Details from NCBI annotation

Gene Symbol Tia1
Gene Name TIA1 cytotoxic granule-associated RNA binding protein, transcript variant X1
Entrez Gene ID 101725408

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TIA1 ENSCPOG00000008327 (Guinea pig)

Gene Details

TIA1 cytotoxic granule-associated RNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007485, Guinea pig)

Protein Percentage 99.48%
CDS Percentage 97.06%
Ka/Ks Ratio 0.01855 (Ka = 0.0023, Ks = 0.1266)

TIA1 ENSG00000116001 (Human)

Gene Details

TIA1 cytotoxic granule-associated RNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000401371, Human)

Protein Percentage 99.22%
CDS Percentage 95.77%
Ka/Ks Ratio 0.01748 (Ka = 0.0035, Ks = 0.1985)

Tia1 ENSMUSG00000071337 (Mouse)

Gene Details

cytotoxic granule-associated RNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093425, Mouse)

Protein Percentage 96.89%
CDS Percentage 92.06%
Ka/Ks Ratio 0.03652 (Ka = 0.0139, Ks = 0.3815)

Tia1 ENSRNOG00000016813 (Rat)

Gene Details

TIA1 cytotoxic granule-associated RNA binding protein (Tia1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023102, Rat)

Protein Percentage 96.53%
CDS Percentage 91.38%
Ka/Ks Ratio 0.039 (Ka = 0.0158, Ks = 0.4063)

Genome Location

Sequence Coding sequence

Length: 1161 bp    Location: 3185654..3220410   Strand: +
>XM_004849911.1
ATGGAGGACGAGATGCCCAAGACTCTATACGTCGGTAACCTTTCCAGAGATGTGACAGAAGCTCTAATTCTCCAGCTCTTTAGTCAAATTGGACCATGTAAAAACTGCAAAATGATTATGGATACAGCTGGAAATGATCCATACTGTTTTGTGGAGTTTCATGAACATCGCCATGCAGCTGCAGCACTAGCTGCTATGAATGGGCGGAAGATAATGGGTAAGGAAGTCAAAGTGAATTGGGCAACAACTCCCAGCAGTCAAAAGAAAGATACAAGCAGTAGTACCGTTGTCAGCACACAGCGTTCACAAGATCATTTCCATGTCTTTGTTGGTGATCTCAGTCCAGAAATTACAACTGAAGATATCAAAGCAGCTTTTGCACCATTTGGAAGAATATCAGATGCTCGAGTGGTAAAAGACATGGCAACAGGAAAGTCTAAGGGATATGGCTTTGTCTCCTTTTTCAACAAATGGGATGCCGAAAACGCCATTCAACAGATGGGTGGCCAGTGGCTTGGTGGAAGACAAATCAGAACTAACTGGGCAACCCGAAAGCCTCCAGCTCCCAAGAGTACATATGAGTCAAACACTAAACAGCTGTCATATGATGAGGTTGTGAGTCAGTCTAGTCCAAGCAACTGTACTGTGTACTGTGGAGGTGTCACTTCTGGGCTAACAGAACAGCTAATGCGTCAGACTTTTTCACCGTTTGGACAAATAATGGAAATTCGAGTCTTTCCAGATAAAGGATATTCATTTGTTCGGTTCAATTCCCATGAAAGTGCAGCACATGCAATTGTTTCTGTTAATGGTACTACAATTGAAGGTCATGTTGTGAAATGCTATTGGGGCAAAGAAACTCTTGATATGATAAATCCTGTGCAACAGCAGAATCAAATTGGATATCCACAACCTTATGGCCAGTGGGGCCAGTGGTATGGAAATGCACAACAGATTGGCCAATATATGCCTAATGGTTGGCAGGTACCTGCGTATGGAATGTATGGCCAAGCATGGAACCAGCAGGGATTTAATCAGACACAGTCTTCTACACCTTGGATGGGACCAAATTATGGAGTACAGCCGCCTCAGGGGCAGAATGGCAGCATGTTGCCTAATCAACCTGCGGGGTATCGAGTGGCAGGGTATGAAACCCAGTGA

Related Sequences

XP_004849968.1 Protein

Tia1 PREDICTED: nucleolysin TIA-1 isoform p40 isoform X1 [Heterocephalus glaber]

Length: 386 aa      View alignments
>XP_004849968.1
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSTPWMGPNYGVQPPQGQNGSMLPNQPAGYRVAGYETQ