Details from NCBI annotation

Gene Symbol Nyx
Gene Name nyctalopin
Entrez Gene ID 101706632

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NYX ENSCPOG00000010847 (Guinea pig)

Gene Details

nyctalopin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009742, Guinea pig)

Protein Percentage 82.95%
CDS Percentage 85.33%
Ka/Ks Ratio 0.12704 (Ka = 0.0899, Ks = 0.7078)

NYX ENSG00000188937 (Human)

Gene Details

nyctalopin

External Links

Gene Match (Ensembl Protein ID: ENSP00000340328, Human)

Protein Percentage 81.72%
CDS Percentage 85.92%
Ka/Ks Ratio 0.1336 (Ka = 0.0965, Ks = 0.7226)

Nyx ENSMUSG00000051228 (Mouse)

Gene Details

nyctalopin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056313, Mouse)

Protein Percentage 80.25%
CDS Percentage 82.07%
Ka/Ks Ratio 0.10145 (Ka = 0.1108, Ks = 1.0924)

Nyx ENSRNOG00000009646 (Rat)

Gene Details

nyctalopin (Nyx), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013382, Rat)

Protein Percentage 79.83%
CDS Percentage 81.58%
Ka/Ks Ratio 0.1116 (Ka = 0.1143, Ks = 1.0244)

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location: 14183611..14157116   Strand: -
>XM_004850077.1
ATGCTGGTCCTGCTTCTGAATGCGGTGGTCCTCGGCCTGCCCAGCACCCGGGCCACCGAGTCCTGCTTGCACGCCTGCCCGGTCCCCTGCAGCTGCAGCAAAGCGGAGCGCGGCTGCACGGTGCGCTGTGACCGCGCGGGCCTCCTGCGGGTGCCCGCTGATTTCCCGTGCGAGACGGACTCCATCGACCTGGACCACAACGGCCTGCGCATCCTGGGTGAGCGCGTCTTTGGCGCGTTGCCGTCGCTGCGTCGCCTGTCGCTGCGCCACAACAACCTTTCCTTCATCACGCCCGGCGCCTTCAAGGGCCTGCCGCGGCTGGCCGAGCTGTGCCTGGCGCACAATGGCAACCTGCGCTACCTGCACGCGCGCACCTTCGCCGCGCTCGGCCGCCTCCGTCACCTCGACCTGGCCGCCTGTCGCCTGTTTAGCGTGCCCGAGCGCCTGCTGGCCGAGCTGCCGGCCCTGCACGAGCTCATCGCCTTCGATAACCTGTTCCGCCTCGTGCCGGGCGCGCTGCGCGGCCTGGCCAACCTGACACATGCCCACCTGGAGCGCGGCCGCATCGAGGCGGTGGCCTCGAGCTCGCTGCAGGGCCTGCAGCGGCTGCGCTCGCTCAGCCTGCAGGCCAACCGCATCCGCGCTGTGCACGCCAGGGCCTTTAGGGACTGCGGTGCCCTGGAGCACCTGTTGCTCAACGACAACCTGCTGGCTGTGCTGCCGGCCGACGCCTTCCTCGGCCTGCGCAGACTCCGCACACTCAACCTGGGTGGCAACAGGCTGGGCGGTGTGGTGCGCTCCTGGTTCACCGACATGGCTGAGCTGGAGCTGCTCTACCTGGACCGCAACAGCATCGCCTTCGTGGAAGAGGGCGCCTTCCAGAACCTCTCGGGTCTCCTGGCACTGCACCTCAATGGCAACGGCCTCACCGTGCTCTCCTGGGCCGCCTTCCAGCCCAGCTTCTTCCTGGGGCGCCTCTTCCTCTTCCGCAACCCGTGGCGCTGCGACTGCCACCTGGAGTGGCTGCGGGACTGGATAGAGGTCTCTGGTCTTGTCGCCGAAGTGCCATGCGCCTCTCCAGGCTCCGTGGCCGGCCTGGACCTCAGCCAGGTAGTCTTCGTGCGCTCCTCCGATGGCCTGTGCGTGGACCCCGTGGAGTTGAACCTCTCGGCGTCTAGTCCAGGCCCATCCCTGGAGCCAGTGGCCACCACCGTGAGCAGATTCGGTAGCCTCCTCTCCAAGCTGCTGGCCCCGAGGGTACTGGTGGAGGAGGTGACCAACTCTACAGCCAGGCTGGCCAACGCCTCACTGTCCTATACCCTTCCCTCCCGTGGGGTTGGAAACTTGGGCCACAAGGACACGTTTCTCTTTGCCTCTTGTGTTCTGCTAGGTGTGTCCCAGTATGTGACATTTTGCTTATGGAGAGACTGA

Related Sequences

XP_004850134.1 Protein

Nyx PREDICTED: nyctalopin [Heterocephalus glaber]

Length: 476 aa      View alignments
>XP_004850134.1
MLVLLLNAVVLGLPSTRATESCLHACPVPCSCSKAERGCTVRCDRAGLLRVPADFPCETDSIDLDHNGLRILGERVFGALPSLRRLSLRHNNLSFITPGAFKGLPRLAELCLAHNGNLRYLHARTFAALGRLRHLDLAACRLFSVPERLLAELPALHELIAFDNLFRLVPGALRGLANLTHAHLERGRIEAVASSSLQGLQRLRSLSLQANRIRAVHARAFRDCGALEHLLLNDNLLAVLPADAFLGLRRLRTLNLGGNRLGGVVRSWFTDMAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNGLTVLSWAAFQPSFFLGRLFLFRNPWRCDCHLEWLRDWIEVSGLVAEVPCASPGSVAGLDLSQVVFVRSSDGLCVDPVELNLSASSPGPSLEPVATTVSRFGSLLSKLLAPRVLVEEVTNSTARLANASLSYTLPSRGVGNLGHKDTFLFASCVLLGVSQYVTFCLWRD