Details from NCBI annotation

Gene Symbol Tnc
Gene Name tenascin C, transcript variant X4
Entrez Gene ID 101718559

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNC ENSCPOG00000003429 (Guinea pig)

Gene Details

tenascin C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016110, Guinea pig)

Protein Percentage 91.46%
CDS Percentage 91.28%
Ka/Ks Ratio 0.15822 (Ka = 0.0433, Ks = 0.2738)

TNC ENSG00000041982 (Human)

Gene Details

tenascin C

External Links

Gene Match (Ensembl Protein ID: ENSP00000265131, Human)

Protein Percentage 89.05%
CDS Percentage 87.9%
Ka/Ks Ratio 0.1319 (Ka = 0.0579, Ks = 0.439)

Tnc ENSMUSG00000028364 (Mouse)

Gene Details

tenascin C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103000, Mouse)

Protein Percentage 87.07%
CDS Percentage 85.26%
Ka/Ks Ratio 0.11276 (Ka = 0.0686, Ks = 0.6086)

Tnc ENSRNOG00000049585 (Rat)

Gene Details

tenascin C (Tnc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066422, Rat)

Protein Percentage 85.03%
CDS Percentage 83.42%
Ka/Ks Ratio 0.12745 (Ka = 0.0849, Ks = 0.666)

