Details from NCBI annotation

Gene Symbol Lcn6
Gene Name lipocalin 6
Entrez Gene ID 101721122

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000014285 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012871, Guinea pig)

Protein Percentage 75.56%
CDS Percentage 85.74%
Ka/Ks Ratio 0.3057 (Ka = 0.1303, Ks = 0.4261)

Lcn6 ENSMUSG00000045684 (Mouse)

Gene Details

lipocalin 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109837, Mouse)

Protein Percentage 70.0%
CDS Percentage 75.19%
Ka/Ks Ratio 0.1312 (Ka = 0.195, Ks = 1.4861)

Lcn6 ENSRNOG00000028095 (Rat)

Gene Details

lipocalin 6 (Lcn6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033421, Rat)

Protein Percentage 70.0%
CDS Percentage 76.11%
Ka/Ks Ratio 0.1199 (Ka = 0.1745, Ks = 1.4558)

Genome Location

Sequence Coding sequence

Length: 573 bp    Location: 1066560..1069469   Strand: +
>XM_004849581.1
ATGGGGGTGGCCCAGCTGACCCCTCTCCTGGCTTTGATGTCCACGCCCAGGGCCCAGGCCGTGTGGCTGGGGAGACTGGATCCCTGCAGCAGGCAGCTCCTGGGGCCCTGGTACGTCCTCGCTGTGGCCTCCAGAGAGAAGGGCTTCACGCTGGAGAAGGACACGGGGAACGTGGAGGGGCTGCTGGTGTTGCTCGCCCCGGACGGTATGCTCAAGCTGCCGTCGTCTCCGCACGGGCTGGAGGGCTGCAGCCAGAGCATTGTGGAGCTGCAGAGGCAGGACTCGGGATGGATGTTCCAGAACCCCTCTCTGGGCCTGCTGGAGTACCGGGTGCTGGGCACCAACTTCAGAGACTACGCCATCATCTTCACCCAGCTGGAGTTCGGGGAGGAGGCCTTCAACACCGTGGAGTTGTACAGTTGGACAGAGATGGCCAGAGAGGAGGCCATGCGGGTCTTCAGCAAGTGGAGCAGTGGCCTGGGCTTCTGGTCCCAGCAGCAGGCCCAGCTACAGAGGGACTTCACCTGTGCACACAGGATCCTCCAGGTGAACCCTCCTTCTGCACCACCTTAG

Related Sequences

XP_004849638.1 Protein

Lcn6 PREDICTED: epididymal-specific lipocalin-6 [Heterocephalus glaber]

Length: 190 aa     
>XP_004849638.1
MGVAQLTPLLALMSTPRAQAVWLGRLDPCSRQLLGPWYVLAVASREKGFTLEKDTGNVEGLLVLLAPDGMLKLPSSPHGLEGCSQSIVELQRQDSGWMFQNPSLGLLEYRVLGTNFRDYAIIFTQLEFGEEAFNTVELYSWTEMAREEAMRVFSKWSSGLGFWSQQQAQLQRDFTCAHRILQVNPPSAPP