Details from NCBI annotation

Gene Symbol Ythdc1
Gene Name YTH domain containing 1, transcript variant X3
Entrez Gene ID 101701368

Database interlinks

Part of NW_004624761.1 (Scaffold)

For more information consult the page for NW_004624761.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

YTHDC1 ENSCPOG00000010929 (Guinea pig)

Gene Details

YTH domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009820, Guinea pig)

Protein Percentage 98.31%
CDS Percentage 95.48%
Ka/Ks Ratio 0.03941 (Ka = 0.0075, Ks = 0.19)

YTHDC1 ENSG00000083896 (Human)

Gene Details

YTH domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000339245, Human)

Protein Percentage 98.01%
CDS Percentage 94.37%
Ka/Ks Ratio 0.03138 (Ka = 0.0086, Ks = 0.2732)

Ythdc1 ENSMUSG00000035851 (Mouse)

Gene Details

YTH domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039133, Mouse)

Protein Percentage 96.59%
CDS Percentage 92.09%
Ka/Ks Ratio 0.03545 (Ka = 0.0147, Ks = 0.4144)

Ythdc1 ENSRNOG00000001996 (Rat)

Gene Details

YTH domain containing 1 (Ythdc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002736, Rat)

Protein Percentage 96.16%
CDS Percentage 92.14%
Ka/Ks Ratio 0.04097 (Ka = 0.0165, Ks = 0.4031)

Genome Location

Sequence Coding sequence

Length: 2118 bp    Location: 374963..346851   Strand: -
>XM_004849650.1
ATGGCGGCCGACAGTCGGGAGGAGAAAGATGGAGAACTTAATGTTCTAGATGATATTTTAACTGAAGTCCCAGAACAGGATGATGAACTGTATAATCCAGAGAGTGAACAAGATAAAAACGAGAAAAAGGGGTCAAAAAGAAAAAGTGACCGAATGGAATCTACTGATGCCAAGCGACAAAAGCCTTCTGTCCATTCAAGACAGTTGATTTCTAAGCCACTAAGCTCATCTGTTAGCAATAACAAAAGAATTGTTAGTACAAAAGGAAAGCCAGTTGCAGAATATAAAAATGAGGAATATCAAAGATCTGAAAGAAATAAGCGTCTAGATGCTGATCGGAAAATTCGTCTATCAAGCAGTGCCTCCCGAGAACCTTATAAGAGTCAGCCTGAGAAAGCTTGTCTACGTAAAAGGGATCCTGAGAGGAGGGCCAAATCTCCTACACCAGATGTTTCTGAGAGAATTGGGCTAGAAGTTGATAGACGTGCAAGCAGATCCAGCCAGTCATCTAAGGAAGAAGTGAATTCTGAAGAGTATGGCTCTGACCATGAGACTGGCAGCAGTGGTTCTTCTGATGAGCAAGGCAACAATACTGAAAATGAGGAGGAAGGAGTGGAGGAAGATGTAGAGGAAGAAGAGGAGGTGGAAGAAGATGCAGAAGAAGAGGAGGAGGTAGATGAGGGAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAAGAGGAGGAAGAAGAATATGAACAAGATGAGAGAGACCAGAAGGAGGAGGGAAATGATTATGACACTCGAAGTGAGGCCAGTGACTCTGGTTCTGAATCTGTTTCCTTCACGGATGGATCTGTCAGGTCTGGTTCAGGCACAGATGGATCAGATGAGAAGAAGAAGGAAAGGAAGAGAGCTAGAGGCATATCACCAATTGTTTTTGATAGGAGTGGAAGCTCTGCATCAGAGTCATATGCAGATCAAACCAGTAAACTCAAATATGTCCTTCAGGATGCAAGATTTTTCCTCATAAAGAGTAACAACCATGAGAATGTGTCTCTTGCCAAAGCTAAGGGTGTATGGTCCACACTGCCTGTAAATGAGAAGAAGTTAAATCTTGCATTTAGATCTGCAAGGAGTGTTATCTTAATATTTTCTGTCAGGGAAAGTGGAAAATTTCAAGGCTTTGCAAGACTTTGTTCAGAATCTCACCATGGAGGGTCTCCTATACACTGGGTGCTTCCAGCAGGAATGAGTGCAAAAATGCTAGGTGGTGTCTTTAAAATTGACTGGATTTGCAGGCGTGAATTACCCTTCACAAAGTCAGCTCATCTCACCAATCCTTGGAATGAACATAAGCCAGTAAAGATTGGACGTGATGGACAGGAAATTGAACTTGAATGTGGAACCCAGCTTTGTCTTCTATTTCCCCCTGATGAAAGTATTGACTTGTATCAGGTCATTCATAAAATGCGTCACAAGAGAAGAATGCATTCTCAGCCCAGATCAAGAGGACGTCCATCCCGTCGAGAACCAGTCCGGGATGTGGGAAGGCGTCGACCAGAAGATTATGATATTCATAACAGCAGAAAGAAACCAAGGATTGACTATCCCCCTGAGTTTCACCAGAGACCAGGGTATTTAAAGGATCCAAGATACCAAGAAGTAGACAGACGATTTTCAGGAGTTCGCCGAGATGTGTTTTTAAATGGGTCCTACAATGATTATGTGAGGGAATTTCATAACATGGGACCACCGCCACCATGGCAAGGAATGCCCCCTTATCCAGGAATGGAACAGCCTCCACACCATCCTTACTATCAACACCATGCTCCACCTCCTCAAGCTCATCCCCCTTACTCAGGACATCATGCAGTACCACATGAAGCAAGATACAGAGATAAACGAGTACATGATTATGATATGAGGGTTGATGATTTCCTTCGTCGCACACAAGCGGTTGTCAGTGGCCGGAGAAGTAGACCCCGTGAAAGAGACCGGGAGCGGGAGCGTGACCGCCCTAGAGATAACAGAAGAGACAGAGAGCGAGATAGAGGACGGGACCGAGAAAGAGAAAGGGAGCGACTCTGTGACCGGGACAGAGACCGAGGGGAGAGAGGTCGATATCGAAGATAA

Related Sequences

XP_004849707.1 Protein

Ythdc1 PREDICTED: YTH domain-containing protein 1-like isoform X3 [Heterocephalus glaber]

Length: 705 aa      View alignments
>XP_004849707.1
MAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSDRMESTDAKRQKPSVHSRQLISKPLSSSVSNNKRIVSTKGKPVAEYKNEEYQRSERNKRLDADRKIRLSSSASREPYKSQPEKACLRKRDPERRAKSPTPDVSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEEEEVEEDAEEEEEVDEGEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYADQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLCSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHAVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERERLCDRDRDRGERGRYRR