGGCCTGCCCCAACGTGCCCCATTCCTGCGCCTGTTCACAAACCAACGAAGTGGCCCTGGGACCAGTGGGCCCACCGGGTGGTCCGGGACTCCGTGGACCGAAGGGCCAACAAGGTGAACAGGGTCTAAAGGGACCAGAGGGCCCTCGGGGTGAATCAGGCCCTGCAGGACCGCAGGGGCCTCCAGGTCCCCAAGGACCGAGTGGTCTGTCCATTCAGGGAATGCCGGGAATGCCGGGCGAGAAAGGAGAGAAAGGAGATACCGGCCTTCCAGGGCCACAGGGAGTCCCAGGAGGCGTGGGCTCACCAGGACGAGATGGCTCCCCCGGCCAACGGGGGTTTCCCGGAAAGGACGGTTCCTCCGGCCCACCAGGACCCCCAGGGCCAATTGGCATCCCCGGAGCGCCGGGAGTCCCCGGGGTCACGGGCAGCGTGGGACCGCAAGGCGCCCTGGGCCCTCCCGGTGTCCCTGGAGCAAAGGGAGAGAGAGGCGAACGAGGTGACCTGCAGTCTCAAGCCATGGTGAGGGCAGTGGCGCGGCAAGTGTGTGAGCAGCTCATCCAAAATCACATGGCCAGGTACGCTGCCGTCCTCAACCAGATCCCCAGCCACTCTTCATCCACCCGCACCGTCCAGGGGCCTCCCGGGGAGCCCGGACGGCCTGGCTCACCCGGAACCCCCGGGGAACAAGGGCCCCCCGGTGCCCCTGGCTTCCCAGGAAACACAGGCTTGCCGGGGACCCCAGGAGAACGAGGTCTAACTGGTCTCAAGGGAGAGAAAGGAAATCCAGGCATCGGAACTCAAGGTCCAAGAGGCCCCCCAGGACCAGCAGGACCTTCAGGGGAGAGTCGGCCTGGCAGCCCTGGGGCCCCCGGCTCTCCTGGACCACGGGGTCCCCCGGGGCACCTGGGGGTGCCAGGGCCACAAGGTCCTTCCGGCCAGCCTGGATATTGCGACCCCTCGTCGTGTTCTGCCTATGGTGTGGGAGCCCCCCATCCAGATGAGCCTGAATTCACCCCTGTCCAAGACGAGCAGGAAGCCTTGGAATTGTGGGGCTCCGGGATCTAA

Related Sequences

XP_004850279.1 Protein

Col14a1 PREDICTED: collagen alpha-1(XIV) chain [Heterocephalus glaber]

Length: 1794 aa      View alignments
>XP_004850279.1
MKILQCKMRYWLIPACVAAAYFCSVVQGQVSAPTRLRYNVLSEDSVQISWKAPRGKFGGYKLLVTPASGGKTNQLNLQNTATKAIIQGLMPEQNYTVQIIAYHKDKESKPVQGQFRIKDLEKKKDPTKPRGKAVDKANGTSQALPEEAKFMCPSPALADIVILVDGSWSIGRFNFRLVRLFLENLVTAFNVGSGRTQIGLSQYSGDPRIEWHLNAFSTKDEVIDAVRNLPYKGGNTLTGLALNYIFENNFKPEAGSRTGVAKVGILITDGKSQDDVVPASRRLRESGVELFAVGVKNADLNELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSGMEEQDREIKASALATTGPPTELITSEVTARSFMVNWTHAPGHVQKYRVVYYPTRGGKPEEVVVDRSVSSLVLKNLMSLTEYQIAVFAIYAHTASEGLRGTETTLALPVASDLELYGVTENSLRVKWDPVPGATGYLLLYAPLTEGLAGDEKEMKIGETLTDIELTGLVPNTEYTVTVYAMFGEEASDPVTGQETTLPLTPPSNLRISNVGSNSARLSWDPSSRKISGYRIVYTSADGTEINEVEVDPITTFPLKGLTPVTEYSVAIFSIYDEGQSLPLAGTFTTEEVPAQQYLEIDEVKTDSFRVTWHPLSAEEGQHKLMWIPVYGGKTQEVVLKEEQDSYVIEGLDPGTEYEVSLLAVLDDGSESEVVTAVGTTLDSFWTEPATTIVPATPVTSVLQTGIRNLVVDDETPSSLRVSWDISDSNVEQFRVTYLTAQGDSVEEVVMVPGSQNSVLLKPLLAATEYKVTVTPIYSDGEGVSVSAPGKTSPPSGPQNLRVSEEWYNRLRITWDPPPGPIKGYRIVYRPVSVPGPTLETFVGADIHTILITNLLSGMDYSVKIFASQAKGFSDALTGLVKTLFLGVTELQAHQVEMTSLCAQWQVHRHATAYRIVVENIQDTQKQESTVGGGTNRHCFYGLQPDSEYKISIYTKLQELEGPSVSIVEKTRSRPTQPPTSPPTIPPAREVCKAARADLVFMVDGSFSIGDDNFNKIINFLYSTVGALGRIGADGTQVAIVQFTDDPRTEFKLNAYKTKETLLDSIKRISYKGGNTKTGKAMKHVRDTLFTAEAGMRRGVPKVIVVITDGRSQDEVDSVCREMQVDGYSIFAVGVADADYSELLSIGSKPSARHVFFVDDFDAFKKIEDELITFVCEAASATCPMVHKDGTDVAGFKMMEMFGLVEKEFSSVEGVSMEPGTFNVYPCYQLHKDALVSQPTRYLHPGGLPSDYTISFLFRILPNTPQEPFALWEILNKNSDPLVGVILDNGGKTLTYFNYDHTGDFQTVTFEGPEIRKIFYGSFHKLHVVVNKTLVKVVVDCKQMGEKAINVSANITSDGVEVLGRMVRSRGPNGSSAPFQLQMFDILCSTSWASRDKCCELPGLRDDQACPNVPHSCACSQTNEVALGPVGPPGGPGLRGPKGQQGEQGLKGPEGPRGESGPAGPQGPPGPQGPSGLSIQGMPGMPGEKGEKGDTGLPGPQGVPGGVGSPGRDGSPGQRGFPGKDGSSGPPGPPGPIGIPGAPGVPGVTGSVGPQGALGPPGVPGAKGERGERGDLQSQAMVRAVARQVCEQLIQNHMARYAAVLNQIPSHSSSTRTVQGPPGEPGRPGSPGTPGEQGPPGAPGFPGNTGLPGTPGERGLTGLKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGAPGSPGPRGPPGHLGVPGPQGPSGQPGYCDPSSCSAYGVGAPHPDEPEFTPVQDEQEALELWGSGI