Sequence details NCBI ID: XM_004849799.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Phox2b
Gene Name paired-like homeobox 2b
Entrez Gene ID 101698856

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHOX2B ENSCPOG00000027349 (Guinea pig)

Gene Details

paired-like homeobox 2b

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014428, Guinea pig)

Protein Percentage 94.53%
CDS Percentage 93.43%
Ka/Ks Ratio 0.11137 (Ka = 0.0311, Ks = 0.2796)

PHOX2B ENSG00000109132 (Human)

Gene Details

paired-like homeobox 2b

External Links

Gene Match (Ensembl Protein ID: ENSP00000226382, Human)

Protein Percentage 98.91%
CDS Percentage 94.4%
Ka/Ks Ratio 0.01403 (Ka = 0.0046, Ks = 0.3301)

Phox2b ENSMUSG00000012520 (Mouse)

Gene Details

paired-like homeobox 2b

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000012664, Mouse)

Protein Percentage 98.91%
CDS Percentage 92.09%
Ka/Ks Ratio 0.00869 (Ka = 0.0046, Ks = 0.5329)

PHOX2B ENSRNOG00000002299 (Rat)

Gene Details

Protein Phox2b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003136, Rat)

Protein Percentage 98.91%
CDS Percentage 92.21%
Ka/Ks Ratio 0.0088 (Ka = 0.0046, Ks = 0.5255)

Genome Location

Sequence Coding sequence

Length: 825 bp    Location: 25234126..25237553   Strand: +
Raw sequence   
>XM_004849799.1
ATGTATAAAATGGAATATTCTTACCTCAATTCCTCTGCCTACGAGTCCTGTATGGCTGGGATGGACACCTCGAGCCTGGCTTCAGCCTATGCTGACTTCAGTTCCTGCAGCCAGGCCAGTGGCTTCCAGTATAACCCGATAAGGACCACTTTTGGGGCCACGTCCGGCTGCCCGTCCCTCACTCCGGGATCCTGCAGCCTCGGCACCCTCAGGGACCACCAGAGCAGTCCGTACGCCGCAGTTCCTTACAAACTCTTCACCGACCACGGCGGCCTCAACGAGAAACGCAAGCAGCGGCGCATCCGCACTACTTTCACGAGTGCGCAGCTCAAAGAGCTCGAGAGGGTCTTCGCTGAGACTCACTACCCTGACATCTACACCCGGGAGGAGCTGGCCCTGAAGATCGATCTCACTGAGGCGCGAGTCCAGGTGTGGTTCCAGAACCGCCGCGCCAAGTTTCGCAAGCAGGAGCGCGCAGCGGCGGCCGCGGCGGCGGCGGCCAAGAACGGCTCTTCTGGCAAGAAGTCCGACTCCTCCCGGGACGACGAGAGCAAGGAGGCCAAGAGCACCGACCCGGACAGCACCGGGGGCCCGGGCCCCACTCCCAACCCCACCCCCAGCTGCGGGCCGAGCGGCGGCGGAGGCGGAGGGCCGAGCCCCGCGGGCCTGGCGGCGGCCGGGGGCCCCGGACAAGGCTGGGCTCCTGGCCCCGGCCCCATCACCTCCATCCCGGATTCGCTCGGGGGCCCCTTCGCCAGCGTCCTATCTTCGCTCCAAAGACCCAACGGTGCCAAAGCCGCCTTAGTGAAGAGCAGTATGTTCTGA

Related Sequences

XP_004849856.1 Protein

Phox2b PREDICTED: paired mesoderm homeobox protein 2B [Heterocephalus glaber]

Length: 274 aa      View alignments
>XP_004849856.1
MYKMEYSYLNSSAYESCMAGMDTSSLASAYADFSSCSQASGFQYNPIRTTFGATSGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPTPNPTPSCGPSGGGGGGPSPAGLAAAGGPGQGWAPGPGPITSIPDSLGGPFASVLSSLQRPNGAKAALVKSSMF