Details from NCBI annotation

Gene Symbol Ptbp3
Gene Name polypyrimidine tract binding protein 3, transcript variant X3
Entrez Gene ID 101713940

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTBP3 ENSCPOG00000011586 (Guinea pig)

Gene Details

polypyrimidine tract binding protein 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010423, Guinea pig)

Protein Percentage 98.05%
CDS Percentage 96.95%
Ka/Ks Ratio 0.09024 (Ka = 0.009, Ks = 0.1)

PTBP3 ENSG00000119314 (Human)

Gene Details

polypyrimidine tract binding protein 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000414921, Human)

Protein Percentage 94.83%
CDS Percentage 93.54%
Ka/Ks Ratio 0.13085 (Ka = 0.0271, Ks = 0.2071)

Ptbp3 ENSMUSG00000028382 (Mouse)

Gene Details

polypyrimidine tract binding protein 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099947, Mouse)

Protein Percentage 94.27%
CDS Percentage 90.08%
Ka/Ks Ratio 0.08263 (Ka = 0.0316, Ks = 0.3826)

Ptbp3 ENSRNOG00000016334 (Rat)

Gene Details

polypyrimidine tract binding protein 3 (Ptbp3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022107, Rat)

Protein Percentage 95.41%
CDS Percentage 91.27%
Ka/Ks Ratio 0.07271 (Ka = 0.0244, Ks = 0.3358)

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location: 22632240..22747156   Strand: +
>XM_004849569.1
ATGAAATATCGTCGGGGATTCGATGAGCTTCTTTCTTGTGGTGTCACTAACGGCTCTTCTACCATGAACAGTTCTAGTCCTTCGACAGGTGTATATGCTAATGGGAATGACAACAAGAAATTTAAAGGAGATAGACCTCCCTGTTCGCCTTCCCGTGTTCTCCATCTTCGAAAAATTCCATGTGATGTCACCGAAGCGGAGGTCATATCATTAGGTCTTCCGTTTGGCAAAGTAACTAATCTTTTGATGTTGAAAGGAAAAAGCCAGGCTTTCTTAGAAATGGCTTCTGAGGAAGCTGCTGTTACTATGGTAAATTATTATACTCCCGTTACTCCTCATCTTCGAAGCCAACCTGTTTATATTCAGTATTCCAATCACAGAGAACTTAAGACTGACAATCTGCCTAATCAAGCTAGAGCCCAAGCTGCACTGCAGGCTGTCAGTGCTGTCCAGTCAGGAAATCTGGCCCTTCATGGAGCTCCGTCAAATGAAGCCACAGTCCTACCTGGGCAGAGCCCTGTACTCCGAATAATTATTGAAAACCTCTTTTACCCTGTCACTCTGGAAGTTCTTCATCAGATATTTTCTAAATTTGGCACGGTCTTGAAGATTATCACCTTTACAAAGAATAATCAATTTCAAGCACTGCTTCAGTATGCTGACCCAGTGAATGCACATTATGCCAAAATGGCTCTGGATGGCCAGAATATCTATAATGCATGCTGTACTCTGCGTATTGACTTCTCCAAGCTCACCAGCCTTAATGTGAAATATAATAATGACAAAAGCAGAGACTTCACTCGCTTAGACCTTCCTTCTGGTGATGGCCAGCCATCTCTTGAACCCCCTATGGCTGCTGCTTTTGGTGCACCAGGTATAATATCTTCACCATACACAGGGGCTGCTGGATTTGCCCCAGCCATTGGATTTCCTCAAGCTACAGGTCTGTCAGTCCCAGCTGTTCCTGGAGCCCTTGGTCCGCTTACACTCACCTCCTCTGCTATCACTGGAAGAATGGCCATTCCTGGGGCGAGTGGTGTACCAGGAAATTCTGTTCTACTTGTCACCAATCTCAATCCTGATCTTATCACGCCACATGGACTTTTTATCCTGTTTGGAGTATATGGTGATGTACATCGAGTGAAGATAATGTTTAATAAAAAGGAAAATGCCTTGGTTCAGATGGCAGATGCACACCAAGCCCAGCTAGCAATGAACCATCTAAGTGGTCAGAGACTTTATGGAAAAGTGCTCCGTGCTACACTGTCCAAACACCAAACAGTTCAGCTTCCTCGAGAGGGACAAGAAGACCAAGGTCTGACTAAGGATTTCAGCAATAGTCCTTTGCATCGCTTTAAAAAGCCTGGCTCTAAAAACTTCCAGAATATTTTTCCACCATCAGCCACGCTGCATCTTTCCAACATTCCCCCTTCTGTTACAATGGATGATCTGAAGAACATTTTCACAGAGGCTGGATGTTCAGTGAAGGCTTTTAAATTCTTTCAGAAAGATCGCAAAATGGCACTCATTCAGTTAGGATCTGTGGAAGAAGCAATCCAGGCCCTCATTGAACTTCATAATCATGATCTTGGAGAAAATCACCACCTCAGAGTTTCCTTCTCAAAATCTACAATCTGA

Related Sequences

XP_004849626.1 Protein

Ptbp3 PREDICTED: polypyrimidine tract-binding protein 3-like isoform X3 [Heterocephalus glaber]

Length: 545 aa      View alignments
>XP_004849626.1
MKYRRGFDELLSCGVTNGSSTMNSSSPSTGVYANGNDNKKFKGDRPPCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMVNYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLALHGAPSNEATVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSLEPPMAAAFGAPGIISSPYTGAAGFAPAIGFPQATGLSVPAVPGALGPLTLTSSAITGRMAIPGASGVPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADAHQAQLAMNHLSGQRLYGKVLRATLSKHQTVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNIFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI