Details from NCBI annotation

Gene Symbol Clec4f
Gene Name C-type lectin domain family 4, member F, transcript variant X2
Entrez Gene ID 101722072

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLEC4F ENSCPOG00000009327 (Guinea pig)

Gene Details

C-type lectin domain family 4, member F

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008370, Guinea pig)

Protein Percentage 72.98%
CDS Percentage 83.17%
Ka/Ks Ratio 0.57432 (Ka = 0.1706, Ks = 0.297)

CLEC4F ENSG00000152672 (Human)

Gene Details

C-type lectin domain family 4, member F

External Links

Gene Match (Ensembl Protein ID: ENSP00000272367, Human)

Protein Percentage 67.51%
CDS Percentage 78.22%
Ka/Ks Ratio 0.49862 (Ka = 0.2225, Ks = 0.4463)

Clec4f ENSMUSG00000014542 (Mouse)

Gene Details

C-type lectin domain family 4, member f

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000014686, Mouse)

Protein Percentage 57.0%
CDS Percentage 69.95%
Ka/Ks Ratio 0.45672 (Ka = 0.3412, Ks = 0.7471)

Clec4f ENSRNOG00000013137 (Rat)

Gene Details

C-type lectin domain family 4, member F (Clec4f), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017643, Rat)

Protein Percentage 55.53%
CDS Percentage 68.38%
Ka/Ks Ratio 0.39783 (Ka = 0.3562, Ks = 0.8955)

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location: 2567858..2584329   Strand: +
>XM_004849903.1
ATGGATGGTAACGCAGTCCACTTCTGCACAGACAACCAATGTGTCTCCTTGCACCCCCGAGCTCTACAGCCCCGAAACCCTACATCGGAGGAACATCCTTCCTTCCAAGACTTTCAAGTCATGTTTCCAGGAGACAACACTACTGAACAGTTACCTGTGGAACTGAATAGTCACTACTACTTTGGCAGGGTGCAAGACACTATCCAGATATTTAAGAGCCACATGGAAAATTCCAGCACCTGGCATGTGGAGATCCAGATGTTGAAGTGCAGAGTGGACAATGTCAGTTCTCAGGTCCAGGTGCTTGGGGCTCATCTGGGCGACACCAGGGCTGACATCCAGATGGTCAAAGGTGCTCTACAGGAGGCCAGTGCCTTGAGTCTGCAGACCCAGATGCTAGGAAATTCCTTGGAGGGGGCCAATGCTGAGATCCAGAAGCTGAAGGGAGATCTGGAAAAGGCAACTGCTTTAACCTTCCAGACCCAGGATTTCTTAAAAAGCAGCTCAGAAAACACCAGTGTTGAGCTCTACATGCTAAGCAGAGGCTTAGAAAGTGTGAACACTGAGATTCGAATGTTGAAGGCAGGTTTGGAAATGGCCAACACCCAGGCCAGCTTGGCAAATAGTAGTTTAAAGAATGCAAATGCTGAGATAAACACTCTGAGAGGTCACCTGGATAGTGTCAATGACTTGAGGACCCAGAATCAGATTTTAAGAAGTAGCCTGGAAGGAGCCCAGGCTGACATGCAAAGGCTAAGGGGAAGCCTGCAAAATGCAAATACTCTAAACTCCCAGACCCAGACCCTTCTCAAAGGCAGTTTAGACAACACTAGAGCTGAGATCCTCATACTGAGAGGTCATTTGGAAATGGCTGGTAATGAGATGCACCTGTTAAAAGGAGATTTGGAAACTGTCACTACCCAGACCCAACTAGCAAATGGCCATCTGGAGCAGACAGATGCTCAGATCCAAGTGTTAAAAGCAGAGCTGGAAAATGCCAATACCTTAAACTCCCAGATCCAGATATTAAATGGTCAGTTGAAAACTGCCAGCACAGAGATACAGACCTTAAAACAAGGAATGAAAGATACTGCAGCCTTAAATTCTCAGATGCAGATGTTAGGGAGTAATCTTCAGAAGGTCAGTGCCGAGATGCAGAAGTTAAAAGGGGATTTAGAGAACACCAAAACTCTAACAGCGAAAATCCAGGAGGAGCAGAGTAGCCTGGGGACCCTCCGTGCAATCATTGCTTCACTGGAGCAGCTACAAACAACCCAAAATCAACTTCTCCAGCTGCTCCTGCAAGGCTGGAAGGTGTATGGGGGAAACTTGTATTACTTTTCTCATGTCAAGAAGCCTTGGCATGAAGCTGAGCAGTTCTGTGTGTCCCAGGGAGCCCACCTGGCATCGGTCACCTCTCAGGAGGAGCAGGCATTCCTGGTACAGTTCACAAGTACCTCTTACTACTGGATCGGCCTCACTGACAGGGGTACTGAGGGCTCCTGGCGCTGGACAGATGGGACACCATTCAATAATGCCCAGAGCAAAAGGTTTTGGGACAAGAATCAACCAGACAACTGGCCACATGGGAGTGGGCAATCTGAAGACTGCGTCCATATTCAGAAGAAGTGGAACGACATAAACTGCAATAACTCCTATCAGTGGGTATGCAAGAAGAAAACAGGCCTGGCAATGGCCTGA

Related Sequences

XP_004849960.1 Protein

Clec4f PREDICTED: C-type lectin domain family 4 member F isoform X2 [Heterocephalus glaber]

Length: 566 aa      View alignments
>XP_004849960.1
MDGNAVHFCTDNQCVSLHPRALQPRNPTSEEHPSFQDFQVMFPGDNTTEQLPVELNSHYYFGRVQDTIQIFKSHMENSSTWHVEIQMLKCRVDNVSSQVQVLGAHLGDTRADIQMVKGALQEASALSLQTQMLGNSLEGANAEIQKLKGDLEKATALTFQTQDFLKSSSENTSVELYMLSRGLESVNTEIRMLKAGLEMANTQASLANSSLKNANAEINTLRGHLDSVNDLRTQNQILRSSLEGAQADMQRLRGSLQNANTLNSQTQTLLKGSLDNTRAEILILRGHLEMAGNEMHLLKGDLETVTTQTQLANGHLEQTDAQIQVLKAELENANTLNSQIQILNGQLKTASTEIQTLKQGMKDTAALNSQMQMLGSNLQKVSAEMQKLKGDLENTKTLTAKIQEEQSSLGTLRAIIASLEQLQTTQNQLLQLLLQGWKVYGGNLYYFSHVKKPWHEAEQFCVSQGAHLASVTSQEEQAFLVQFTSTSYYWIGLTDRGTEGSWRWTDGTPFNNAQSKRFWDKNQPDNWPHGSGQSEDCVHIQKKWNDINCNNSYQWVCKKKTGLAMA