Details from NCBI annotation

Gene Symbol Pdgfra
Gene Name platelet-derived growth factor receptor, alpha polypeptide, transcript variant X2
Entrez Gene ID 101697360

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDGFRA ENSCPOG00000011782 (Guinea pig)

Gene Details

platelet-derived growth factor receptor, alpha polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010597, Guinea pig)

Protein Percentage 94.4%
CDS Percentage 91.8%
Ka/Ks Ratio 0.09692 (Ka = 0.0284, Ks = 0.2927)

PDGFRA ENSG00000134853 (Human)

Gene Details

platelet-derived growth factor receptor, alpha polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSP00000257290, Human)

Protein Percentage 90.63%
CDS Percentage 88.58%
Ka/Ks Ratio 0.13174 (Ka = 0.0514, Ks = 0.39)

Pdgfra ENSMUSG00000029231 (Mouse)

Gene Details

platelet derived growth factor receptor, alpha polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127173, Mouse)

Protein Percentage 87.42%
CDS Percentage 84.51%
Ka/Ks Ratio 0.10794 (Ka = 0.0703, Ks = 0.6511)

Pdgfra ENSRNOG00000002244 (Rat)

Gene Details

platelet derived growth factor receptor, alpha polypeptide (Pdgfra), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003077, Rat)

Protein Percentage 87.22%
CDS Percentage 84.16%
Ka/Ks Ratio 0.10039 (Ka = 0.07, Ks = 0.6974)

Genome Location

Sequence Coding sequence

Length: 3270 bp    Location: 15269663..15225356   Strand: -
>XM_004849709.1
ATGGGGACATCCTGCCCGGCCTTCTTGGTCCTTGGCTGTCTCCTCACAGAGCTGAGCCTAATCCTCTGCCAGCTTCCACTGCCCTCCATCCTTCCAAATGAAGATGAAAAGGTCGTGCAGCTGAATTCATCCTTTTCTCTGCGGTGCTTCGGGGAGAGTGAAGTGAGCTGGAAGTACCCCATGACTCCAGGAGACGTCCCCGACGTGGAGATCAGAAATGAGGAAAACAACAGCGGCCTTTTTGTGGCGGTGCTGGAAGTGGCCAATGCCTTGGCGGCCCACACCGGCTGGTACACTTGCTACTACAACCACACACAGACGGAGGAGGGCGAGGTCCAGGGCAGGCACCTTTACGTCTATGTGCCGGACCCAGATGTGGCCTTTTTGCCTCTAGAAATGACAGATTACATAGTCCTCGCAGACACCGATGACTCTGCCATCATACCCTGTCGCACAACAGATCCCAAGACTCCCGTAACCTTACACAACAGCCAGGGGCTGGTGCCAGCCTCCTACAACAGCAAACAGGGTTTTAATGGGACCTTCGACATGGGGCCCTACTTCTGCGAGGCCATTGTCCGAGGGAAGACGTTCCAGACAATGCTGTTTAATATTGTTACTTTGAAAGCTGCACCACAGCTGGATCTTGAAATGGAAGCTCTGAAAACTGTGTATAAGTCCGGGGAAACTATCGAGGTCACCTGCGCTGTCTTTAACAATGAAGTGGTTGACCTTCAATGGAGTTACCCTGGAGTAGTGAAAGGCAAAGGCATCCTGAAGCTGCAGGAAATCAGATTTCCGACCATCAAGTTAGTGTACACTCTGACGGTCCCTGACGCCACAGTGAAAGATAGCGGCGACTATGAATGTATCGCTCGTCATGCCACCGAGGATGTCAAAGAAATGAAGAAAGTCACCATTTCCGTACATGAGAAAGGGTTTGTTGAGATCAGGCCTACTTTTGGCCACAAGGAAGCTGTCAACCTGCATGAAGTCAGACATTTTGTGGTGGACATACAGGCCTACCCACCTCCCCGGATAGCCTGGCTGAAGGACAACCTGACACTGATTGAAAACCTCACTGAGATCACCACTGATGTGGAAAAGATTCGGGAAATAAGGTATCGAAGCAAACTGAAGCTGATCCGTGCCAAGGAAGAAGACAGTGGCTATTATACTATTGTGGTTCAAAATGAAGACGACGTGAAGAGCTACACTTTTGAACTGTTAACTCAAGTTCCCTCATCCATCTTGGACCTGGTTGATGACCACCATGGCTCTGCAGGGGGACAGACTGTGAGGTGCATGGCTGAAGGCGTTCCTCTTCCTGACATTGAGTGGATGATCTGCAGGGACATTAAGAGATGTAATAATGAAACGTCTTGGACAGTTTTGGCCAACAATGTCTCAAATATCATCATGGAGATACATCCCCAGGGCAGGAGTATTGTGGAGGGCCGAGTGACATTCGCCAAAGTGGAGGAGACCATTGCAGTTCGATGTGTGGCCAAGAATCTCCTTGGGTCTGGGAACCGAGAGCTGAAGCTGGTGGTTCCCACCTTGCATTCTGAACTCACGGTGGCAGCTGCAGTCCTGGTGCTGTTGGTGATTGTGATCATCTCACTGATTGTCCTGGTTGTCATTTGGAAACAGAAACCGAGGTATGAAATTCGCTGGAGGGTCATTGAATCAATCAGCCCTGATGGACATGAATATATTTATGTGGACCCAATGCAACTGCCTTATGACTCCAGATGGGAATTTCCAAGAGATGGACTAGTGCTTGGTCGCATCCTGGGATCTGGTGCCTTTGGGAAAGTGGTGGAGGGAACAGCATACGGGCTAAGCCGCTCCCAGCCTGTTATGAAGGTGGCTGTGAAGATGCTCAAACCCACAGCCAGATCCAGTGAAAAACAAGCTCTCATGTCTGAACTGAAGATAATGACTCACCTGGGACCACATTTAAACATTGTGAACTTGCTGGGAGCCTGCACCAAGTCAGGCCCCATTTACATCATCACTGAATACTGCTTCTATGGAGATTTGGTCAACTATTTGCATAAGAATAGGGATAGCTTCCTGAGTCAGCACCCGGAGAAGCCTAAGAAAGAATTGGACATCTTTGGATTGAACCCTGCAGATGAAAGCACAAGGAGCTATGTGATTTTATCTTTTGAAAACAATGGTGACTATATGGACATGAAGCAAGCTGATGCCACACAGTACGTCCCCATGCTAGAAAGGAAGGAGGTTTCTAAATATTCGGATATCCAGAGATCGCTCTATGATCGTCCTGTCTCATATAAGAAGAAATCTATGCTAGATTCAGAAGTCAAAAACCTCCTCTCGGATGATAACTCTGAAGGCCTTACTTTGTTGGATTTGTTGAGCTTTACCTATCAAGTTGCCCGAGGAATGGAATTTTTGGCATCAAAAAACTGTGTCCACCGCGACCTGGCTGCTCGCAATGTCCTCCTGGCGCAAGGGAAAATCGTGAAGATCTGTGACTTTGGCTTGGCTCGAGACATCATGCATGATTCGAACTATGTGTCAAAAGGCAGTACCTTCTTGCCCGTGAAGTGGATGGCTCCTGAGAGCATCTTCGACAACCTCTACACCACCCTAAGTGACGTCTGGTCTTACGGCATTCTGCTCTGGGAGATCTTTTCTCTTGGTGGCACACCCTACCCTGGCATGATGGTGGATTCTACTTTCTACAACAAGATCAAGAGTGGGTACCGGATGGCCAAGCCTGACCATGCCACCAGTGAAGTCTATGACATCATGATGCAGTGCTGGAACAGCGAGCCAGAGAAGAGACCCTCCTTTTACCACCTGAGTGAGATTGTGGAGAGCCTGCTGCCAGGACAATACAAAAAGAGTTATGAGAAAATCCACTTGGACTTCCTGAAGAGTGACCATCCTGCTGTGGCCCGCATGCGCGTGGACTCAGACAACACATATATTGGTGTCATCTACAAAAATGAGGAAGACAAGCTGAAAGACTGGGAGGGTGGCCTGGATGAGCAGAGACTGAGCGCTGACAGTGGCTATATCATCCCGCTGCCCGACATCGATCCTGTGCCTGAGGAGGAAGACCTGGGCAAGAGGAACAGGCACAGCTCACAGACCTCTGAAGAAAGTGCCATTGAGACAGGTTCCAGCAGTTCCACCTTCATCAAGAGAGAGGACGAGACCATTGAGGACATCGACATGATGGATGACATTGGCATAGACTCCTCAGACCTGGTGGAGGACAGCTTCCTGTAA

