Details from NCBI annotation

Gene Symbol Smyd5
Gene Name SMYD family member 5, transcript variant X1
Entrez Gene ID 101707584

Database interlinks

Part of NW_004624762.1 (Scaffold)

For more information consult the page for NW_004624762.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMYD5 ENSCPOG00000013050 (Guinea pig)

Gene Details

SMYD family member 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011750, Guinea pig)

Protein Percentage 96.63%
CDS Percentage 94.79%
Ka/Ks Ratio 0.09218 (Ka = 0.0158, Ks = 0.1719)

SMYD5 ENSG00000135632 (Human)

Gene Details

SMYD family member 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000374152, Human)

Protein Percentage 96.17%
CDS Percentage 92.66%
Ka/Ks Ratio 0.0643 (Ka = 0.0187, Ks = 0.2904)

Smyd5 ENSMUSG00000033706 (Mouse)

Gene Details

SET and MYND domain containing 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048537, Mouse)

Protein Percentage 88.7%
CDS Percentage 86.22%
Ka/Ks Ratio 0.11347 (Ka = 0.0613, Ks = 0.5403)

Smyd5 ENSRNOG00000015589 (Rat)

Gene Details

SMYD family member 5 (Smyd5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020909, Rat)

Protein Percentage 93.05%
CDS Percentage 88.73%
Ka/Ks Ratio 0.07137 (Ka = 0.0347, Ks = 0.486)

Genome Location

Sequence Coding sequence

Length: 1263 bp    Location: 429741..416229   Strand: -
>XM_004849861.1
ATGGCGGCCTTCATGTGCGAAGTTTTCTCCTTCTGCGTGGGCGTGGCGGGTTCGGGCCGGGTTGCCGTAGAAGTCCGATTCGTGAGCAGCGCAAAGGGAAAGGGACTGTTTGCCACACAACTGATCCGGAAGGGAGAGACCATCTTCGTAGAAAGGCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTTTATCGCTACCGAGCCTGTGACCACTGCCTCAGGGCTCTAGAGAAGGCAGAGGAGAATGCCCAGAGGCTGACTGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTATGCACTGTGCACAAGGAACTCCACCAGAACTGTCCCCACTGCCAGGTGATGTACTGCAGTGCAGAATGTCGGCTGGCAGCTGCGGAGCAATACCACCGAGTCCTGTGCCCAGGCCCCTCTCCAGATGACCCCCTGCATCCTCTCAATAAGCTGCAGGAGGCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGCTCATGGCCCGAATGGTGGCCACAGTGAAGCAGGCTAAGGATAAGGACCGTTGGATCAGGCTCTTCTCCCAGTTCTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCACAAACTCCTGGGAGACAAATTCAAGGGCCAACTAGAACTTCTGCGGAGACTCTTCACAGAGGCCCTGTATGAGGAAGCACTCAGCCAGTGGTTCACTCCAGATGGATTCAGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGGATTGGGACCAGCTCCCTGAGCCAGTGGGTCCATGCCTGTGATGCTCTAGAGCTGAAACCTCAGGACCGTGAGCAGCTGGATACCTTCATTGACCAGCTGTACAAGGACATCGAGGCAGCTACTGGTGAGTTCCTTAACTGTGAAGGATCTGGCCTCTTTGTGCTTCAGAGCTGCTGTAACCACAGCTGTGTTCCCAATGCAGAGACTGCCTTCCCAGAAAACAACTTCCTTTTGCATGTCACCGCCCTGGAGGATATTAACCCAGGAGAGGAAATCTGTATCAGCTACTTAGACTGCTGTCAGCGGGAGCGCAGCCGCCACAGCCGCCATAAGATCCTTAGGGAGAACTATCTGTTTGTCTGTTCCTGCCCGAAATGCCTGGCAGAGGCTGATGAACCAAATGTGACCTCAGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGCCAGAAGATGCAGAGCTAGGGGATGAGATGACTGATGTGTGA

Related Sequences

XP_004849918.1 Protein

Smyd5 PREDICTED: SET and MYND domain-containing protein 5 isoform X1 [Heterocephalus glaber]

Length: 420 aa      View alignments
>XP_004849918.1
MAAFMCEVFSFCVGVAGSGRVAVEVRFVSSAKGKGLFATQLIRKGETIFVERPLVAAQFLWNALYRYRACDHCLRALEKAEENAQRLTGKPGQVLPHPELCTVHKELHQNCPHCQVMYCSAECRLAAAEQYHRVLCPGPSPDDPLHPLNKLQEAWRSIHYPPETASIMLMARMVATVKQAKDKDRWIRLFSQFCNKTANEEEEIVHKLLGDKFKGQLELLRRLFTEALYEEALSQWFTPDGFRSLFALVGTNGQGIGTSSLSQWVHACDALELKPQDREQLDTFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAETAFPENNFLLHVTALEDINPGEEICISYLDCCQRERSRHSRHKILRENYLFVCSCPKCLAEADEPNVTSEEEEEEEEEEEEEEEPEDAELGDEMTDV