Details from NCBI annotation

Gene Symbol Spata18
Gene Name spermatogenesis associated 18, transcript variant X1
Entrez Gene ID 101704342

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPATA18 ENSCPOG00000011469 (Guinea pig)

Gene Details

spermatogenesis associated 18

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010311, Guinea pig)

Protein Percentage 78.11%
CDS Percentage 85.88%
Ka/Ks Ratio 0.48025 (Ka = 0.127, Ks = 0.2644)

SPATA18 ENSG00000163071 (Human)

Gene Details

spermatogenesis associated 18

External Links

Gene Match (Ensembl Protein ID: ENSP00000295213, Human)

Protein Percentage 80.44%
CDS Percentage 83.53%
Ka/Ks Ratio 0.28383 (Ka = 0.1223, Ks = 0.4309)

Spata18 ENSMUSG00000029155 (Mouse)

Gene Details

spermatogenesis associated 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064308, Mouse)

Protein Percentage 72.03%
CDS Percentage 75.45%
Ka/Ks Ratio 0.241 (Ka = 0.1945, Ks = 0.8072)

Spata18 ENSRNOG00000002120 (Rat)

Gene Details

spermatogenesis associated 18 (Spata18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002899, Rat)

Protein Percentage 68.76%
CDS Percentage 73.41%
Ka/Ks Ratio 0.26493 (Ka = 0.2242, Ks = 0.8464)

Genome Location

Sequence Coding sequence

Length: 1668 bp    Location: 17642326..17579102   Strand: -
>XM_004849726.1
ATGGCGGAAAACCTGAGGGAGCTGGCCTCGAATGAATCTTTACAACGGTTGCAGGAAAAGCTAGAGTCTTGGGTGAAGGAGTACGACACAAACTCATGTGATCAAAATCTAAATAATTGCCTTGAACTCATCAAGCAAGTTGCCAAAGTACAAGGACAACTCTTTGGGATCCTCACTACAACTGCTCAAGAAGGAGGACATAACGATGGTGTGGAAACAATCAAGTCACGCCTTTTGCCTTGGTTAGAAGCTTCTTTTACGGCTGCTTCCCTGGGAAGACCTATTGATAGCAAGGTCCCCTCTCTACAGGACACGTTTGATAGAGAGAGACATAAAGAGCAGGGTCTTCGGGATCAAGATCTACAACAATTAAACTCCGACTCGAACTCAACCCATAATCAGCTCAACCAGGTCAAAGACAAGTTTAAATCCCTTCAAGCCCAGGAGGTTGCCCACCACAGAAGCACTGCAACTAGGCGCCAAGAGCAGTGCAAAACTGAGCAGAGGGTTTTGGCCAGGCAGAACACAGACCAGCGGGACACAGAGCTGTATGAGGTGTATGAGAAACAGATCCGAGACCTGAAAGATGAGATAGCTGTCCTGTCTGCAGAAAAATCTAGTCTCCAAGGAAGGTCAGCCAGGAGCCAGTCTCCTAGCCCTGAGCATCAGAGCCACAGTGACAACTATAGCCAGAGCAGGTCTGCCAGCCCCTCTACCGCAGTTGCCAAGGACAGAAGCCCATCACCAAATCGGTCCAAACTGTCCAGTGTGGCTCGCAAGGCTGCCCTCCTGTCCAGGTTCAGTGATGCCTATTCGCAAGCCCGCCTGGATGCACAGTGCCTGCTTCGGCGCTGCATCGACAATGCTGAGACTGTGCAGCGCATCATCTACATTGCCACTGTGGAGGCATTTCATGTGGCTAAAATGGCATTCAGACACTTCAAGTTCCGGGTGAGGAAGTCAATGACGACACCATCTTACTTGGGGTCGAATGACTTTGAGAATGCTGTCATGGACTATATCATTTGTCATCTTGATCTATATGATTCCCAAAGCAGTGTTAATGATGTGATCCGTGCCATGAATATCAACCCCAAGATCTCGTTCCCTCCTGAAGTCGACTTTTGCCTCCTCAGTGACTTCATCCAGGAGATATGCTGTATTGCCTTTGCAATGCAGTCATTGGATCCTCCCCTTGATATCACCTTTGGGGCTGATGGAGAAATCTTCAATGATTGCAAGTACCGTCGCAGCTATGACTCAGATTTCACTGCTCCCTTGGTCTTTTATCATGTGTGGCCTGCACTCATGGAGAATGACTGTGTCATTATGAAGGGAGAAGCTGTCACCAAGAGAGGGGCTTTTTGGAATTCGGTGCGATCTCTGAGTCGATGTCGAAGCAGGAGTTTAAGTCCCATTTACCCCCGTAGCCGCATTGGTTTAAGCACGATATCTCGAAGTCGGAGTCCTTCTCCAATAAGATGTACATTGCCAAGTGAGTGGATAGTTAAGATGGATCAAGTTTCATGCTTCTTAATACTCTTTCTAATACTCTGCATTGTTCAGCAAGAAGAATGGTTTTCTGGGAAAAATCTTTTCTCTCCACCTCACAGCATTCATTTCTGGCCCACTTTGATGCTGGTGCCCACAGAGATTCCTGTAAGTTAA

Related Sequences

XP_004849783.1 Protein

Spata18 PREDICTED: mitochondria-eating protein isoform X1 [Heterocephalus glaber]

Length: 555 aa      View alignments
>XP_004849783.1
MAENLRELASNESLQRLQEKLESWVKEYDTNSCDQNLNNCLELIKQVAKVQGQLFGILTTTAQEGGHNDGVETIKSRLLPWLEASFTAASLGRPIDSKVPSLQDTFDRERHKEQGLRDQDLQQLNSDSNSTHNQLNQVKDKFKSLQAQEVAHHRSTATRRQEQCKTEQRVLARQNTDQRDTELYEVYEKQIRDLKDEIAVLSAEKSSLQGRSARSQSPSPEHQSHSDNYSQSRSASPSTAVAKDRSPSPNRSKLSSVARKAALLSRFSDAYSQARLDAQCLLRRCIDNAETVQRIIYIATVEAFHVAKMAFRHFKFRVRKSMTTPSYLGSNDFENAVMDYIICHLDLYDSQSSVNDVIRAMNINPKISFPPEVDFCLLSDFIQEICCIAFAMQSLDPPLDITFGADGEIFNDCKYRRSYDSDFTAPLVFYHVWPALMENDCVIMKGEAVTKRGAFWNSVRSLSRCRSRSLSPIYPRSRIGLSTISRSRSPSPIRCTLPSEWIVKMDQVSCFLILFLILCIVQQEEWFSGKNLFSPPHSIHFWPTLMLVPTEIPVS