Related Sequences

XP_004849766.1 Protein

Pdgfra PREDICTED: platelet-derived growth factor receptor alpha isoform X2 [Heterocephalus glaber]

Length: 1089 aa      View alignments
>XP_004849766.1
MGTSCPAFLVLGCLLTELSLILCQLPLPSILPNEDEKVVQLNSSFSLRCFGESEVSWKYPMTPGDVPDVEIRNEENNSGLFVAVLEVANALAAHTGWYTCYYNHTQTEEGEVQGRHLYVYVPDPDVAFLPLEMTDYIVLADTDDSAIIPCRTTDPKTPVTLHNSQGLVPASYNSKQGFNGTFDMGPYFCEAIVRGKTFQTMLFNIVTLKAAPQLDLEMEALKTVYKSGETIEVTCAVFNNEVVDLQWSYPGVVKGKGILKLQEIRFPTIKLVYTLTVPDATVKDSGDYECIARHATEDVKEMKKVTISVHEKGFVEIRPTFGHKEAVNLHEVRHFVVDIQAYPPPRIAWLKDNLTLIENLTEITTDVEKIREIRYRSKLKLIRAKEEDSGYYTIVVQNEDDVKSYTFELLTQVPSSILDLVDDHHGSAGGQTVRCMAEGVPLPDIEWMICRDIKRCNNETSWTVLANNVSNIIMEIHPQGRSIVEGRVTFAKVEETIAVRCVAKNLLGSGNRELKLVVPTLHSELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSQHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADATQYVPMLERKEVSKYSDIQRSLYDRPVSYKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYDIMMQCWNSEPEKRPSFYHLSEIVESLLPGQYKKSYEKIHLDFLKSDHPAVARMRVDSDNTYIGVIYKNEEDKLKDWEGGLDEQRLSADSGYIIPLPDIDPVPEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSDLVEDSFL