Details from NCBI annotation

Gene Symbol Lnx1
Gene Name ligand of numb-protein X 1, E3 ubiquitin protein ligase, transcript variant X1
Entrez Gene ID 101699931

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LNX1 ENSCPOG00000010775 (Guinea pig)

Gene Details

ligand of numb-protein X 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009674, Guinea pig)

Protein Percentage 77.42%
CDS Percentage 86.38%
Ka/Ks Ratio 0.62251 (Ka = 0.1335, Ks = 0.2145)

LNX1 ENSG00000072201 (Human)

Gene Details

ligand of numb-protein X 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000263925, Human)

Protein Percentage 80.3%
CDS Percentage 84.57%
Ka/Ks Ratio 0.27926 (Ka = 0.1107, Ks = 0.3963)

Lnx1 ENSMUSG00000029228 (Mouse)

Gene Details

ligand of numb-protein X 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084405, Mouse)

Protein Percentage 80.72%
CDS Percentage 81.36%
Ka/Ks Ratio 0.17633 (Ka = 0.1131, Ks = 0.6412)

Lnx1 ENSRNOG00000002272 (Rat)

Gene Details

ligand of numb-protein X 1, E3 ubiquitin protein ligase (Lnx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003088, Rat)

Protein Percentage 80.44%
CDS Percentage 82.32%
Ka/Ks Ratio 0.19175 (Ka = 0.1107, Ks = 0.5773)

Genome Location

Sequence Coding sequence

Length: 2193 bp    Location: 15948253..16069825   Strand: +
>XM_004849713.1
ATGAGCCAGCCAGACCCTGCTGATGACCCAAAAGCCAGGCCTGATCCCCCATGTGTGGTGTGTGGCCAAGCCCACTCCCCTGAAGAAAACCACTACTACACCTATGTGGAAGATGTGGACGATGACCTCGTATGCCACATCTGCCTACAGGCCTTGCTGGATCCCCTGGACACTCCATGTGGGCACACCTACTGCACCGTCTGCCTCACCAATTTCCTGTTTCAGAAGGACTTCTGCCCCATGGACCGAAAGCCCATTATCCTGCAGCACTGCAAGAAGTCCAACATCCTGGTGAACAAGTTCCTCAACAAGCTGCTGGTGACCTGCCCTTTCACAGAGCACTGTACTGAAGTGGTGCAGCGCTGTGACCTCCAGCATCACTTCCAAACAAGCTGTAAAGGTGCCTCCCACTACGGCCTGACCAAGGACAGAAAGAGACGCTCCCAAGGTGGCTGCTCTGATGGCTGCGCAAGTCTCATGGCCTCCTCACTCTCCCCAGAGGTTTCGGCAGCTGCCACCATTTCCTTAACAACCCATGAGCCTGGGCTAGACAACCCTGCCTACATGTCCACAGTGGAGGATGGTCAGCCAGAAAACAGCCCCATGGACACTGGCAGGAGCAACCGAAACAGGGCATGGCCCTTTGAGCGATCCAGTTTCAGAAGCAGATCTTTAAAAAAATTTAATCGAGCCTTGAATGTTCTTCGAAGGACAAAGAGTGCGAGTATAGTTGCCAATCGTGCTGAGCAGAGCAGGGGAAACCATGAAAATGCCACTGAAGTCTTTCCAAGGTTGTATCACCTGATTCCACATGGGCAGATTACCAGCATCAAGATCAATCGAATGGATCCCAACGAAAGCCTCTCCATTAGGCTTGTGGGAGGCAGCGAAACCCCACTTGCCCACATCATTATCCAGCATGTTTATAGTGATGGAGTGATTGCCAGAGACGGCCGGCTGCTGCCTGGAGACATCATTCTCAAAGTCAATGGGATGGACATCAGCAACATCCCTCACAACTATGCCATAGGCCTCCTGCGACAGCCCTGCCAGGTGCTGTGGCTCACAGTGCTACGTGAACAGAAATTCCGAGGTGGGAGAAGCAGACAGACCTTGGACTCTTACGTACCTCGAAATGACAGTTTCCATGTGATACTCAACAAAAGTACCCCCGAGGAGCAGCTTGGAATAAAACTGGTCCGCAAGGTGGATGAGCCTGGTGTATTCATCTTCAATGTGCTGAATGGTGGTGTGGCAGACCGACATGGCCAGTTGCAAGAAAATGATCGCATATTGGCCATCAATGGACATGACCTGCGACATGGCAGCCCAGAAAGTGCAGCACATCTGATTCAGGCCAGTGAAAGGTATGTTCACCTCGTCGTGTCCCGCCGAGTTTCACAGCAGAGCCTAGACATCTTTCCAGAAATCAGCTGGACTCCCAGCAGCAACCAGTCTCCAGGTCCAGGGGACAAGAGCATTGCTGCCAAGCCCTTCCATCCTGCACCTGCCTGTCATGAGAAGGTGGTAAGTGTCCGAAAAGACCCCAACGAATCTCTTGGCATGACCGTTGCAGGGGGAGCCTCACATAGGGAATGGGACTTGCCTATCTATGTCATCAGCGTTGAACCTGGAGGAGTCATAAGCAGAGATGGAAGAATAAAAACAGGTGACATTTTGTTGAATGTGAATGGAGTTGAACTCACAGGGCTCAGCCGGAGTGAGGCAGTTGCTTTGTTGAAAAGCAAGTCCTCCTTGGTGGTACTGAAAGCCTTGGAAGCTAGAGAACACGAGCCCCAGGAAGACTGCAGCAGTGCAGCAGCCCTGCACTCCAAGGACAATATGACCCCTCCTAACAACTGGTCCCCAACCTGGGTCATGTGGCTAGAATTAAGAAGGTACTTTCGTAACTATAAAGATGTTGTATTACGAAGAAACACAGCTGGAAGTCTGGGCTTCTGCATTGTAGGAGGTTATGAAGAAAACAGTGGGCACAAACCTTTTTTTATCAAATCCATTGTTGAAGGAATGCCAGCATACAAGGATGGAAGAATTAGATGTGGTGATATTCTTCTTGCTGTCAATGGGAGAAGTACATCAGGCATGACGCCTGCTTGCTTGACAAAGATGCTGAAAGACCTTAAAGGAAGAATTACTCTCACTATAGTTTCTTGGCCTGGCACTTTTTTATAA

