Details from NCBI annotation

Gene Symbol Clock
Gene Name clock circadian regulator, transcript variant X2
Entrez Gene ID 101725536

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLOCK ENSCPOG00000011807 (Guinea pig)

Gene Details

clock circadian regulator

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010620, Guinea pig)

Protein Percentage 95.68%
CDS Percentage 94.04%
Ka/Ks Ratio 0.12289 (Ka = 0.0242, Ks = 0.1973)

CLOCK ENSG00000134852 (Human)

Gene Details

clock circadian regulator

External Links

Gene Match (Ensembl Protein ID: ENSP00000308741, Human)

Protein Percentage 96.1%
CDS Percentage 93.42%
Ka/Ks Ratio 0.07741 (Ka = 0.0188, Ks = 0.2425)

Clock ENSMUSG00000029238 (Mouse)

Gene Details

circadian locomotor output cycles kaput

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000074656, Mouse)

Protein Percentage 95.67%
CDS Percentage 90.64%
Ka/Ks Ratio 0.05928 (Ka = 0.0224, Ks = 0.3779)

Clock ENSRNOG00000002175 (Rat)

Gene Details

clock circadian regulator (Clock), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002976, Rat)

Protein Percentage 94.42%
CDS Percentage 89.73%
Ka/Ks Ratio 0.07393 (Ka = 0.0298, Ks = 0.4028)

