Sequence details NCBI ID: XM_004849993.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ndp
Gene Name Norrie disease (pseudoglioma), transcript variant X2
Entrez Gene ID 101723959

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NDP ENSCPOG00000005817 (Guinea pig)

Gene Details

Norrie disease (pseudoglioma)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005245, Guinea pig)

Protein Percentage 98.5%
CDS Percentage 94.99%
Ka/Ks Ratio 0.03406 (Ka = 0.0068, Ks = 0.2004)

NDP ENSG00000124479 (Human)

Gene Details

Norrie disease (pseudoglioma)

External Links

Gene Match (Ensembl Protein ID: ENSP00000367301, Human)

Protein Percentage 96.24%
CDS Percentage 92.48%
Ka/Ks Ratio 0.05219 (Ka = 0.0168, Ks = 0.3217)

Ndp ENSMUSG00000040138 (Mouse)

Gene Details

Norrie disease (pseudoglioma) (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046692, Mouse)

Protein Percentage 97.71%
CDS Percentage 93.89%
Ka/Ks Ratio 0.04364 (Ka = 0.0105, Ks = 0.2405)

Genome Location

Sequence Coding sequence

Length: 402 bp    Location: 11409951..11435709   Strand: +
Raw sequence   
>XM_004849993.1
ATGAGAAATCATGTACTAGCTGCATCCCTTTCCATGCTCTCCCTGCTGGCCATAATGGGAGACACAGACAGCAAAACAGACAGCTCCTTCATGATGGACTCAGACCCTCGACGCTGCATGAGGCACCACTATGTTGATTCTATCAGTCACCCACTGTACAAGTGTAGCTCAAAGATGGTGCTCCTGGCCAGGTGTGAGGGGCACTGCAGCCAGGCATCGCGCTCTGAGCCCTTGGTGTCCTTCAGCACTGTTCTCAAGCAGCCTTTCCGTTCCTCCTGTCACTGTTGCCGGCCCCAGACCTCCAAGCTGAAGGCGCTGCGCCTGCGCTGCTCAGGGGGCATGCGACTCACTGCCACCTACCGGTACATCCTCTCCTGTCACTGTGAGGAATGCAGCTCCTGA

Related Sequences

XP_004850050.1 Protein

Ndp PREDICTED: norrin isoform X2 [Heterocephalus glaber]

Length: 133 aa      
>XP_004850050.1
MRNHVLAASLSMLSLLAIMGDTDSKTDSSFMMDSDPRRCMRHHYVDSISHPLYKCSSKMVLLARCEGHCSQASRSEPLVSFSTVLKQPFRSSCHCCRPQTSKLKALRLRCSGGMRLTATYRYILSCHCEECSS