Details from NCBI annotation

Gene Symbol Shisa3
Gene Name shisa homolog 3 (Xenopus laevis), transcript variant X1
Entrez Gene ID 101726768

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SHISA3 ENSCPOG00000013333 (Guinea pig)

Gene Details

shisa family member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012003, Guinea pig)

Protein Percentage 95.8%
CDS Percentage 93.84%
Ka/Ks Ratio 0.07682 (Ka = 0.0202, Ks = 0.2623)

SHISA3 ENSG00000178343 (Human)

Gene Details

shisa family member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000326445, Human)

Protein Percentage 94.96%
CDS Percentage 90.2%
Ka/Ks Ratio 0.04447 (Ka = 0.0241, Ks = 0.5413)

Shisa3 ENSMUSG00000050010 (Mouse)

Gene Details

shisa homolog 3 (Xenopus laevis)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084494, Mouse)

Protein Percentage 93.28%
CDS Percentage 87.54%
Ka/Ks Ratio 0.04424 (Ka = 0.0317, Ks = 0.7165)

Shisa3 ENSRNOG00000025670 (Rat)

Gene Details

shisa family member 3 (Shisa3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033959, Rat)

Protein Percentage 93.28%
CDS Percentage 87.82%
Ka/Ks Ratio 0.04853 (Ka = 0.0334, Ks = 0.6885)

Genome Location

Sequence Coding sequence

Length: 717 bp    Location: 24518637..24514251   Strand: -
>XM_004849792.1
ATGGGGAGGCTGCTGGCTCTCTGTCTCCTCCTGGGCTGGCTGCGCTGGGACCCAACGGTCGCCCAGCAGCCCGGGGAGTACTGCCACGGCTGGGTGGACGTGCAAGGCAACTACCATGAGGGTTTCCAGTGCCCAGAGGACTTCGATACGCTGGACGCCACCATCTGCTGCGGGTCCTGCGCGCTCCGCTACTGCTGCGCTGCGGCCGACGCCAGGCTGGAGCAGGGAGGCTGCACCAACGACCGTGGCGAGCTGGAGCACCCCGGCATCACCTCGCAGCCTGTCTACGTCCCCTTCCTGATCGTCGGCTCCATCTTCATTGCATTCATCATATTGGGCTCCTTAGTGGCCATTTATTGTTGCACCTGTTTGAGACCCAAGGAGCCCTCCCAGCAGCCAATCCGCTTCTCACTCCGCAGCTATCAGACGGAGACCTTGCCTATGATCTTGACCTCCACGAGCCTCAGGGCACCTTCCCGGCAGTCCAGCACAGCCACCAGCTCCAGCTCCACAGGTGGTTCCATCCGCAGGTTCTCTTTTGCCAGGGCCGAGCCAGGCTGTCTGGTACCCTCACCACCCCCACCTTACACCACGAGCCACCCAATCCACTTGACCCAACCATCAGGTTTCCTTGTGTCACCCCAGTATTTTGCTTATCCTCTCCAGCAGGAGCCCCCGCTACCTGGGAAGAGCTGTCCAGACTTCAGTTCCAGTTGA

Related Sequences

XP_004849849.1 Protein

Shisa3 PREDICTED: protein shisa-3 homolog isoform X1 [Heterocephalus glaber]

Length: 238 aa      View alignments
>XP_004849849.1
MGRLLALCLLLGWLRWDPTVAQQPGEYCHGWVDVQGNYHEGFQCPEDFDTLDATICCGSCALRYCCAAADARLEQGGCTNDRGELEHPGITSQPVYVPFLIVGSIFIAFIILGSLVAIYCCTCLRPKEPSQQPIRFSLRSYQTETLPMILTSTSLRAPSRQSSTATSSSSTGGSIRRFSFARAEPGCLVPSPPPPYTTSHPIHLTQPSGFLVSPQYFAYPLQQEPPLPGKSCPDFSSS