Sequence details NCBI ID: XM_004849869.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Emx1
Gene Name empty spiracles homeobox 1, transcript variant X2
Entrez Gene ID 101710810

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EMX1 ENSCPOG00000025136 (Guinea pig)

Gene Details

empty spiracles homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016829, Guinea pig)

Protein Percentage 98.05%
CDS Percentage 95.46%
Ka/Ks Ratio 0.03354 (Ka = 0.0095, Ks = 0.2833)

EMX1 ENSG00000135638 (Human)

Gene Details

empty spiracles homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000258106, Human)

Protein Percentage 96.21%
CDS Percentage 93.79%
Ka/Ks Ratio 0.04425 (Ka = 0.0172, Ks = 0.3881)

Emx1 ENSMUSG00000033726 (Mouse)

Gene Details

empty spiracles homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046026, Mouse)

Protein Percentage 96.11%
CDS Percentage 90.27%
Ka/Ks Ratio 0.02394 (Ka = 0.0183, Ks = 0.7647)

Emx1 ENSRNOG00000015493 (Rat)

Gene Details

Protein Emx1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020786, Rat)

Protein Percentage 94.94%
CDS Percentage 89.75%
Ka/Ks Ratio 0.02964 (Ka = 0.0235, Ks = 0.7925)

Genome Location

Sequence Coding sequence

Length: 873 bp    Location: 701998..682957   Strand: -
Raw sequence   
>XM_004849869.1
ATGTGCCTGGCTGGGTGCACACCCCGCAAGGCGGCAGCGCCGGGACGCGGAGTGCTCCTCAGAGCCCCGCTGTCTCGCACGGCTACGGCGGCCGAGACCATGTTCCAGCCTGCGGCCAAGCGGGGCTTTACCATCGAGTCCTTGGTGGCCAAGGACGGTGGCACCGGCGGGGGCACTGGCGGCGGGGCAGCGGGCTCCCATCCCCTGGCGGCGGCCGCCTCAGAAGAACCGCTCCGGCCCACAGCGCTCAACTATCCTCACCCCAGCGCGGCCGAGGCAGCCTTCGTGAGCGGCTTTCCGGCTGCAGCCGCCGCGGGCGCCGGTCGCTCGCTCTACGGAGGGCCAGAGCTGGTGTTCCCCGAGGCCATGAACCACCCCGCGCTGACTGTGCACCCGGCGCACCAGCTGGGCGCCTCCCCGCTGCAGCCCCCGCACTCCTTCTTCAGCGCCCAGCACCGGGACCCCCTCCACTTCTACCCCTGGGTCCTGCGGAACCGCTTCTTCGGCCATCGCTTCCAGGGTGACGACGTGCCCCAGGACGGGCTGCTTCTGCACGGACCCTTCGCGCGCAAGCCCAAGCGGATCCGCACAGCCTTCTCGCCCTCGCAGCTGCTGCGGCTGGAGCGCGCCTTCGAGAAGAACCACTACGTGGTGGGCGCCGAGCGGAAGCAGCTGGCCGGCAGCCTCAGCCTCTCCGAGACGCAGGTGAAGGTGTGGTTCCAGAACCGGAGGACGAAGTACAAACGGCAGAAGCTGGAGGAAGAAGGACCAGAGTCTGAGCAGAAGAAGAAGGGCTCCCATCACATCAACCGGTGGCGCATTGCCACGAAGCAGGCCAACGGGGAGGACATCGATGTCACCTCTAATGACTAG

Related Sequences

XP_004849926.1 Protein

Emx1 PREDICTED: homeobox protein EMX1 isoform X2 [Heterocephalus glaber]

Length: 290 aa      View alignments
>XP_004849926.1
MCLAGCTPRKAAAPGRGVLLRAPLSRTATAAETMFQPAAKRGFTIESLVAKDGGTGGGTGGGAAGSHPLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFSAQHRDPLHFYPWVLRNRFFGHRFQGDDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIATKQANGEDIDVTSND