Sequence details NCBI ID: XM_004849965.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc1a4
Gene Name solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
Entrez Gene ID 101713943

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC1A4 ENSCPOG00000008754 (Guinea pig)

Gene Details

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007859, Guinea pig)

Protein Percentage 91.89%
CDS Percentage 90.57%
Ka/Ks Ratio 0.14755 (Ka = 0.0437, Ks = 0.2965)

SLC1A4 ENSG00000115902 (Human)

Gene Details

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000234256, Human)

Protein Percentage 92.45%
CDS Percentage 89.94%
Ka/Ks Ratio 0.11124 (Ka = 0.0395, Ks = 0.3548)

Slc1a4 ENSMUSG00000020142 (Mouse)

Gene Details

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105223, Mouse)

Protein Percentage 86.6%
CDS Percentage 83.77%
Ka/Ks Ratio 0.10417 (Ka = 0.0727, Ks = 0.698)

Slc1a4 ENSRNOG00000005248 (Rat)

Gene Details

solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (Slc1a4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007002, Rat)

Protein Percentage 85.01%
CDS Percentage 82.29%
Ka/Ks Ratio 0.11339 (Ka = 0.0873, Ks = 0.7698)

Genome Location

Sequence Coding sequence

Length: 1593 bp    Location: 8558890..8532549   Strand: -
Raw sequence   
>XM_004849965.1
ATGGAGAAGAGCAGCGAGACCAACGGCTACTTAGACAGCGCCCAAGCGGGGCCTGCAGGGGGACCCGGCGCCCCGGGGACCGCAGCGGGACGCGCGCGGCGCTGCGCCGGCTTCCTGCGGCGCCACGCGCTGGTGTTGCTCACCGTGTCCGGGGTGCTGGCGGGCGCGGGCTTGGGCGCGGCGCTTCGCAAGCTCAAGCTGAGCCCCACGCAGGTCATCTACCTGGCTTTCCCTGGCGAGATGCTGCTCCGCATGCTGCGCATGATCATCCTGCCGCTAGTGGTCTGCAGCCTGGTGTCTGGGGCTGCCTCTCTCGATGCCAGCTCCCTCGGGAGGCTGGGCGGCATCGCCGTTGCCTACTTTGGCCTCACCACCCTGGGTGCCTCGGCTCTCGCCGTCGCCTTGGCGTTCATCATCAAGCCAGGGTCTGATGCGCAGTCCCTTCAGTCCAGCGGTCTGGACCTGAAGGAGTCGGGGCCTCCGCCCATCCCCAAAGAAACAGTGGACTCTTTCCTCGACCTGGTCAGAAACCTGTTTCCCTCAAATCTTGTGGTTGCATCATTCCGCACATACGCTACCAATTATAATGTGGTCAACCACACCAGCTTTGGAAATGTGTCTGAAAAGATCCCCATTGGTACCGAGATCGAAGGGATGAACATTTTAGGATTGGTCCTTTTTGCCCTAGTCTTAGGAGTGGCCCTTAAGAAACTGGGCTCTGAAGGAGAAGAGCTCATCCGTTTCTTCAGTTCCTTCAACGAGGCAACAATGGTGCTGGTGTCATGGATTATGTGGTATGTACCTGTGGGGATCATGTTCCTAGTTGGAAGCAAGATCGTGGAAATGAAGGACATCATTGTGCTGGTGACCAGTCTTGGGAAATATATCTTCGCATCTATACTGGGCCACATTATTCATGGAGTAATTGTTCTGCCACTTATTTATTTTGTTTTCACACGAAAAAACCCATTCAGATTCCTCCTGGGCCTTCTCACGCCATTTGCAACAGCATTTGCCACCTGCTCCAGCTCAGCAACCCTTCCTTCCATGATAAAGTGCATTGAAGAAAACAATGGTGTAGACAAGAGGATCAGCAGGTTTATTCTTCCCATTGGGGCCACTGTGAACATGGACGGGGCAGCCATCTTCCAATGTGTGGCTGCGGTGTTCATTGCCCAACTCAACAACGTGGAGCTGAATGCAGGACAGATTTTCACGATTCTAGTGACCGCCACAGCATCCAGTGTTGGAGCAGCAGGCGTGCCAGCTGGAGGGGTCCTCACCATTGCCATTATCCTGGAAGCCATTGGCCTGCCCACCCAAGACCTCTCTCTAATCCTGGCTGTGGACTGGATTGTGGACCGGACCACCACTGTGGTGAACGTGGAAGGGGATGCCCTGGGCGCAGGCATTCTCCACCACCTGAATCAGAAGGCCATGAAGAGAGGAGAGCAGGAACTGAGTGAGGTGAAAGTGGAAGCCGTCCCCAACTGCAAGTCCGAGGAGGAGACGTCACCCCTGGTGACACACCAGAACCCCGTCGGGCCTGTGGCCAGTGCCCCAGAAGTGGAGTCCAAGGAGTCGGTGCTGTGA

Related Sequences

XP_004850022.1 Protein

Slc1a4 PREDICTED: neutral amino acid transporter A [Heterocephalus glaber]

Length: 530 aa      View alignments
>XP_004850022.1
MEKSSETNGYLDSAQAGPAGGPGAPGTAAGRARRCAGFLRRHALVLLTVSGVLAGAGLGAALRKLKLSPTQVIYLAFPGEMLLRMLRMIILPLVVCSLVSGAASLDASSLGRLGGIAVAYFGLTTLGASALAVALAFIIKPGSDAQSLQSSGLDLKESGPPPIPKETVDSFLDLVRNLFPSNLVVASFRTYATNYNVVNHTSFGNVSEKIPIGTEIEGMNILGLVLFALVLGVALKKLGSEGEELIRFFSSFNEATMVLVSWIMWYVPVGIMFLVGSKIVEMKDIIVLVTSLGKYIFASILGHIIHGVIVLPLIYFVFTRKNPFRFLLGLLTPFATAFATCSSSATLPSMIKCIEENNGVDKRISRFILPIGATVNMDGAAIFQCVAAVFIAQLNNVELNAGQIFTILVTATASSVGAAGVPAGGVLTIAIILEAIGLPTQDLSLILAVDWIVDRTTTVVNVEGDALGAGILHHLNQKAMKRGEQELSEVKVEAVPNCKSEEETSPLVTHQNPVGPVASAPEVESKESVL