Related Sequences

XP_004849770.1 Protein

Lnx1 PREDICTED: E3 ubiquitin-protein ligase LNX isoform X1 [Heterocephalus glaber]

Length: 730 aa      View alignments
>XP_004849770.1
MSQPDPADDPKARPDPPCVVCGQAHSPEENHYYTYVEDVDDDLVCHICLQALLDPLDTPCGHTYCTVCLTNFLFQKDFCPMDRKPIILQHCKKSNILVNKFLNKLLVTCPFTEHCTEVVQRCDLQHHFQTSCKGASHYGLTKDRKRRSQGGCSDGCASLMASSLSPEVSAAATISLTTHEPGLDNPAYMSTVEDGQPENSPMDTGRSNRNRAWPFERSSFRSRSLKKFNRALNVLRRTKSASIVANRAEQSRGNHENATEVFPRLYHLIPHGQITSIKINRMDPNESLSIRLVGGSETPLAHIIIQHVYSDGVIARDGRLLPGDIILKVNGMDISNIPHNYAIGLLRQPCQVLWLTVLREQKFRGGRSRQTLDSYVPRNDSFHVILNKSTPEEQLGIKLVRKVDEPGVFIFNVLNGGVADRHGQLQENDRILAINGHDLRHGSPESAAHLIQASERYVHLVVSRRVSQQSLDIFPEISWTPSSNQSPGPGDKSIAAKPFHPAPACHEKVVSVRKDPNESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVNGVELTGLSRSEAVALLKSKSSLVVLKALEAREHEPQEDCSSAAALHSKDNMTPPNNWSPTWVMWLELRRYFRNYKDVVLRRNTAGSLGFCIVGGYEENSGHKPFFIKSIVEGMPAYKDGRIRCGDILLAVNGRSTSGMTPACLTKMLKDLKGRITLTIVSWPGTFL