Genome Location

Sequence Coding sequence

Length: 2604 bp    Location: 13968523..14036164   Strand: +
>XM_004849704.1
ATGTTGTTTACCATAAGCTGTAGTAAAATGAGCTCGATTGTTGACAGAGATGACAGTAGTATTTTTGATGGGTTGGTGGAAGAAGATGACAAGGACAAAGCCAAAAGGGTATCTAGAAACAAATCTGAAAAGAAACGTAGAGATCAATTTAATGTTCTCATTAAAGAACTGGGATCCATGCTTCCTGGAAATGCTAGAAAGATGGACAAATCTACTGTTTTGCAGAAGAGCATTGACTTTTTACGCAAACATAAAGAAATCACTGCACAGTCAGATGCTAGTGAAATTCGACAAGACTGGAAACCTACATTCCTTAGTAATGAAGAGTTTACACAATTAATGTTAGAGGCTCTTGATGGTTTTTTTTTAGCAATCATGACAGATGGAAGTATAATATATGTGTCTGAGAGTGTAACTTCATTACTTGAACACTTACCATCTGATCTTGTAGATCAAAGTATATTTAATTTTATCCCAGAAGGGGAACATTCAGAGTTTTATAAAATACTCTCTACCCATCTGCTGGAAAGTGATTCATTAACTCCTGAATACTTAAAATCAAAAAACCAATTGGAATTCTGTTGTCATATGCTTCGAGGAACAATAGACCCAAAGGAGCCATCTACCTATGAATATGTGAGATTTATAGGAAATTTCAAATCTTTAAACAGCGTTTCCACTTCAGCACATAATGGTTTTGAAGGAACCATACAGCGCACACATAGGCCTTCTTATGAAGATAGAGTTTGTTTTGTAGCTACTGTCAGGTTAGCTACACCTCAGTTCATCAAGGAAATGTGTACTGTTGAAGAACCCAATGAAGAATTTACATCTAGACATAGTTTAGAATGGAAGTTTCTATTTCTAGATCACAGGGCACCACCAATAATAGGATATTTGCCATTTGAAGTTCTGGGAACATCAGGCTATGATTACTATCATGTGGATGACCTAGAAAATCTGGCAAAATGTCATGAGCACTTAATGCAATACGGGAAAGGTAAATCATGTTATTACAGGTTCCTGACCAAAGGGCAACAGTGGATTTGGCTTCAAACTCATTATTATATCACTTATCATCAGTGGAATTCAAGGCCGGAGTTTATTGTTTGTACACACACTGTAGTAAGTTACGCAGAAGTAAGGGCTGAAAGACGACGAGAACTTGGTATTGAAGAGTCTCTTCCTGAGACAGCTGCTGACAAAAGCCAAGATTCTGGGTCTGATAATCGAATAAACACGGTCAGTCTCAAAGAAGCATTGGAAAGGTTTGATCACAGCCCAACCCCTTCTGCCTCCTCCCGGAGTTCAAGAAAATCATCTCACACAGCAGTCTCAGACCCTTCCTCAACACCAACAAAGATCCCAACGGATACTAGCACTCCTCCCAGACAGCATTTACCAACTCATGAAAAGATGGCACAAAGGAGATCATCATTTAGTAGTCAATCCATAAATTCCCAGTCTGTTGGTCCTTCTTTAACACAGCCAGTGATGTCTCAAGCTGCAAATTTACCAATTCCACAAGGCATGTCTCAGTTTCAGTTTTCAGCTCAATTAGGAGCCATGCAGCATCTGAAAGACCAGTTGGAGCAACGGACACGGATGATAGAGGCAAATATTCATCGACAACAAGAAGAACTAAGGAAAATTCAAGAACAACTTCAAATGGTCCATGGTCAGGGGCTGCAGATGTTTTTGCAACAGTCAAACCCTGGATTGAATTTTGGTTCTGTTCAACTTTCTTCTGGAAATACATCTGCTATCCAGCAGCTCACATCTATAAATATGCAAAGCCAGGTTGTTCCTGCCAACCAGATTCAAAGTGGAATGAGTGCTGGACACATGGGCACAAGTCAGCACCTGATGCAACAACAGACTTTACAAAGTACATCAACTCAGCAAAGTCAACAGAGTGTACTGAGTGGGCACAGTCAACAAACATCTCTTCCCAGTCAGACGCAGAGCGCTCTTACGGCCCCACTGTATAACACGATGGTCATCTCTCAGCCTGCACCCGGGAGCATGGTCCAGATTCCATCCAGCATGTCACAGAACAGCACCCAGGGTGGTGCAGTAACCACATTCACTCAGGACAGACAAATAAGATTTTCTCAAGGTCAGCAACTTGTGACCAAATTAGTGACTGCTCCTGTAGCTTGTGGAGCAGTCATGGTACCTAGTACTATGCTTATGGGTCAGGTGGTGACTGCCTATCCTACTTTCACCACACAACAGCAGCAGGCACAGACTTTGTCGGTGACACAGCAGCAACAACAGCAGCAGCAACAACAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAGAGTTCCCAGGAGCAGCAGCTTCCTTCAGTTCAGCAACCATCTCAGGCTCAGTTGACCCATCCACCACAGCAGTTTTTACAGACTTCTAGATTGCTCCATGGGAATCCCTCAACTCAGCTCATCCTCTCTGCTGCATTTCCACTACAGCAGAGCACCTTCCCTCAGTCACATCACCAGCAACACCAGTCCCAGCAACCGCAGCAACTTGGTCGTCATAGGACTGACAGTTTGACTGATCCTTCTAAGGTTCAACCGCAGTAG

Related Sequences

XP_004849761.1 Protein

Clock PREDICTED: circadian locomoter output cycles protein kaput isoform X2 [Heterocephalus glaber]

Length: 867 aa      View alignments
>XP_004849761.1
MLFTISCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEFYKILSTHLLESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVRFIGNFKSLNSVSTSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSDNRINTVSLKEALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPTHEKMAQRRSSFSSQSINSQSVGPSLTQPVMSQAANLPIPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIEANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNTSAIQQLTSINMQSQVVPANQIQSGMSAGHMGTSQHLMQQQTLQSTSTQQSQQSVLSGHSQQTSLPSQTQSALTAPLYNTMVISQPAPGSMVQIPSSMSQNSTQGGAVTTFTQDRQIRFSQGQQLVTKLVTAPVACGAVMVPSTMLMGQVVTAYPTFTTQQQQAQTLSVTQQQQQQQQQQQQQQQQQQQQQQQQQQSSQEQQLPSVQQPSQAQLTHPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPQSHHQQHQSQQPQQLGRHRTDSLTDPSKVQPQ