Sequence details NCBI ID: XM_004849821.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pds5a
Gene Name PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae), transcript variant X1
Entrez Gene ID 101706850

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDS5A ENSCPOG00000011558 (Guinea pig)

Gene Details

PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010398, Guinea pig)

Protein Percentage 95.51%
CDS Percentage 93.94%
Ka/Ks Ratio 0.14481 (Ka = 0.0276, Ks = 0.1908)

PDS5A ENSG00000121892 (Human)

Gene Details

PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000303427, Human)

Protein Percentage 95.96%
CDS Percentage 92.74%
Ka/Ks Ratio 0.09921 (Ka = 0.0259, Ks = 0.2613)

Pds5a ENSMUSG00000029202 (Mouse)

Gene Details

PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031104, Mouse)

Protein Percentage 95.04%
CDS Percentage 88.96%
Ka/Ks Ratio 0.06365 (Ka = 0.0309, Ks = 0.4852)

Pds5a ENSRNOG00000002541 (Rat)

Gene Details

PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) (Pds5a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003437, Rat)

Protein Percentage 94.97%
CDS Percentage 88.74%
Ka/Ks Ratio 0.06399 (Ka = 0.0317, Ks = 0.4954)

Genome Location

Sequence Coding sequence

Length: 4026 bp    Location: 27029595..27175960   Strand: +
Raw sequence   
>XM_004849821.1
ATGGACTTCACCGCGCAGCCCAAGCCTGCCACTGCCCTCTGTGGCGTCGTGAGTGCCGATGGGAAGATTGCTTATCCTCCCGGAGTAAAGGAGATCACCGACAAGATCACCACGGACGAAATGATCAAACGACTGAAGATGGTAGTGAAAACTTTCATGGATATGGATCAGGACTCAGAAGATGAAAAACAGCAGTATCTCCCACTAGCCTTGCATCTTGCATCTGAATTCTTCCTCAGGAACCCTAATAAAGATGTGCGTCTCCTTGTAGCATGTTGTTTAGCTGATATATTTCGAATCTATGCCCCAGAAGCTCCATATACTTCCCATGATAAACTTAAGGACATATTTTTGTTTATTACCAGACAATTAAAAGGTTTGGAAGACACAAAGAGTCCACAGTTCAATAGATACTTTTATTTATTAGAGAATTTAGCTTGGGTTAAATCATATAACATCTGCTTTGAATTGGAAGATTGCAATGAAATTTTTATTCAGCTTTTTAGGACTCTCTTCTCAGTGATCAACAATAGCCACAATAAGAAGGTACAACTGCACATGCTAGACTTGATGAGTTCTATCATCATGGAAGGTGATGGAGTTACTCAAGAATTATTGGACTCCATACTTATCAACCTCATACCTGCACATAAGAACTTAAATAAACAGTCCTTCGACCTTGCAAAAGTCCTCTTAAAGAGGACAGTTCAGACTATTGAGGCGTGCATTGCCAATTTTTTCAATCAAGTCCTGGTGCTGGGAAGATCATCAGTAAGTGATTTGTCAGAACATGTATTTGATCTGATTCAGGAACTTTTTGCCATAGATCCTCATTTGTTATTATCTGTCATGCCGCAGCTTGAATTCAAACTGAAGAGCAATGATGGAGAAGAACGATTAGCTGTTGTTCGACTTCTAGCTAAATTGTTCGGCTCTAAAGATTCTGATTTGGCAACACAGAATCGACCTCTTTGGCAGTGTTTTCTTGGACGATTCAATGACATTCATGTTCCCGTGAGATTAGAAAGTGTGAAATTTGCCAGTCACTGTTTAATGAATCACCCAGATTTAGCAAAGGATCTCACAGAATATTTGAAAGTTAGATCACATGACCCAGAAGAAGCTATTCGGCACGATGTCATTGTTACTATAATAACAGCTGCCAAAAGAGACCTTGCCTTAGTAAATGATCAGCTGCTTGGCTTTGTAAGGGAAAGAACACTGGATAAACGGTGGCGAGTAAGAAAAGAAGCTATGATGGGCTTGGCTCAGCTTTATAAGAAATACTGTCTTCATGGTGAAGCAGGAAAGGAAGCTGCAGAGAAAGTCAGCTGGATAAAGGATAAACTTTTGCATATTTATTATCAGAATAGCATCGATGACAAACTGTTGGTAGAGAAAATCTTTGCTCAGTATCTTGTGCCCCACAACCTGGAAACAGAAGAGAGAATGAAATGTTTGTATTACTTGTATGCTAGTTTGGATCCAAATGCTGTAAAAGCTCTCAATGAAATGTGGAAGTGTCAGAACATGCTTCGGAGTCATGTACGTGAGCTATTGGATTTGCACAAGCAGCCTACATCAGAGGCTAACTGTTCTGCCATGTTTGGAAAACTGATGACCATAGCAAAGAATTTGCCTGATCCTGGCAAAGCACAAGATTTTGTGAAGAAATTTAACCAGGTTCTTGGTGATGATGAGAAACTACGGTCTCAGTTGGAGTTATTAATCAGCCCTACTTGTTCATGCAAACAGGCAGACATTTGTGTGAGAGAAATAGCTCGGAAACTTGCTAATCCTAAGCAACCAACAAATCCTTTTCTAGAGATGGTCAAATTTCTGTTGGAAAGAATTGCACCTGTGCACATTGATTCAGAAGCCATAAGTGCACTAGTAAAATTGATGAATAAATCAATAGAGGGGACAGCAGATGATGAAGAGGAGGGTGTAAGTCCAGATACAGCTATTCGTTCAGGACTTGAACTTCTTAAGGTATTTTTGAAACAGTTTTATTGCCATTTATTTTCATGGTATCATAATTTACATTCCCTTCAGGATATGCAAAATTGTCTTAAATATTTCTTTGAAAAGACTGCAATCCCAGCACTCCAGAGCCTTGAAGTTGCCACAGGTTCAAGAAAAAAAACTGATATTATTTTTTGCAGGACCTTAATTCCCATTTTACATCAAAAGGCAAAGAGGGGTACTCCACACCAAGCGAAACAGGCCGTGCACTGTATACATGCCATATTCACCAATAAAGAAGTCCAGCTTGCACAGATTTTTGAGCCACTCAGTAGGAGTCTGAATGCTGATGTACCAGAACAACTTATAACTCCGTTAGTTTCATTGGGCCACATTTCTATGTTAGCACCAGATCAGTTTGCTTCCCCAATGAAATCCGTAGTAGCAAATTTTATTGTGAAAGATCTACTAATGAATGACAGGTCAACAGGTGAAAAGAATGGAAAATTGTGGTCTCCAGATGAAGAAGTTTCTCCTGAAGTACTAGCAAAGGTACAGGCAATTAAACTTCTGGTAAGGTGGCTGTTGGGTATGAAAAACAACCAGTCTAAATCTGCCAATTCAACTCTTCGCTTATTATCGGCCATGTTGGTTAGTGAGGGTGACCTGACAGAGCAAAAGAGGATCAGTAAATCTGATATGTCTCGCTTGCGATTAGCTGCTGGTAGTGCCATAATGAAGCTTGCTCAGGAACCTTGTTACCATGAAATTATTACTCCAGAACAATTTCAACTCTGTGCATTAGTTATTAATGATGAGTGTTACCAAGTAAGGCAGATATTTGCTCAAAAGCTGCATAAGGCACTTGTGAAGCTACTGCTCCCGTTGGAGTATATGGCGATCTTTGCTTTGTGTGCCAAAGATCCTGTGAAAGAGAGAAGAGCACATGCACGGCAGTGTTTATTAAAAAACATCAGTATAAGAAGGGAGTACATTAAGCAGAACCCTATGGCTACTGAGAAATTGTTATCGCTGTTGCCTGAATATGTAGTTCCATACATGATTCATCTGTTAGCCCATGATCCAGATTTTACAAGATCACAAGATGTTGATCAGCTTCGTGATATCAAAGAGTGCCTGTGGTTTATGCTTGAAGTTTTAATGACAAAGAATGAAAACAATAGCCATGCCTTTATGAAGAAGATGGCAGAAAACATTAAATTAACCAGAGATGCCCAGTCTCCAGATGAATCCAAGACAAATGAAAAACTGTATACGGTATGTGATGTGGCGCTGTGTGTCATAAACAGCAAGAGTGCTCTGTGCAATGCAGATTCACCTAAGGATCCCGTCCTCCCGATGAAGTTTTTCACACAGCCTGAAAAGGACTTTTGTAATGACAAGAGTTATATTTCAGAAGAGACAAGAGTACTTCTGTTAACAGGAAAGCCAAAGCCTACTGGAGTACTAGGTGCAGTAAACAAGCCTTTATCAGCAACAGGAAGGAAACCCTATGTTAGAAGCACCGGCACTGAGACTGGAAGCAATATCAATGTAAATTCAGAACTGAACTCCTCAACCGGAAATCGAGCAAGGGAACAGAGTTCAGAGGCAGCAGAGACTGGAGTTAGTGAAAATGAGGAGAACCCTGTGAGAATTATTTCTGTCACACCTGTAAAGAATATTGAGGCGGTAAAGAATAAGGAAATTAATTCTGATCAGGCTACCCAGGGCAACATCAGCAGTGACCGAGGAAAGAAAAGAACAGTTCCAGCAGCTGGTGCAGAGAATATCCAACAAAAGACAGATGAGAAAATAGATGAATCAGGACCCCCTGCCCCTTCCAAACCCAGGAGAGGACGTCGACCCAAGTCTGAGTCTCAGGGCAACGCAACCAAAAATGATGATATAAACAAACCCACTAGCAAAGGAAGGAAAAGAGCTGCAGCAAGCCAGGAGACCCCAGGGGGTTTGGAAGCGGGTAACGCCAAAGCACCCAAACTGCAAGATGGAGCCAAAAAGGCCACGCCAGCAGAGAGACAGATCGACCTGCAAAGGTAA

Related Sequences

XP_004849878.1 Protein

Pds5a PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Heterocephalus glaber]

Length: 1341 aa      View alignments
>XP_004849878.1
MDFTAQPKPATALCGVVSADGKIAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQLHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGLELLKVFLKQFYCHLFSWYHNLHSLQDMQNCLKYFFEKTAIPALQSLEVATGSRKKTDIIFCRTLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCDVALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFCNDKSYISEETRVLLLTGKPKPTGVLGAVNKPLSATGRKPYVRSTGTETGSNINVNSELNSSTGNRAREQSSEAAETGVSENEENPVRIISVTPVKNIEAVKNKEINSDQATQGNISSDRGKKRTVPAAGAENIQQKTDEKIDESGPPAPSKPRRGRRPKSESQGNATKNDDINKPTSKGRKRAAASQETPGGLEAGNAKAPKLQDGAKKATPAERQIDLQR