Details from NCBI annotation

Gene Symbol Sohlh1
Gene Name spermatogenesis and oogenesis specific basic helix-loop-helix 1
Entrez Gene ID 101723233

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOHLH1 ENSCPOG00000021094 (Guinea pig)

Gene Details

spermatogenesis and oogenesis specific basic helix-loop-helix 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015522, Guinea pig)

Protein Percentage 46.54%
CDS Percentage 58.7%
Ka/Ks Ratio 0.41201 (Ka = 0.5365, Ks = 1.3021)

SOHLH1 ENSG00000165643 (Human)

Gene Details

spermatogenesis and oogenesis specific basic helix-loop-helix 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000404438, Human)

Protein Percentage 39.46%
CDS Percentage 52.52%
Ka/Ks Ratio 0.28407 (Ka = 0.6549, Ks = 2.3055)

Sohlh1 ENSMUSG00000059625 (Mouse)

Gene Details

spermatogenesis and oogenesis specific basic helix-loop-helix 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000076253, Mouse)

Protein Percentage 37.64%
CDS Percentage 52.81%
Ka/Ks Ratio 0.42363 (Ka = 0.6705, Ks = 1.5827)

Sohlh1 ENSRNOG00000033983 (Rat)

Gene Details

spermatogenesis and oogenesis specific basic helix-loop-helix 1 (Sohlh1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042351, Rat)

Protein Percentage 41.29%
CDS Percentage 53.75%
Ka/Ks Ratio 0.37791 (Ka = 0.6373, Ks = 1.6863)

Genome Location

Sequence Coding sequence

Length: 1473 bp    Location: 1161495..1154871   Strand: -
>XM_004849587.1
ATGCAGAGAAACGATGGCGGCTGGGGGGGCAAAGAACCTGTGAGCCTGGACGACCCACTCACACCCCTGCGGGGTTTCCGGCGCCTGTCCGCGTGCGCCCCCTGCCGGCCGCACCGAGTCTGTGACGGCGTCGGGCTGAGCCTGGGCCTGGCAGCTGCTGTCTCCTGCGGGTCCCTCCTGTCCCGGGACTCAGACACAGCCCTCGGAGCCCCCTGGCTGCGTCCACCGCCACTCACAAGCCTGAGTGAGGTGGCGCTCCTGACCCAACGAGCAGATGGAGATGCTCACAGGGCTGTCAGCCAGCACCTTCGCACCCACCCTTGTGAGGAGCTCCGGAGCCAGACCGCGCTCCTGCCTGGGGTCCAGAGGCCGCGGCGAAGGGGGCTCGAGACTCCCGGGAAGGCGGAGCCTGGAGGCTGCTCCCTGGTGGGACCCCCATTAGCCGGCTCTTCCGCGTCCGAGGACCCCATGCAGGTCCCAAGCCTGGCCAAGAACGCTTCGGCTGCCAAGGACCCGGTCCTCCCAAGGAACGTGCTCAGCGAGAGGGAGCGCAGAAAGCGGATCTCAGCGAGCTGTGAGCGCCTTCGGGCCCTGCTGCCCAGCTTTGACGGCCGGAGGGAGGACATGGCATCTGTTCTGGAGATGGCCGTGCAGTTCCTGAGGCTGGCGCACAGCCTGGGGCCCGGCTGGGAGCAGCACCGCGTGCCCGCTCCATCGAGGGCCACGTGGCACACGTGGCAGGGGGACGTTATGCAGTGGACCCTGACGAGCCAGGTTTCAGCAGGCGGGTCAGACCCCGGGACAGTGGCATCCGGCCTGACTCCGCAGCAAGACCCGCTGGGCTGTCCGGCCCGGGGTGTAGGCGAGAGCATGGCCCCCGCCGGGTTGTCAGAGCGGCTGGACGGGCTGCCCAGCCTACCTGGTAAGTGTGAGCACACCCTTCCAGCCCTGACTGTGATGTCGCCCTTTGTTGTCTGCTGCTATGGTGGAGCCCTGGGCGGCTGTGGGGAGGCATCAGGGTCGCCCTGGGGTGCCTCTGATGAGCCCGTGGCCCTGTCCTTCCTGGTTGCTCATTGCTGCATAAACAACAGGCCAGCAGAGCTGCACACAGGCCGGCGCCGGGCCGTGGCCTCTGCCTTCTGCTCGCTGCTTGCGCATGGAGCTCCCGGGGCAGGGCCTTTGCGTGCCAGGGCCCTGGGACGTCCCTTGAGGTGGCCGGGTCTGGGTCCACCTGTGGCCACCTTCCTGCTTGCAGGGCCCGTGGAGGCCAGAGGAGCCACCCCATCTGGGGCCCCAGCCAGGAGCAGCCCCGTGGACAGGGCAGAGCCGGGCTTCCTGGACGACCCTGTGCCCAGCCCCCAGGAGCCCCAGGATGGCCCCCTGGAGCTGTGGGGCTCAGACATGGACAGCTGGGGCCTGGACCTGCAGGATGACAGCGTGGACGGCATCTTTGCTGACTTCCTGGGCTGCTAG

Related Sequences

XP_004849644.1 Protein

Sohlh1 PREDICTED: spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1 [Heterocephalus glaber]

Length: 490 aa      View alignments
>XP_004849644.1
MQRNDGGWGGKEPVSLDDPLTPLRGFRRLSACAPCRPHRVCDGVGLSLGLAAAVSCGSLLSRDSDTALGAPWLRPPPLTSLSEVALLTQRADGDAHRAVSQHLRTHPCEELRSQTALLPGVQRPRRRGLETPGKAEPGGCSLVGPPLAGSSASEDPMQVPSLAKNASAAKDPVLPRNVLSERERRKRISASCERLRALLPSFDGRREDMASVLEMAVQFLRLAHSLGPGWEQHRVPAPSRATWHTWQGDVMQWTLTSQVSAGGSDPGTVASGLTPQQDPLGCPARGVGESMAPAGLSERLDGLPSLPGKCEHTLPALTVMSPFVVCCYGGALGGCGEASGSPWGASDEPVALSFLVAHCCINNRPAELHTGRRRAVASAFCSLLAHGAPGAGPLRARALGRPLRWPGLGPPVATFLLAGPVEARGATPSGAPARSSPVDRAEPGFLDDPVPSPQEPQDGPLELWGSDMDSWGLDLQDDSVDGIFADFLGC