Details from NCBI annotation

Gene Symbol Aplf
Gene Name aprataxin and PNKP like factor
Entrez Gene ID 101704813

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APLF ENSCPOG00000003527 (Guinea pig)

Gene Details

aprataxin and PNKP like factor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003188, Guinea pig)

Protein Percentage 79.72%
CDS Percentage 87.01%
Ka/Ks Ratio 0.44136 (Ka = 0.1148, Ks = 0.26)

APLF ENSG00000169621 (Human)

Gene Details

aprataxin and PNKP like factor

External Links

Gene Match (Ensembl Protein ID: ENSP00000307004, Human)

Protein Percentage 73.23%
CDS Percentage 83.99%
Ka/Ks Ratio 0.58397 (Ka = 0.1625, Ks = 0.2783)

Aplf ENSMUSG00000030051 (Mouse)

Gene Details

aprataxin and PNKP like factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032130, Mouse)

Protein Percentage 58.99%
CDS Percentage 72.59%
Ka/Ks Ratio 0.43058 (Ka = 0.2886, Ks = 0.6703)

Aplf ENSRNOG00000043059 (Rat)

Gene Details

aprataxin and PNKP like factor (Aplf), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043929, Rat)

Protein Percentage 57.97%
CDS Percentage 72.71%
Ka/Ks Ratio 0.46559 (Ka = 0.293, Ks = 0.6294)

Genome Location

Sequence Coding sequence

Length: 1530 bp    Location: 4847593..4728443   Strand: -
>XM_004849939.1
ATGTCTGGGGGCTTCGAGCTGCAGCCGCAGGACGGCGGCCCCCGGGTGGCCCTGGCGTCCGGGGAGACGGTGATTGGCCGCGGGCCGTTGCTAGGAATAACAGACAAGAGAATATCCAGAAGACATGCTATTCTTGAGGTGGTGGGTGGTCAACTTCGAATCAAACCGATACACACAAATCCATGTTTTTATCGGTCTTCTGAGAACAGCCAGCTCTTACCAATGAAGATAAATCTTTGGCACTGGTTGAATCCTGGAGATAGTTTTTCTTTGTTAGCTGACAAATACATTTTTTGTGTTGTGTCAACACACTCTGAAATGGAAATAGAATGTACCTTAAGAAACAGTCAAATGCTTGATGAAGATGACATATTGAATGAAGTGCCCAAATCTCCTGTGATTAACTTACCTGATAAGACAGCTCGTACCTCACATCTGGAAAGAACTACAGAAATAACTGAGACTCAGACTACTAGCACAAGTAGTGTGCCCTTCCTAGGTGAATGCGGAGGCTTGAGTAAACAGCAGTCAGATCCTGGCCAGAGGAAAAGAAGCCTTCCAGCTTGGATGTTAGAAGATTTAAGTGATCAAAACCTTTTAGCACCTGTCATTAGTGGAGGTGGCATAATCCAGGGAAGTGGAAGAGAAGGAATCTGCAAAGAAAAAACCCACATAAATGTAACACAGCAAGGAAGAAAGCGAATTTCATCAGGAAATTCAGAAAGTGTATCAGGAGGACAAGATGCAGGGAAAAAGTGCAAAGATACTAATCAAGAAGAGTCTGTCATTTCATCCAAGGAAATGCCAGAATCATTTTCTGCAACCACATTAAGTAATCCAGATATGCATACTACGAAGATTAAAACACAGAGAAATGAAATTCCAATTGTGGGACTTGCTAAGGTTTCTAAACATAAAATCATGACTAAAGGAACACTAACTAAAGGAGACGAGGCATTGAGCTGTTCTGAGAGTTGTTCGAGTATCCAAGGCAAGTCATTCCTCAGTGAGTCTCAGAGATCTCATCCCAAGTCCAATTCAGAAGCTTCCAGTTCTGACACTTTGCATGCAAAGGAAACTGATTCACTTCCACGAAGTTCACAAGAGAACAAAGTTAAGAGGTCATCCTGCATGTATGGAGCAAACTGCTACAGGAAGAATCCTGTCCATTTTCAACACTTTAGCCACCCTGGTGATAGTGATTATGGAGGTATGCACGTCACAGGTCAAGATGAGACTGATGACCGGCCTGAATGTCCCTACGGGGCATCTTGTTATAGGAAGAATCTCCAACACAAGATAGAATATAGACATAGTATACTTCAGGTGAGAAGTGTTTCAGATGAAGATGATGCTGTTGGACAGCCCAATGAGTATGACCTGAATGACAGCTTTCTAGATGATGAGGAAGAAGAGTATGAGCTGACAGATGAAGATTCTGACTGGGAACCAGGAAAGGAAGACCAAGAACAGGAAGATGTAGAAGAACTTTTGAAAGAAGCAAAAAAGTTTATGAAAAGAAAAAAGTAA

Related Sequences

XP_004849996.1 Protein

Aplf PREDICTED: aprataxin and PNK-like factor [Heterocephalus glaber]

Length: 509 aa      View alignments
>XP_004849996.1
MSGGFELQPQDGGPRVALASGETVIGRGPLLGITDKRISRRHAILEVVGGQLRIKPIHTNPCFYRSSENSQLLPMKINLWHWLNPGDSFSLLADKYIFCVVSTHSEMEIECTLRNSQMLDEDDILNEVPKSPVINLPDKTARTSHLERTTEITETQTTSTSSVPFLGECGGLSKQQSDPGQRKRSLPAWMLEDLSDQNLLAPVISGGGIIQGSGREGICKEKTHINVTQQGRKRISSGNSESVSGGQDAGKKCKDTNQEESVISSKEMPESFSATTLSNPDMHTTKIKTQRNEIPIVGLAKVSKHKIMTKGTLTKGDEALSCSESCSSIQGKSFLSESQRSHPKSNSEASSSDTLHAKETDSLPRSSQENKVKRSSCMYGANCYRKNPVHFQHFSHPGDSDYGGMHVTGQDETDDRPECPYGASCYRKNLQHKIEYRHSILQVRSVSDEDDAVGQPNEYDLNDSFLDDEEEEYELTDEDSDWEPGKEDQEQEDVEELLKEAKKFMKRKK