Genome Location

Sequence Coding sequence

Length: 6606 bp    Location: 20044877..20137415   Strand: +
>XM_004849488.1
ATGGGGGCCTTGACTCGGCTGTTGCTGGGACTCTTCCTGGCTTTACTTGCCCTCTCTTCTGAAGGCGGGGTCCTCAAGAAAGTCATCAGGCACAAGCGACAGAGTGGGGTGAACATCACCTTGCCAGAGGAGAATCAGCCAGTGGTGTTTAACCATGTGTACAACATCAAGCTGCCCTTGGGCTCTCAGTGTTCTGTGGATCTGGAATCAACCAGTGGGGAGAAAGACCTGGCCCCTCCATCCGAGCCCAGTGAAAGCTTCCAGGAGCACACAGTGGATGGGGAAAATCAAATCGTCTTCACGCACCGCATCAACATCCCCCGCCAGGCCTGTGGCTGTGCTGCTGCTCCAGATGTCAAAGAGCTCCTGAGCAGGCTGGAGGAGCTGGAGCTCCTGGTGTCCTCCCTGCGGGAGCAGTGCACCATGGGAACAGGCTGCTGTCTCCAGCCTGCTGAAGGCCGCCTGGACACCAGGCCCTTCTGCAGTGGCCGAGGCAACTTCAGCACTGAAGGGTGTGGCTGCATTTGTGAACCCGGCTGGAAAGGCCCCAACTGCTCAGAGCCTGAGTGCCCCGGCAACTGTAACCTGCATGGTCAGTGCCTCGAGGGACAGTGCATCTGTGATGAAGGCTTCACGGGGGAGGACTGCAGCCAGCTGGCCTGCCCCAGTGACTGCAATGACCAGGGGAGGTGTGTGAACGGGGTCTGTGTCTGCTTTGAAGGCTACGCGGGGACTGACTGCAGCCAGGAGGTCTGTCCCGTGCCCTGCAGCGAGGAGCATGGCAGGTGTGTGGACGGCCAATGTGTGTGCCAGGAAGGCTTTGCAGGAGAGGACTGCAACGAGCCCCTCTGTCTCAACAACTGCTATAACCGTGGGCGCTGCGTGGAGAACGAGTGTGTGTGTGACGAGGGCTTCACAGGTGAGGACTGCAGTGAGCTCGTCTGTCCCAATGACTGCTTTGACCGGGGCCGCTGCCTCAACGGCACCTGCCACTGTGAAGAGGGCTTCACGGGCGAGGACTGCGGCACGCTCACCTGCCCCAACAACTGCCAGGGCCGGGGCCAGTGTGAGGAAGGCCAGTGCGTGTGCGACGAAGGCTTTGCGGGTGCCGACTGCAGCGAGAGGAGGTGTCCTGCCGACTGTCACAACCGAGGACGCTGCGTTCACGGGCAGTGCGAGTGTGATGACGGATTCACGGGAGCGGACTGTGGGGAGCTCAAGTGCCCCAGTGGATGCAGTGGCCACGGGCGCTGCGTCAACGGCCAGTGTGTGTGCGACGAAGGCTACACAGGGGAGGACTGTAGCTGGCAGCGGTGCCCCAGTGACTGCCACAGCAGGGGCCTCTGCATAGAGGGCAAGTGTGTGTGCGAGCCAGGCTTCAAGGGCTACGACTGCAGTGACATGAGCTGCCCCAACGACTGTCACCAGCATGGTCGCTGTGTGAACGGCATGTGTGTCTGTGATGACGGCTACACAGGGGAAGACTGCCGGGACCGCCGCTGTCCCCAAGACTGCAGCCAGCGGGGCCGCTGTGTGGACGGGCAGTGTGTGTGCGAAGACGGCTTCACCGGCCCCGACTGTGCGGAGTTGTCCTGTCCCAACGACTGCCACGGCCAGGGCCGCTGCGTGAACGGCCAGTGCGTGTGCCATGAGGGCTTCACCGGCAAAGACTGCAAAGAGCGAAGGTGTCCTGGTGACTGCCACGGCCAGGGCCGCTGTGTGGACGGCCAGTGTGTGTGCCACGAGGGCTTCACGGGCATGGACTGTGGGCAGCGCTCCTGTCCCAATGACTGCAGCAGCTCGGGACAGTGTGTTTCAGGTCGCTGCATCTGCCGTGAGGGCTCCACCGGGGATGACTGCTCAGAGGTGTCCCCTCCCAAAGACCTCATCGTGACAGAAGTGACAGAAGAGACCGTAAACCTGGCATGGAACAATGAGATGCGAGTCACAGAGTACCTCATTGTGTACACACCCACCCACGCCAATGGCCTGGAAATGCAGTTCCGGGTTCCTGGGGACCAGACATCCACTGTCATCCGGGAGCTGGAGCCTGGTGTGGAGTACTTTATCCGAGTGTTTGCCATCCTGGAGAACAAGAGGAGCATCCCTGTCAGTGCCAGGGTTGCCACCTACCTGCCAGCACCTGAAGGCCTAAAATTCAAGTCCATCAAGGAGACATCTGTGGAAGTGGAGTGGGACCCTCTAGACATTGCTTTTGAAACATGGGAGATCATCTTCCGGAATATGAACAAAGAAGATGAGGGAGAAATCACCAAAAGCCTGAGGAGGCCAGAGACCTCCTACCAGCAAACTGGTCTGGCCCCTGGGCAGGAATATGAGATATCTCTGCACATCGTGAAAAACAACACCCGGGGCCCAGGCCTGAAAAGGGTGACCACCACCCGCTTGGATGCCCCCAGCCAGATAGAGGTGAAAGATGTCACAGACACCACAGCACTCGTCACCTGGTTCAAACCCCTGGCTGAGATTGACGGCATGGAGCTCTCCTATGGCATCAAAGACGTGCCGGGTGACCGCACCACCATCGACCTCACCCACGATGAGAACCAGTACTCCATCGGGAACCTGAAGCCTGACACCCAGTACGAGGTGTCCCTCATCTCTCGCAGGGGCGACATGTCCAGCAACCCAGCCAAAGAAACCTTCACAACAGGCCTGGATGCACCTAGGAATCTCCGGCGCACCTCCCAGACCGACAGCAGCCTCACCTTGGAATGGAGAAACGTCAAGACAGCCATTGACAGCTACAGAATCAAGTATGCACCCATCTCTGGTGGCGACCATGCCGAAGTCGATGTTCCAAAGAGTCAACAAGCCACAACCAAAACCACACTCACAGGTCTGAGGCCAGGAACTGAGTATGGTATTGGAGTCTCTGCTGTGAAGGACGACAGGGAGAGTGATCCAGCGACTATCAACGCTGCAACAGAAATTGACGCACCCAAGGACCTTCAGGTTTCTGAAATCACAGAGAACAGCCTGACCCTGCTGTGGAAGACACCAGCAGCCAAGTTTGACCGATACCGCCTCAACTACAGCCTCCCCACAGGCCAGTCAGTGGAGGACCAGCTGCCCCGAGACACCACCTCCTATGTGCTACGAGGCCTGGAGCCCGGCCAGGAGTACACCGTCCTCCTCACGGCTGAGAAGGGCAGGCACAAGAGCAAGCCAGCCCTCGTGAAGGCTGCCACCGAACATGTCCCCGAACTGGAAAATCTCATCGTGACTAAGGTTGGCTGGAATGGCCTCAGACTCAACTGGACCGCTGCTGACCAGCCATATGAGCACTTTGTCATTCAGGTGCAGGAGGCCAACAAGGTGGAGGCCACTCACAACCTCACGGTGCCTGGCAGCCTCCGGGCTGTGGACCTTCCAGGTCTCAAGGCCGGCACCCCGTATACAGTCTCCATCTATGGGGTGATCGGGGGCTATAGAACGCCGGTGCTCTCTGCTGAGGCCTCCACAGGGGAAACTCCCAACTTGGGAGAGATCACGGTGGCCGAGGTGGGCTGGGATGCCCTCAAGCTCAACTGGACTGCTCCTGAAGGGGCCTTTGAGCACTTTCTCATTCAGGTGCAGGAGGCTGACACAGTAACAGCAGTCCAGAACCTCACAGTCCCAGGAAACCTGAGGTCCGTGGACCTGCCAGGGCTCAAAGCAGCCACTCACTATAGAGTCACCATCTGTGGGGTCTCTCGGGACTTCAGTACAACCCCTCTCTCTGCTGAAGTCTGGACAGAGGAGGTTCCAAGTCTGGGAAACCTCACAGTGACCGAAGTTAGCTCGGATGCCTTCAAATTGGACTGGACTGCACCAGATGGGACCTATGACCAGTTTGTCATTGAGGTCCAAGAGGCTGACCAGGTGGAAGGGGCTCACAATCTCACCATTCCTGGCAGCCTATGTTCCATGGAAATCCCAGGCCTCAGGGCTGGCACTGCTTACAGGATCACCCTGCATGGCGAGGTCAGGGGCCGCAGCACTCAACCCCTCGCTGTGGAGGTCATCACAGAGGAATTCCCCCAGCTGGAACACTTAGCTATGACTGAGGTTGGCTGGGATGGCCTCAAACTCAACTGGACCGCTGCTGACCAGCCATATGAGCACTTTGTCATTCAGGTGCAGGAGGCCAACAAGGTGGAGGCCACTCACAACCTCACGGTGCCTGGCAGCCTCCGGGCTGTGGACCTTCCAGGTCTCAAGGCCGGCACCCCGTATACAGTCTCCATCTATGGGGTGATCGGGGGCTATAGAACGCCGGTGCTCTCTGCTGAGGCCTCCACAGCCAAAGAACCTGAAATTGGAAACTTAAATGTTTCTGACATAACTCCCAAGAGCTTCAATCTCTCCTGGACAGCTGCTGATGGGATCTTCGAGACCTTTACCATTGAAATTATTGATTCCAATAGGTTGCTGCAGATGGTGGAATATAACATATCTGGTGCTGAACGAACTGCCCACATCTCAGGGCTCCCCCCTAGTACTGATTTCATTATCTACCTCTCTGGACTTGCTCCCAGCATCCGGACCAAAACCATCAGTGCCACAGCCACCACAGAGGCCTTGCCCCTTCTGGAAAATTTAACCATTTTCAACATTAATCCCTACGGGTTCACAGTTTCCTGGATGGCATCGGAGAATGCCTTTGACAGCTTTCTAGTAGCGGTGGTGGATTCTGGGAAGCTGCTGGACCCCCAGGAATTCACACTTTCAGGAACCCAGAGGAAGCTGGAGCTTAGAGGGCTCATAACTGGCATTGGCTATGAGGTTATGGTCTCTGGCTTCACCCAAGGGCACCAAACCAAGCCCTTGAGGGCTGAGATTATTACAGAAGCTGAACCGGAAGTTGACAACCTTCTGGTTTCAGATGCCACCCCAGACAGCTTCCGTCTGTCCTGGACAGCTGATGAAGGGATGTTCGACAGTTTTGTTCTCAAAATCAGAGATACCAAAAAGCAGTCTGAACCACAGGAAATAATCCTCCATTCCCCAGAACGTACCAAGGACATAACAAATCTCAGAGAGGCCACTGAATACAAAATTGAACTCTACGGAATACGCAATGGAAGGCGATCCCAGCCAGTCAGTGCCATAGCAACAACAGCCATGGGCTCTCCAAAGGAACTCATTTTCTCAGACATCACTGAGAATGCAGCCACTGTCAGCTGGAAGGCACCCACTTCGCAGGTGGAGAGCTTCCGGATTACCTATGTGCCCATGAGTGGAGGGACGCCCTCCATGGTGACAGTAGATGGAACCACAACGGAGGCCAGGCTGGGGCAGCTCATCCCCGGGATGGAGTACCTCGTCAGTGCCATTGCCATGAAGGGCTTTGAGGAGAGCGAACCTGTGTCAGGGTCTCTCACCACAGCTCTGGATGGCCCTTCCAGCCTGGTGACAGCTAACATCACGGACACTGAAGCCTTGGCCATGTGGCAGCCAGCCATAGCCACTGTGGATAGTTACATCATCTCCTACACAGGGGAGAGAGTGCCAGAAATTACACGCACAGTGTCCGGGAACACAGTGGAGTATGCTTTGACTGACCTTGAGCCTGCTACGGAATACACCCTGAGAATCTTTGCAGAGAAAGGACCCCTGAAGAGCTCCACCATCACTACCAGGTTCACTACAGACCTGGATTCTCCAAGAGATTTGACTGCTGCTGAGGTTCAATCAGAAACTGCCCTCCTCACCTGGCGACCTCCCCGGGCATCAGTCACTGGCTACCTCCTGGTTTATGAATCCCTGGATGGTACAGTCAAGGAAGTCATCCTGGGCCCAGACACCACCTCCTACAGCCTGGCAGACCTGAGTCCATCCACCCACTACACAGCCAGGATCCAGGCACTGAGTGGAGCCCTGAGGAGCAAGCTGATCCAAACCGTCTTCACCACAATTGGGCTCCTGTACCCATTCCCCAAGGATTGCTCCCAAGCAATGCTGAATGGAGACACGACCTCTGGCCTCTACACCATTTACCTGAACAATGATAAGGCCCAGGCTCTGGAAGTCTTCTGTGACATGACCGCTGATGGGGGTGGCTGGATTGTGTTCCTGAGACGCAAAAATGGGCGTGAGGACTTCTATCGAAACTGGAGAGCCTATGCTGCCGGATTTGGGGACCACAGAGAAGAATTCTGGCTTGGGCTGGATAACCTAAGCAAAATCACAGCCCAAGGACAATATGAGCTCCGTGTGGATCTGCAAGACCATGGGGAGACAGCCTACGCTGTTTACGACAAGTTCAGTGTGGGAGACGCCAAGACTAGATACAGGCTGAAGGTGGAAGGATACAGTGGGACCGCAGGTGACTCCATGGCCTACCACAATGGCAGATCTTTCTCCACCTATGACAAGGACACAGACTCAGCCATCACCAACTGTGCCCTGTCCTACAAAGGAGCTTTCTGGTATAAGAACTGTCACCGTGTCAACTTGATGGGGAGATATGGGGACAACAACCACAGTCAGGGAGTTAACTGGTTCCACTGGAAGGGCCACGAATACTCGATCCAGTTTGCAGAGATGAAGCTAAGACCCAGCAACTTCAGAAATCTAGAAAGCAGACGCAAACGGGCATAA

