Details from NCBI annotation

Gene Symbol Colec10
Gene Name collectin sub-family member 10 (C-type lectin)
Entrez Gene ID 101709852

Database interlinks

Part of NW_004624763.1 (Scaffold)

For more information consult the page for NW_004624763.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COLEC10 ENSCPOG00000001415 (Guinea pig)

Gene Details

collectin sub-family member 10 (C-type lectin)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001279, Guinea pig)

Protein Percentage 91.7%
CDS Percentage 91.1%
Ka/Ks Ratio 0.13877 (Ka = 0.0398, Ks = 0.2867)

COLEC10 ENSG00000184374 (Human)

Gene Details

collectin sub-family member 10 (C-type lectin)

External Links

Gene Match (Ensembl Protein ID: ENSP00000332723, Human)

Protein Percentage 89.53%
CDS Percentage 88.45%
Ka/Ks Ratio 0.1563 (Ka = 0.0587, Ks = 0.3758)

Colec10 ENSMUSG00000038591 (Mouse)

Gene Details

collectin sub-family member 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037867, Mouse)

Protein Percentage 87.73%
CDS Percentage 84.96%
Ka/Ks Ratio 0.10659 (Ka = 0.0653, Ks = 0.6122)

Colec10 ENSRNOG00000008591 (Rat)

Gene Details

collectin sub-family member 10 (C-type lectin) (Colec10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011379, Rat)

Protein Percentage 88.45%
CDS Percentage 86.28%
Ka/Ks Ratio 0.12449 (Ka = 0.0635, Ks = 0.5097)

Genome Location

Sequence Coding sequence

Length: 834 bp    Location: 17302076..17350173   Strand: +
>XM_004850209.1
ATGAATGGCACTGGAGTTTTGCTTCAAAGCAACCAGTTCATCCTCCTGCTGCTATTTCTCCTGCAAATTCAGAGTCTGGGTCTGGATGTTGATAGTCGCCCGACTGCAGAAGTCTGTACCACCCACACCATTTCAACTGGACCCAAAGGAGATGATGGTGAAAAAGGAGATCCAGGAGAAGAGGGAAAAGATGGCAAAGTGGGACGCAGGGGGCCGAAAGGAATTAAAGGAGAATTGGGTGACATAGGACCCCAGGGCATTATTGGCAAGTCGGGGCCCTTTGGCAAGAAGGGTGACAAAGGAGAGAAGGGTTTGCTTGGGATACCTGGAATGAAAGGCAAGGCAGGTACTGTCTGTGATTGTGGGAGATACCGGAAAGTTGTTGGACAACTGGATATTAGTGTGGCCCGGCTCAAGTCATCTATGAAATTCGTCAAGAATGTCATAGCAGGGATTAGGGAAACTGAAGAGAAGTTCTACTACATCGTGCAGGAGGAGAAGAGCTACAGGGAATCCCTGACCCACTGCAGGATTCGGGGTGGAATGCTAGCCATGCCCAAAGATGAAGCCGTCAACAGCCTCATCGCTGACTATGTGGCCAAGAGTGGCTTCTTCCGCGTGTTCATTGGGGTGAACGACCTCGAGAAGGAGGGCCAGTATGTGTTCACGGACAACACCCCACTGCAGAACTACAGCAACTGGCAGAAGGGGGAGCCCAGTGACCCCTATGGGCACGAGGACTGTGTGGAGATGCTGAGCTCAGGCCGGTGGAATGACACGGAATGCCATCTTACCATGTACTTCATCTGCGAGTTTGTCAAGAAGAAAAAGTAA

Related Sequences

XP_004850266.1 Protein

Colec10 PREDICTED: collectin-10 [Heterocephalus glaber]

Length: 277 aa      View alignments
>XP_004850266.1
MNGTGVLLQSNQFILLLLFLLQIQSLGLDVDSRPTAEVCTTHTISTGPKGDDGEKGDPGEEGKDGKVGRRGPKGIKGELGDIGPQGIIGKSGPFGKKGDKGEKGLLGIPGMKGKAGTVCDCGRYRKVVGQLDISVARLKSSMKFVKNVIAGIRETEEKFYYIVQEEKSYRESLTHCRIRGGMLAMPKDEAVNSLIADYVAKSGFFRVFIGVNDLEKEGQYVFTDNTPLQNYSNWQKGEPSDPYGHEDCVEMLSSGRWNDTECHLTMYFICEFVKKKK