| Gene Symbol | Limch1 |
|---|---|
| Gene Name | LIM and calponin homology domains 1, transcript variant X8 |
| Entrez Gene ID | 101699932 |
For more information consult the page for NW_004624761.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
| Protein Percentage | 91.13% |
|---|---|
| CDS Percentage | 91.79% |
| Ka/Ks Ratio | 0.23047 (Ka = 0.0486, Ks = 0.2108) |
LIM and calponin homology domains 1
| Protein Percentage | 89.58% |
|---|---|
| CDS Percentage | 90.21% |
| Ka/Ks Ratio | 0.19623 (Ka = 0.0541, Ks = 0.2759) |
LIM and calponin homology domains 1
| Protein Percentage | 85.89% |
|---|---|
| CDS Percentage | 85.29% |
| Ka/Ks Ratio | 0.16136 (Ka = 0.0799, Ks = 0.4952) |
LIM and calponin homology domains 1 (Limch1), mRNA
| Protein Percentage | 86.77% |
|---|---|
| CDS Percentage | 85.03% |
| Ka/Ks Ratio | 0.14298 (Ka = 0.0759, Ks = 0.531) |
>XM_004849807.1 ATGGCTTGTCCCGCGCTCGGTCTGGAAGCTCTGCAGCCCCTGCAGCCCGACCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATCGAGCAAGTAACTGGCAGAAGTTTTGGTGATAAAGATTTTCGGACTGGATTAGAAAATGGAATCCTTCTCTGCGAGTTGCTGAATGCAATAAAGCCAGGACTTGTTAAAAAGATCAATAGATTGCCTACCCCCATTGCAGGATTGGATAATATTATCTTATTCTTGAGAGGTTGTAAAGAACTCGGCCTGAAAGAATCTCAACTCTTTGACCCGAGTGACCTCCAGGACACGTCCAACAGAGTAACAATCAAGAATCCTGATTTTACTAGGAAGCTGAAAAATGTATTAGTTACCATTTACTGGCTGGGGAAAGCTGCAAACAGCTGTACTTCCTACAATGGAACTACACTGAACCTGAAGGAGTTTGAAGGATTGTTGGCTCAGATGAGAAAGGAGACTGATGACATTGAGAGTCCTAAACGCAGCATCCGAGACAGTGGTTACATTGATTGCTGGGATTCTGAGCGCAGTGACTCCCTTTCCCCTCCTCGCCACGGCAGGGATGATTCCTTCGACAGCCTGGACTCCTTTGGCTCCCGCTCCCGCCAGACACCTTCACCAGATGTAGTGCTCAGGGGAAGCAGCGATGGGAGAGGAAGTGATTCTGAATCTGACTTGCCACATCGGAAGCTTCCAGATGTGAAGAAAGATGACATGTCTGCACGGCGGACTTCCCATGGTGAGCCAAAATCAGCAGTGCCTTTTAACCAGTACCTCCCGAACAAAAGCAACCAGACAGCCTACGTCCCTGCTCCTCTGAGAAAGAAGAAAGCAGAGCGAGAGGAATATCGGAAGAGCTGGAGTACTGCTACCTCCCCCCTGGGCGGGGAGCGGCCCTTCAGATACGGTTCAAGAACTCCTGTGTCAGATGACGCAGAGAGCACGAGTATGTTTGACATGCGGTGCGAGGAGGAGGCCACGGTGCTGCCGCACAGCAGGGCCCGCCAGGAGCAGCTGCAGCTGATAAATAACCAGCTGAGGGAAGAGGACGACAAGTGGCAAGATGATCTGGCTCGATGGAAGAATCGGAGAAGAAGTGCTTCTCAGGACTTAATCAAGAAAGAGGAAGAAAGGAAAAAAATGGAGAAGTTATTGGCTGGAGAAGATGGGAAAAGTGAACGAAGAAAAAGTATCAAAACCTACAGAGAAATCGTTCAAGAAAAGGAACGGAGAGAGAGAGAGTTGCATGAGGCGTATAAGAATGCGAGGTCCCGGGAGGAGGCAGAGGGGATACTTCAGCAGTACATCGAAAGGTTCACCATCAGTGAGGCTGTCCTTGAACGCTTGGAGATGCCAAAAATTCTGGAAAGAAGCCATTCAACAGAGCCAAACTTATCCTCCTTCCTGAAAGACCCCAACCCCATGAAGTATCTGCGGCAACAGTCACTGCCTCCACCCAAATTCACTGCCACTGTTGAAACCACCATTGCTCGTGCCAGTGGTCTGGATACCAGCGTGTCAGCAGGCAGTGGGTCTCCAAGCAAAACTGTCACTCCCAAAGCAGTGCCTATGCTGACCCCCAAGCCTTACTCCCATCCCAAAAACTCTCAAGAGGTTCTGAAGACCTTTAAGGTAGATGGGAAAGTCAGCATGAATGGAGAGACAGTCCATGGAGATGAGGAGGAAAAAGAAAAAGAGAATTCTGCAGTGGTGCCTGGCCCCTCCTTAACCAAATCCCAGATGTTTGAAGGGGTGGCCAGAGTGCACGGGTCCCCAGTGGAGGTGAAACAGGACAAGAACAGCATTGAGATCAACATCAAGAAGCCAAATTCTCTTCCCCAGGAACTGACAGTAACCACTGAGGAAACTGAACAGAACACCCAAGATGATGAAAATGATGGTGAACAAGCAAGAAAAGGAAATGCAGAGCTTTCCTCATCAGAGTCACAGCATTTTACGACCACTGTGACTCGATGCAGCCCAACCGTGGCCTTTGTGGAATTCTCCTCCAGCCCCCAGCTAAAGAGCGATGTGCCAGAAGAAAAAGATGGGAAGAAACCAGAAAATGAGATGAGTGGAAAGGTGGAGTTGGTGCTGTCCCAAAAGGTGGTAAAGCCAAAATCCCCAGAACCAGAAGCAGCTCTGATGTTTCCATCTCTGGACAAAATGCCTGAAACCAACCAACTGCATTTGCCAAATCTTAATTCTCAAGTGGATTCTCCAAACAGTGAAAAGTCACCTCTAACTACACCTTTTAAGTTCTGGGCATGGGACCCAGAAGAAGAGCGGCGGCGACAGGAAAAATGGCAGCAGGAGCAGGAACGTTTGCTTCAGGAGCGATACCAGAAGGAGCAGGACAAGCTAAAAGAAGAGTGGGAAAAGGCCCAAAAGGAGGTGGAAGAAGAAGAACGCAGATACTATGAGGAGGAGCGTAAGATAATTGAAGACACTGTGGTGCCATTTACTGTTTCTTCAAGTTCTGCAGACCAGCTGTCTGTGTCTTCCTCTATCACTGAAGGCAGCAGGACCGTGAATAAGACAGATTTGGAAAACTGTCATGATGAAGAAAGAGAGAGAAAACAGAAGGAACCACTCCAGGGGAATGATAATGACATATTGCATCAAACCAAGGAAAGTGATCTGCTGGAGGAGAAGGGCAGCCCATCACAAGGGCCATGGACTCCTTCTGAGAATTCTGCATCCAAAGGAATCCATCAGGTCCATCAGCTGGATACAGAGGTTGGGGCCCCATTCGGTGGGACAAACCCACAGCTAGTTCAGGATCCATCCCAGAATCAGCAGGTACCAAACCCAACAACATACATGTCAGAAGATGTGAAGCCAGAAACCCTCCTGCTGCATAAAAACCTTAACCATCAGATTGAGTCTCCAAGTGAAAGGCAGAAGTCTATAAGTGGGAAGAAACTGTGCTCTTCCTGTGGGCTTCCATTGGGTAAAGGAGCTGCGATGATCATTGAGACCCTCGATCTCTATTTTCACATCCAGTGTTTTAGGTGTGGAATTTGTAAAGGACAGCTTGGAGATGCAGCGAGTGGCACTGATGTCAGGATTCGAAATGGTCTTCTTAACTGTAATGATTGCTACATACGATCCCGAAGTGCTGGCCAACCTACAACATTATGA
Limch1 PREDICTED: LIM and calponin homology domains-containing protein 1 isoform X8 [Heterocephalus glaber]
Length: 1058 aa View alignments>XP_004849864.1 MACPALGLEALQPLQPDPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNAIKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTIKNPDFTRKLKNVLVTIYWLGKAANSCTSYNGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHRKLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWSTATSPLGGERPFRYGSRTPVSDDAESTSMFDMRCEEEATVLPHSRARQEQLQLINNQLREEDDKWQDDLARWKNRRRSASQDLIKKEEERKKMEKLLAGEDGKSERRKSIKTYREIVQEKERRERELHEAYKNARSREEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSSFLKDPNPMKYLRQQSLPPPKFTATVETTIARASGLDTSVSAGSGSPSKTVTPKAVPMLTPKPYSHPKNSQEVLKTFKVDGKVSMNGETVHGDEEEKEKENSAVVPGPSLTKSQMFEGVARVHGSPVEVKQDKNSIEINIKKPNSLPQELTVTTEETEQNTQDDENDGEQARKGNAELSSSESQHFTTTVTRCSPTVAFVEFSSSPQLKSDVPEEKDGKKPENEMSGKVELVLSQKVVKPKSPEPEAALMFPSLDKMPETNQLHLPNLNSQVDSPNSEKSPLTTPFKFWAWDPEEERRRQEKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSADQLSVSSSITEGSRTVNKTDLENCHDEERERKQKEPLQGNDNDILHQTKESDLLEEKGSPSQGPWTPSENSASKGIHQVHQLDTEVGAPFGGTNPQLVQDPSQNQQVPNPTTYMSEDVKPETLLLHKNLNHQIESPSERQKSISGKKLCSSCGLPLGKGAAMIIETLDLYFHIQCFRCGICKGQLGDAASGTDVRIRNGLLNCNDCYIRSRSAGQPTTL