Details from NCBI annotation

Gene Symbol Atp6v1b1
Gene Name ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
Entrez Gene ID 101720999

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP6V1B1 ENSCPOG00000010441 (Guinea pig)

Gene Details

ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009377, Guinea pig)

Protein Percentage 97.86%
CDS Percentage 95.0%
Ka/Ks Ratio 0.04144 (Ka = 0.0094, Ks = 0.2271)

ATP6V1B1 ENSG00000116039 (Human)

Gene Details

ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1

External Links

Gene Match (Ensembl Protein ID: ENSP00000234396, Human)

Protein Percentage 95.32%
CDS Percentage 90.19%
Ka/Ks Ratio 0.04299 (Ka = 0.0234, Ks = 0.5447)

Atp6v1b1 ENSMUSG00000006269 (Mouse)

Gene Details

ATPase, H+ transporting, lysosomal V1 subunit B1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000006431, Mouse)

Protein Percentage 94.93%
CDS Percentage 89.41%
Ka/Ks Ratio 0.04294 (Ka = 0.0243, Ks = 0.567)

Atp6v1b1 ENSRNOG00000013573 (Rat)

Gene Details

ATPase, H transporting, lysosomal V1 subunit B1 (Atp6v1b1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018302, Rat)

Protein Percentage 95.71%
CDS Percentage 89.6%
Ka/Ks Ratio 0.0374 (Ka = 0.021, Ks = 0.5607)

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location: 2480411..2447443   Strand: -
>XM_004849899.1
ATGGCTATGAAGGTAGACAGCAAGCCCGGGGGGCTCCCCAGCAGTGGCTCTGACCCAGGCACAGCCCGAGAGCACATGCAGGCAGTCACCCGAAACTACATCACCCACCCCCGAATCACCTACAGGACAGTGTGCAGTGTCAATGGGCCCCTGGTGGTGCTGGACCAGGTCAAGTTTGCCCAGTATGCTGAGATCGTCAACTTCACCCTGCCTGATGGAACTCAAAGGAGTGGCCAAGTGCTTGAAGTGGCTGGGACCAAGGCTATTGTTCAGGTGTTTGAAGGAACCTCTGGGATTGATTCCCAGAAGACCACCTGCGAGTTCACAGGCGACATTCTACGGACTCCAGTGTCAGAGGACATGTTGGGTCGGATTTTCAATGGCTCCGGAAAACCCATTGACAAAGGGCCTGTGGTCATGGCGGAGGATTTTCTGGACATCAATGGCCAACCCATCAACCCCCATGACCGAATCTACCCAGAGGAGATGATTCAGACTGGCATTTCTCCCATCGATGTCATGAACAGTATTGCCCGTGGTCAAAAGATCCCCATCTTCTCAGCGGCTGGGCTCCCCCACAATGAGATTGCAGCCCAGATCTGCCGTCAGGCTGGGCTGGTGAAGAAATCCAAAGCTGTGCTGGATTATCATGATGACAACTTCGCCATTGTCTTTGCAGCCATGGGGGTGAACATGGAGACAGCCAGGTTCTTCAAGTCCGACTTCGAGCAGAATGGAACTATGGGGAATGTCTGCCTCTTCCTGAACTTGGCCAACGACCCTACGATTGAGCGGATAATCACCCCGCGCCTGGCACTGACCACTGCAGAGTTCCTTGCCTACCAATGTGAGAAGCATGTGCTGGTCATACTGACAGACATGAGCTCCTATGCAGAGGCCTTGCGGGAGGTCTCAGCTGCCAGAGAGGAAGTGCCTGGGCGCCGAGGCTTCCCGGGATACATGTATACAGACCTGGCCACCATCTACGAGCGGGCAGGCCGCGTGGAGGGCCGGGGAGGATCCATCACACAGATCCCCATCCTCACCATGCCCAATGATGATATCACCCACCCCATCCCAGACTTGACGGGCTTCATCACTGAGGGACAGATCTACGTGGACAGACAGCTATATAACAGACAGGTTTACCCCCCTATCAATGTGCTCCCTTCCCTGTCCCGACTGATGAAGTCCGCCATTGGGGAGGGCATGACCAGAAAGGACCACGGAGATGTCTCCAACCAGCTGTACGCCTGCTACGCCATCGGGAAGGACGTGCAGGCCATGAAGGCCGTGGTGGGGGAGGAGGCGCTCACCTCGGAGGACCTGCTTTACCTGGAATTCCTGCAAAAGTTCGAGAAGAACTTCATTAACCAGGGCCCCTACGAGAACCGCTCGGTGTTCGAGTCTCTGGACCTGGGCTGGAAGCTGCTGCGAATCTTCCCCAAGGAGATGCTGAAGCGCATCCCTCAGAGCGTACTCGATGAGTTCTACTCCCGCGAGGGGGCGCCGCAGGACTCCGCGTCCTACACGGCGCTCTAG

Related Sequences

XP_004849956.1 Protein

Atp6v1b1 PREDICTED: V-type proton ATPase subunit B, kidney isoform [Heterocephalus glaber]

Length: 513 aa      View alignments
>XP_004849956.1
MAMKVDSKPGGLPSSGSDPGTAREHMQAVTRNYITHPRITYRTVCSVNGPLVVLDQVKFAQYAEIVNFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDSQKTTCEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPVVMAEDFLDINGQPINPHDRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLYNRQVYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQSVLDEFYSREGAPQDSASYTAL