Sequence details NCBI ID: XM_004849602.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sptan1
Gene Name spectrin, alpha, non-erythrocytic 1
Entrez Gene ID 101701130

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPTAN1 ENSCPOG00000009432 (Guinea pig)

Gene Details

spectrin, alpha, non-erythrocytic 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008468, Guinea pig)

Protein Percentage 94.49%
CDS Percentage 90.5%
Ka/Ks Ratio 0.06333 (Ka = 0.0324, Ks = 0.5116)

SPTAN1 ENSG00000197694 (Human)

Gene Details

spectrin, alpha, non-erythrocytic 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000361824, Human)

Protein Percentage 98.45%
CDS Percentage 90.41%
Ka/Ks Ratio 0.011 (Ka = 0.0069, Ks = 0.6286)

Sptan1 ENSMUSG00000057738 (Mouse)

Gene Details

spectrin alpha, non-erythrocytic 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109348, Mouse)

Protein Percentage 98.18%
CDS Percentage 88.99%
Ka/Ks Ratio 0.01039 (Ka = 0.0081, Ks = 0.7809)

Sptan1 ENSRNOG00000015396 (Rat)

Gene Details

spectrin, alpha, non-erythrocytic 1 (Sptan1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042382, Rat)

Protein Percentage 97.73%
CDS Percentage 88.66%
Ka/Ks Ratio 0.01338 (Ka = 0.011, Ks = 0.8226)

Genome Location

Sequence Coding sequence

Length: 7182 bp    Location: 6386231..6331766   Strand: -
Raw sequence   
>XM_004849602.1
ATGTTGTCATCGTTTCGTAAACGCAGAGTCCAGAAAATGGACCCAAGCGGGGTCAAGGTGCTGGAAACAGCAGAGGACATCCAGGAGAGGAGGCAGCAGGTCCTGGACCGGTACCATCGCTTCAAGGAGCTCTCAACCTTGCGGCGTCAGAAGCTGGAAGATTCCTATCGATTCCAGTTTTTCCAAAGAGATGCTGAGGAGCTTGAGAAATGGATTCAGGAAAAACTTCAAATTGCATCCGATGAGAATTACAAAGACCCAACCAACTTGCAGGGAAAGCTTCAGAAGCACCAGGCCTTTGAAGCTGAAGTGCAGGCCAATTCTGGAGCCATCGTCAAGCTGGATGAAACTGGAAACTTGATGATCTCTGAAGGCCATTTTGCATCGGAAACCATCCGGGAACAGCACCCTGAGGAGGAGCTGATCAAGACCAAGCAGGATGAAGTGAATGCTGCCTGGCAGCGGCTCAAGGGCCTGGCTCTCCAGAGACAGGGGAAGCTGTTTGGGGCAGCTGAGGTGCAGCGCTTTAACAGGGATGTGGATGAGACCATCAGCTGGATTAAGGAGAAGGAGCAGCTGATGGGCTCGGACGATTTTGGACGAGACCTAGCAAGTGTTCAGGCCCTGTTGCGGAAGCACGAGGGTCTGGAGAGAGACCTTGCTGCCCTAGAGGACAAGGTTAAGGCCCTGTGTGCAGAGGCCGACCGCCTGCAGCAGTCCCACCCTATGAGCGCCAGCCAAATCCACATGAAGCGAGAGGAGCTGATCGCCAACTGGGAGCAGATCCGCACACTTGCGGCAGAGAGACACGCACGGCTCAACGACTCGTACAGGCTCCAGCGCTTCCTTGCTGACTTCCGAGACCTCACCAGCTGGGTCACTGAGATGAAAGCCCTCATCAATGCGGACGAGCTCGCCAATGATGTGGCTGGGGCTGAGGCCCTGCTGGACAGACATCAGGAGCACAAGGGTGAAATCGATGCCCATGAAGACAGCTTTAAGTCCGCAGATGAGTCTGGACAGGTGCTGCTGGCTGCTGGTCACTACGCCTCAGATGAAGTCAGGGAGAAGCTGACTGTCCTCTCGGAGGAGAGGGCTGCGCTGCTGGAGCTCTGGGAGCTGCGCAGGCAGCAATACGAGCAGTGCATGGACCTGCAGCTCTTCTACCGAGACACGGAGCAGGTGGACAACTGGATGAGCAAACAGGAGGCATTCCTGCTGAATGAAGACTTGGGCGACTCCTTGGACAGTGTAGAAGCGCTTCTCAAGAAGCACGAGGACTTTGAGAAATCTCTTAGTGCCCAGGAGGAAAAGATTACAGCGCTGGATGAGTTTGCAACCAAGCTAATCCAGAACAACCACTATGCGATGGAAGATGTGGCCACTCGCCGAGACGCTCTGCTGAGTCGCCGCAATGCCCTTCATGAGCGAGCCATGCATCGACGGGCCCAGCTGGCCGACTCCTTCCACTTGCAGCAGTTCTTCCGTGATTCTGATGAGCTCAAGAGTTGGGTCAACGAGAAGATGAAAACTGCCACGGATGAAGCTTATAAGGACCCGTCCAATCTGCAAGGAAAAGTACAGAAGCATCAGGCTTTTGAGGCTGAGCTCTCTGCAAACCAGAGCCGCATTGATGCCCTGGAGAAGGCTGGGCAAAAGCTCATCGATGTCAACCACTATGCCAAGGACGAAGTAGCCGCTCGGATGAATGAGGTCATCAGCTTGTGGAAGAAGCTGCTAGAGGCCACGGAACTGAAAGGAATCAAGCTTCGTGAAGCGAACCAGCAACAGCAATTTAATCGCAATGTGGAAGACATTGAATTGTGGCTGTATGAAGTAGAAGGTCACTTGGCTTCTGATGATTATGGCAAAGACCTTACCAACGTCCAGAACCTGCAGAAGAAGCATGCTCTGCTGGAGGCGGATGTGGCTGCTCACCAGGATCGGATCGATGGCATCACCATTCAGGCCCGCCAGTTTCAGGATGCTGGCCATTTTGATGCTGAAAACATTAAGAAGAAGCAGGAGGCGCTGGTGGCTCGCTATGAGGCCCTTAAGGAACCCATGGTTGCCCGGAAGCAGAAGCTGGCAGATTCTCTGCGTCTGCAGCAGCTCTTCCGTGACGTGGAAGACGAGGAGACATGGATACGAGAGAAGGAGCCCATTGCGGCATCTACCAACAGAGGCAAGGACTTAATTGGAGTCCAGAATCTGCTAAAGAAACATCAAGCTTTACAAGCAGAAATTGCCGGACACGAACCCCGCATCAAAGCAGTGACCCAGAAGGGGAACGCCATGGTGGAGGAAGGCCACTTTGCTTCAGAGGACGTGAAGGCCAAGCTCAATGAGCTGAACCAGAAGTGGGAGGCCCTGAAAGCCAAGGCCTCCCAGCGGCGGCAGGACCTGGAGGACTCGCTGCAGGCCCAGCAGTACTTTGCTGACGCCAACGAGGCCGAGTCATGGATGAGGGAGAAGGAGCCCATCGTGGGCAGCACGGACTATGGGAAGGACGAGGACTCTGCTGAGGCTCTGCTAAAGAAACACGAAGCTTTGATGTCGGACCTCAGTGCCTATGGCAGCAGCATCCAGGCTCTTCGGGAGCAGGCACAGTCATGCCGGCAACAAGTGGCCCCCATGGATGACGAGACTGGGAAGGAGCTGGTCTTGGCTCTCTATGACTATCAGGAGAAGAGTCCTCGCGAGGTGACCATGAAGAAAGGGGACATCCTCACCCTGCTTAACAGCACCAACAAGGACTGGTGGAAAGTGGAAGTGAATGATCGTCAGGGTTTCGTGCCTGCTGCTTACGTGAAGAAGCTGGACCCTGCCCAGTCAGCGTCCCGGGAGAACCTGCTGGAGGAGCAGGGCAGTATCACGCTTCGGCAGGAGCAGATCGACAACCAGACACGCATTACTAAGGAGGCCGGCAGTGTATCTCTGCGTATGAAACAGGTGGAAGAACTATACCACTCGCTGCTGGAACTGGGCGAGAAGCGCAAAGGCATGTTGGAGAAGAGCTGCAAGAAGTTCATGCTGTTCCGCGAGGCCAACGAGCTGCAGCAGTGGATCCACGAGAAGGAGGCGGCGCTGACGAGCGAGGAGGTTGGTGCTGACCTGGAGCAGGTGGAGGTGCTGCAGAAAAAGTTCGACGACTTCCAGAAGGATCTGAAGGCCAATGAGTCCCGGCTGAAGGACATTAACAAGGTGGCGGAGGACCTGGAATCTGAAGGTCTGATGGCAGAGGAGGTGCAGGCTGTGCAGCAGCAGGAGGTGTATGGCGTGATGCCCCGGGATGAAGGGGATTCCAAGACCACCTCCCCGTGGAAGTCTGCTCGTCTGATGGTTCACACTGTGGCTACCTTCAATTCCATCAAGGAGCTGAATGAGCGCTGGCGGTCCCTGCAGCAGCTGGCTGAGGAGCGGAGCCAGCTCCTGGGCAGTGCTCACGAAGTGCAGAGGTTCCACAGAGACGCAGATGAGACAAAAGAGTGGATTGAAGAGAAGAATCAGGCTCTCAACACAGACAACTATGGCCATGATCTGGCCAGTGTCCAGGCCCTACAGCGCAAGCATGAGGGCTTTGAGAGGGACCTTGCAGCTCTGGGGGATAAGGTCAACTCCCTCGGTGACACAGCCCAGCGCCTGATCCAGTCCCACCCCGAGGCTGCAGAGGACCTTAAAGAGAAGTGCACTGAGTTAAACCAGGCCTGGACCAGCCTGGGCAAACGCGCTGACCAGCGCAAGGCCAAGCTGGGTGACTCCCATGACCTGCAGCGCTTCCTTAGTGATTTCCGGGACCTCATGTCTTGGATCAATGGAATCCGGGGGCTGGTGTCCTCAGATGAGCTAGCCAAGGATGTCACCGGAGCCGAGGCGTTGCTGGAGCGGCACCAGGAACACCGGACGGAAATTGATGCCAGAGCTGGCACTTTCCAGGCATTTGAGCAGTTTGGGCAGCAGCTGTTGGCTCATGGGCACTATGCCAGCCCTGAGATCAAGGAGAAACTTGACATCCTCGATCAGGAGCGTGCAGACCTGGAGAAGGCCTGGGTTCAGCGCAGGATGATGCTGGATCAGTGCCTCGAGCTGCAGCTGTTCCATCGGGACTGTGAGCAAGCCGAGAGCTGGATGGCCGCGCGGGAAGCTTTCCTGGACACCGAGGACAAAGGAGACTCGCTGGACAGTGTGGAAGCTCTCATCAAGAAGCATGAGGACTTTGACAAAGCTATCAATGTCCAGGAGGAGAAGATCGCTGCCCTGCAGGCCTTTGCCGATCAGCTCATCGTGGCTGGCCACTATGCCAAAGGGGACATTGCCACCCGGCGCAATGAGGTCTTGGACAGGTGGCGACGCCTAAAAGCCCAGATGATTGAGAAAAGGTCAAAGCTTGGAGAGTCCCAGACCCTGCAGCAGTTCAGCCGGGACGTGGATGAGATCGAGGCTTGGATCAGTGAAAAGCTACAGACAGCGAGCGATGAGTCGTACAAGGACCCCACCAACATCCAGCTTTCCAAGCTGCTGAGCAAGCACCAGAAACACCAGGCCTTCGAAGCCGAACTGCATGCCAATGCTGACCGCATCCGTGGCGTCATCGACATGGGCAACTCCCTCATTGATCGAGGTGCCTGCGCCGGCAGCGAGGACGCGGTGAAGGCCCGCCTGGCCGCCCTCGCCGACCAGTGGCAGTTCCTGGTGCAGAAGTCCGCTGAGAAGAGCCAGAAGCTGAAAGAGGCCAACAAGCAGCAGAACTTCAACACTGGCATCAAGGACTTTGACTTCTGGCTCTCTGAGGTGGAAGCCCTTCTGGCATCCGAAGACTACGGCAAAGATCTGGCCTCTGTGAACAACCTGCTGAAGAAGCATCAGCTGCTGGATGCGGACATCTCAGCCCACGAGGATCGCTTAAAGGACCTGAACAGCCAGGCCGACAGCCTGATGACCAGTAGTGCCTTCGACACCTCCCAAGTGAAGGACAAGCGGGACACCATCAACGGGCGCTTCCAGAAGATCAAGAGCATGGCGGCCTCCCGGCGCGCCAAGCTGAGCGAGTCCCACCGCTTGCACCAGTTCTTCCGGGACATGGACGATGAGGAGTCCTGGATCAAAGAGAAGAAGCTGCTGGTCAGCTCTGAGGACTATGGCCGCGACCTCACCGGCGTGCAGAACCTGAGGAAGAAGCACAAGAGGCTGGAGGCAGAGCTGGCCGCACATGAGCCGGCCATTCAGGGCGTCCTGGACACAGGCAGGAAGCTGTCTGATGACAACACCATCGGGCAGGAGGAGATCCAGCAGCGCCTGGCCCAGTTCGTGGAGCACTGGCAGGAGCTGAAGCAGCTGGCGGCTGCACGGGGTCAGCGGCTAGAGGAGTCCTTGGAGTATCAGCAGTTTGTAGCCAACGTGGAAGAGGAGGAAGCGTGGATCAATGAGAAGATGACGCTGGTGGCCAGTGAAGATTACGGAGACACTCTGGCTGCCATCCAGGGCTTGCTGAAGAAACATGAAGCCTTTGAGACTGACTTCACTGTGCACAAGGACCGCGTGAATGATGTCTGCACAAATGGACAGGACCTCATTAAGAAGAACAATCACCATGAGGAGAACATCTCCTCGAAGATGAAGGGCCTGAATGGGAAGGTGTCCGACCTGGAGAAGGCTGCAGCCCAGAGGAAGGCAAAACTGGATGAGAACTCAGCCTTCCTACAGTTCAACTGGAAGGCAGACGTGGTGGAGTCCTGGATCGGTGAAAAGGAAAACAGCTTGAAGACAGATGACTATGGCCGAGACCTATCTTCCGTCCAGACTCTCCTCACCAAGCAGGAGACCTTCGATGCAGGCCTGCAGGCATTCCAGCAGGAGGGCATCGCCAACATCACCGCCCTCAAAGACCAGCTGCTGGCCGCCAAGCACATCCAGTCAAAGGCCATCGAGGCCCGGCATGCCTCGCTCATGAAGAGGTGGAGCCAGCTCCTGGCCAACTCGGCTGCCCGGAAGAAGAAGCTGCTGGAGGCCCAGAGCCATTTCCGCAAGGTGGAGGACCTCTTCCTGACCTTTGCCAAAAAGGCATCAGCCTTCAACAGCTGGTTTGAGAATGCAGAGGAGGACTTGACGGACCCTGTGCGCTGCAACTCCCTGGAAGAGATCAAAGCCTTGCGCGAGGCCCACGACGCCTTCCGCTCCTCCCTCAGCTCCGCACAGGCTGACTTCAACCAGCTGGCTGAGCTGGACCGCCAGATCAAGAGCTTCCGCGTGGCCTCCAACCCCTACACCTGGTTCACCATGGAGGCCCTGGAGGAGACCTGGAGGAACCTGCAGAAGATCATCAAGGAGCGTGAGCTGGAGCTGCAGAAGGAGCAGCGGCGGCAGGAGGAGAACGACAAGCTGCGCCAGGAGTTTGCGCAGCACGCCAATGCTTTCCACCAGTGGATCCAGGAGACCAGAACCTACCTCCTCGACGGGTCCTGCATGGTGGAAGAATCTGGAACCCTCGAGTCCCAGCTTGAAGCCACCAAACGCAAGCACCAGGAGATCCGAGCCATGCGGAGTCAGCTGAAGAAGATCGAGGACTTGGGAGCCGCCATGGAGGAGGCCCTCATCCTGGACAACAAGTACACGGAGCACAGCACTGTGGGCCTGGCCCAGCAGTGGGACCAGCTGGACCAGCTGGGCATGCGCATGCAGCACAACCTGGAGCAGCAGATCCAGGCCAGGAACACAACAGGTGTGACCGAGGAGGCCCTCAAGGAGTTCAGCATGATGTTTAAACACTTTGACAAGGATAAGTCCGGCAGGCTGAACCACCAGGAGTTCAAGTCCTGCCTGCGCTCGCTGGGCTACGACCTCCCCATGGTGGAGGAAGGGGAGCCCGACCCTGAGTTTGAGGCCATCCTGGACACGGTGGATCCCAACAGGGATGGTCATGTCTCCCTGCAAGAGTACATGGCTTTCATGATCAGCCGCGAGACGGAGAATGTCAAGTCCAGCGAGGAGATCGAGAGCGCCTTCCGGGCCCTCAGCTCCGAGGGGAAGCCCTACGTCACCAAGGAGGAGCTCTACCAGAACCTGACCCGGGAACAGGCCGACTACTGCGTGTCCCACATGAAGCCCTATGTGGACGGCAAGGGCCGCGAGCTGCCCTCGGCCTTCGACTACGTGGAGTTCACCCGCTCGCTCTTCGTGAACTGA

Related Sequences

XP_004849659.1 Protein

Sptan1 PREDICTED: spectrin alpha chain, non-erythrocytic 1 [Heterocephalus glaber]

Length: 2393 aa      View alignments
>XP_004849659.1
MLSSFRKRRVQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIREQHPEEELIKTKQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMGSDDFGRDLASVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPMSASQIHMKREELIANWEQIRTLAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSADESGQVLLAAGHYASDEVREKLTVLSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMHRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKLADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGNAMVEEGHFASEDVKAKLNELNQKWEALKAKASQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQVAPMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSITLRQEQIDNQTRITKEAGSVSLRMKQVEELYHSLLELGEKRKGMLEKSCKKFMLFREANELQQWIHEKEAALTSEEVGADLEQVEVLQKKFDDFQKDLKANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGVMPRDEGDSKTTSPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGDTAQRLIQSHPEAAEDLKEKCTELNQAWTSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAESWMAAREAFLDTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIVAGHYAKGDIATRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDMGNSLIDRGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLDADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRDTINGRFQKIKSMAASRRAKLSESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGRKLSDDNTIGQEEIQQRLAQFVEHWQELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCTNGQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIANITALKDQLLAAKHIQSKAIEARHASLMKRWSQLLANSAARKKKLLEAQSHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCVSHMKPYVDGKGRELPSAFDYVEFTRSLFVN