Details from NCBI annotation

Gene Symbol Pcbp1
Gene Name poly(rC) binding protein 1, transcript variant X1
Entrez Gene ID 101726771

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCBP1 ENSCPOG00000013511 (Guinea pig)

Gene Details

poly(rC) binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012166, Guinea pig)

Protein Percentage 99.72%
CDS Percentage 97.46%
Ka/Ks Ratio 0.01075 (Ka = 0.0012, Ks = 0.1155)

PCBP1 ENSG00000169564 (Human)

Gene Details

poly(rC) binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000305556, Human)

Protein Percentage 99.72%
CDS Percentage 97.0%
Ka/Ks Ratio 0.00908 (Ka = 0.0012, Ks = 0.137)

Pcbp1 ENSMUSG00000051695 (Mouse)

Gene Details

poly(rC) binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054863, Mouse)

Protein Percentage 99.72%
CDS Percentage 94.27%
Ka/Ks Ratio 0.00383 (Ka = 0.0012, Ks = 0.3175)

Genome Location

Sequence Coding sequence

Length: 1068 bp    Location: 3332576..3330978   Strand: -
>XM_004849916.1
ATGGATGCCGGTGTGACTGAAGGACTAAATGTGACTCTCACCATTCGGCTTCTTATGCACGGAAAGGAAGTAGGAAGCATCATTGGGAAGAAAGGGGAGTCGGTTAAGAGAATCCGCGAGGAGAGTGGCGCGCGGATCAATATCTCGGAGGGAAACTGCCCGGAGAGAATCATCACTCTGACCGGGCCCACCAATGCCATCTTTAAGGCTTTCGCTATGATTATCGACAAGCTGGAGGAAGATATCAACAGCTCCATGACCAACAGCACGGCGGCCAGCAGGCCCCCGGTGACCCTGCGGCTGGTGGTGCCGGCCACCCAGTGCGGCTCCCTGATTGGGAAAGGCGGCTGTAAGATCAAAGAGATCCGCGAGAGTACGGGGGCCCAGGTCCAGGTGGCGGGGGATATGCTGCCCAACTCGACCGAGCGGGCCATCACCATCGCTGGCGTGCCGCAGTCTGTCACCGAGTGTGTCAAGCAGATCTGCCTGGTCATGCTGGAGACGCTCTCCCAGTCTCCGCAAGGGAGAGTCATGACCATTCCGTACCAGCCCATGCCGGCCAGCTCTCCGGTCATCTGCGCGGGCGGCCAAGATCGCTGCAGCGACGCTGCGGGCTACCCCCACGCCACCCATGACCTGGAGGGACCACCTCTAGACGCCTACTCGATTCAAGGACAACACACCATTTCTCCGCTCGATCTGGCCAAGCTGAACCAGGTGGCAAGACAACAGTCTCACTTTGCCATGATGCACGGCGGGACCGGATTCGCCGGAATTGACTCCAGCTCTCCAGAGGTGAAAGGCTATTGGGCAAGTTTGGATGCATCTACTCAAACCACCCATGAACTTACCATTCCAAATAACTTAATTGGCTGCATAATCGGGCGCCAGGGCGCCAACATCAATGAGATCCGCCAGATGTCTGGGGCCCAGATCAAAATTGCCAACCCAGTTGAAGGCTCTTCTGGTAGGCAGGTTACTATTACTGGCTCGGCTGCCAGCATTAGTCTGGCCCAATATCTAATCAATGCCAGGCTTTCCTCTGAGAAGGGCATGGGGTGCAGCTAG

Related Sequences

XP_004849973.1 Protein

Pcbp1 PREDICTED: poly(rC)-binding protein 1 isoform X1 [Heterocephalus glaber]

Length: 355 aa     
>XP_004849973.1
MDAGVTEGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS