Sequence details NCBI ID: XM_004849616.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rc3h2
Gene Name ring finger and CCCH-type domains 2
Entrez Gene ID 101700691

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RC3H2 ENSCPOG00000008511 (Guinea pig)

Gene Details

ring finger and CCCH-type domains 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007652, Guinea pig)

Protein Percentage 94.59%
CDS Percentage 93.9%
Ka/Ks Ratio 0.2382 (Ka = 0.0371, Ks = 0.1556)

RC3H2 ENSG00000056586 (Human)

Gene Details

ring finger and CCCH-type domains 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000362774, Human)

Protein Percentage 94.36%
CDS Percentage 92.64%
Ka/Ks Ratio 0.17085 (Ka = 0.0371, Ks = 0.2171)

Rc3h2 ENSMUSG00000075376 (Mouse)

Gene Details

ring finger and CCCH-type zinc finger domains 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000097721, Mouse)

Protein Percentage 92.51%
CDS Percentage 90.28%
Ka/Ks Ratio 0.14272 (Ka = 0.0454, Ks = 0.3183)

Rc3h2 ENSRNOG00000009196 (Rat)

Gene Details

ring finger and CCCH-type domains 2 (Rc3h2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012354, Rat)

Protein Percentage 92.63%
CDS Percentage 90.59%
Ka/Ks Ratio 0.15609 (Ka = 0.0465, Ks = 0.2977)

Genome Location

Sequence Coding sequence

Length: 2613 bp    Location: 12025202..12070558   Strand: +
Raw sequence   
>XM_004849616.1
ATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAATTTGATGAGAATGTGCACAAACCCATCAGTTTAGGTTGTTCACACACTGTTTGCAAGACCTGCTTAAATAAACTTCACCGAAAAGCTTGTCCTTTTGACCAGACTGCCATCAACACGGACATTGACGTGCTTCCTGTCAACTTCGCACTTCTCCAGTTAGTTGGAGCCCAGGTACCAGATCATCAGTCAATAAAGTTAAGTAGTGTAGGTGAGAATAAACACTATGAGGTTGCAAAGAAATGTGTTGAGGATTTGGCGCTCTACTTAAAACCACTAAGTGGAGGTAAAGGCATAGCTAGTTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAATTGGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAAGGTCGAGTCAGAGCCATGCGAGCAGCCCGTTCACTTGGAGAAAGAACTGTAACAGAACTGATATTACAGCACCAGAATCCTCAACAGTTATCTGCCAATCTATGGGCTGCTGTCAGGGCTCGAGGATGCCAGTTTCTAGGCCCAGCTATGCAAGAAGAGGCCTTGAAGCTGGTGTTGCTGGCATTAGAAGATGGTTCTGCTCTCTCACGGAAAGTTTTGGTACTTTTTGTTGTGCAAAGACTAGAACCAAGATTTCCTCAGGCATCAAAAACAAGTATTGGTCATGTTGTGCAACTACTGTATCGAGCTTCGTGTTTTAAGGTTACCAAAAGGGATGAAGACTCTTCCCTGATGCAGCTAAAGGAGGAATTTCGGAGTTATGAGGCACTGCGCAGAGAACATGATGCCCAAATTGTTCATATTGCTATGGAAGCAGGACTCCGTATTTCACCTGAGCAGTGGTCTTCACTCTTATATGGTGACTTGGCTCATAAATCACATATGCAGTCCATCATTGATAAGCTGCAGTCTCCAGAATCATTTGCAAAGAGTGTCCAAGAATTGACAATTGTTTTGCAACGAACAGGTGATCCAGCTAACTTAAATAGATTGAGGCCTCATTTAGAGCTTCTTGCAAACATAGACCCTAATCCAGATGCTGTTTCACCAACTTGGGAGCAGCTAGAGAATGCAATGGTAGCTGTTAAAACAGTGGTCCATGGCCTTGTGGACTTCATACAGAATTACAGTAGAAAAGGCCATGAAACACCTCAGCCTCAACCAAACAGCAAATACAAGACTAGCATGTGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACGAGGAACAAATTGTACCTTTGCCCATTCTCAGGAAGAGCTTGAAAAGTATCGATTAAGGAACAAAAAGATCAATGCAACTGTAAGAACGTTTCCTCTTCTAAATAAAGTTGGTGTAAACAACACTGTCACAACCACAGCCGGAAATGTCATTTCTGTCATAGGAAGTACTGAAACAACGGGGAAAATTGTTCCAAGTACAAATGGAATTTCAAATTCAGAAAACAGTGTTTCCCAGCTAATCCCTCGTAGTACTGACAGTGCATTAAGAGCTCTGGAGACTGTGAAGAAAGTGGGGAAAGTTGGCACTAATGGTCAGAATGCTGCTGGTGGGCCCTCTGGAGAGTCTGTAACTGAAAATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAACATAGCTGCTACCTCAGCTGGGCCCTCTAATGTTGGAACAGAGCTGAATTCTGTGCCTCCAAAATCCAGCCCATTTCTAACTAGAGTACCAGTATATCCTCAGCATTCTGAAAACATTCAGTATTTTCAAGATCCAAGGACTCAGATACCCTTTGAAGTCCCACAATACCCACAGACAGGATACTACCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGTGAGGTCCAATAATGTTCCAGAGTCCTCCCTCCCACCTGCTTCCATGCCATATGCTGATCATTACAGTACATTTTCCCCTCGAGATCGAATGAATTCTTCTCCTTACCAACCTCCTCCTCCGCAGCAGTATGGACCAGTTCCCCCAGTACCTTCTGGAATGTATGCTCCTGTGTATGACAGCAGGCGCATCTGGCGCCCACCAATGTACCAACGAGATGACATTATTAGAAGCAATTCTTTACCTCCAATGGATGTGATGCACTCATCTGTTTATCAGACGTCTTTGCGGGAAAGATATAACTCATTAGATGGATATTATTCAGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACGACTGTGCCTTTACCAAGGGAACCTTGTGGTCATTTAAAGACCAGCTGTGAGGAGCAGATAAGAAGAAAGCCAGACCAGTGGGCACAGTACCACACTCAGAAAGCACCTGTCTCTTCTACTCTTCCTGTGGCAACACAGTCTCCAACACCACCTTCTCCTCTATTCAGTGTAGACTTCCATTTAAGCCTGTACATTATAGAATCTGATGACTTGGCAAAAGAATCAGGTGCTTTCAGCTTTCTTGAGAAAACCCTGTATGTAGCGTTTGCACTGACTAACAGGATGGTTGATAAGACTATGAACCATGTAATAGTAGAACATTGGCTAACATTTGCTCATATTTAA

Related Sequences

XP_004849673.1 Protein

Rc3h2 PREDICTED: RING finger and CCCH-type zinc finger domain-containing protein 2 [Heterocephalus glaber]

Length: 870 aa      View alignments
>XP_004849673.1
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQSIKLSSVGENKHYEVAKKCVEDLALYLKPLSGGKGIASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVIGSTETTGKIVPSTNGISNSENSVSQLIPRSTDSALRALETVKKVGKVGTNGQNAAGGPSGESVTENKIGSPPKTPVSNIAATSAGPSNVGTELNSVPPKSSPFLTRVPVYPQHSENIQYFQDPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYSTFSPRDRMNSSPYQPPPPQQYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPMDVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPDQWAQYHTQKAPVSSTLPVATQSPTPPSPLFSVDFHLSLYIIESDDLAKESGAFSFLEKTLYVAFALTNRMVDKTMNHVIVEHWLTFAHI