Related Sequences

XP_004849545.1 Protein

Tnc PREDICTED: tenascin isoform X4 [Heterocephalus glaber]

Length: 2201 aa      View alignments
>XP_004849545.1
MGALTRLLLGLFLALLALSSEGGVLKKVIRHKRQSGVNITLPEENQPVVFNHVYNIKLPLGSQCSVDLESTSGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRQACGCAAAPDVKELLSRLEELELLVSSLREQCTMGTGCCLQPAEGRLDTRPFCSGRGNFSTEGCGCICEPGWKGPNCSEPECPGNCNLHGQCLEGQCICDEGFTGEDCSQLACPSDCNDQGRCVNGVCVCFEGYAGTDCSQEVCPVPCSEEHGRCVDGQCVCQEGFAGEDCNEPLCLNNCYNRGRCVENECVCDEGFTGEDCSELVCPNDCFDRGRCLNGTCHCEEGFTGEDCGTLTCPNNCQGRGQCEEGQCVCDEGFAGADCSERRCPADCHNRGRCVHGQCECDDGFTGADCGELKCPSGCSGHGRCVNGQCVCDEGYTGEDCSWQRCPSDCHSRGLCIEGKCVCEPGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRRCPQDCSQRGRCVDGQCVCEDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFTGKDCKERRCPGDCHGQGRCVDGQCVCHEGFTGMDCGQRSCPNDCSSSGQCVSGRCICREGSTGDDCSEVSPPKDLIVTEVTEETVNLAWNNEMRVTEYLIVYTPTHANGLEMQFRVPGDQTSTVIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYQQTGLAPGQEYEISLHIVKNNTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALVTWFKPLAEIDGMELSYGIKDVPGDRTTIDLTHDENQYSIGNLKPDTQYEVSLISRRGDMSSNPAKETFTTGLDAPRNLRRTSQTDSSLTLEWRNVKTAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAVKDDRESDPATINAATEIDAPKDLQVSEITENSLTLLWKTPAAKFDRYRLNYSLPTGQSVEDQLPRDTTSYVLRGLEPGQEYTVLLTAEKGRHKSKPALVKAATEHVPELENLIVTKVGWNGLRLNWTAADQPYEHFVIQVQEANKVEATHNLTVPGSLRAVDLPGLKAGTPYTVSIYGVIGGYRTPVLSAEASTGETPNLGEITVAEVGWDALKLNWTAPEGAFEHFLIQVQEADTVTAVQNLTVPGNLRSVDLPGLKAATHYRVTICGVSRDFSTTPLSAEVWTEEVPSLGNLTVTEVSSDAFKLDWTAPDGTYDQFVIEVQEADQVEGAHNLTIPGSLCSMEIPGLRAGTAYRITLHGEVRGRSTQPLAVEVITEEFPQLEHLAMTEVGWDGLKLNWTAADQPYEHFVIQVQEANKVEATHNLTVPGSLRAVDLPGLKAGTPYTVSIYGVIGGYRTPVLSAEASTAKEPEIGNLNVSDITPKSFNLSWTAADGIFETFTIEIIDSNRLLQMVEYNISGAERTAHISGLPPSTDFIIYLSGLAPSIRTKTISATATTEALPLLENLTIFNINPYGFTVSWMASENAFDSFLVAVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKPLRAEIITEAEPEVDNLLVSDATPDSFRLSWTADEGMFDSFVLKIRDTKKQSEPQEIILHSPERTKDITNLREATEYKIELYGIRNGRRSQPVSAIATTAMGSPKELIFSDITENAATVSWKAPTSQVESFRITYVPMSGGTPSMVTVDGTTTEARLGQLIPGMEYLVSAIAMKGFEESEPVSGSLTTALDGPSSLVTANITDTEALAMWQPAIATVDSYIISYTGERVPEITRTVSGNTVEYALTDLEPATEYTLRIFAEKGPLKSSTITTRFTTDLDSPRDLTAAEVQSETALLTWRPPRASVTGYLLVYESLDGTVKEVILGPDTTSYSLADLSPSTHYTARIQALSGALRSKLIQTVFTTIGLLYPFPKDCSQAMLNGDTTSGLYTIYLNNDKAQALEVFCDMTADGGGWIVFLRRKNGREDFYRNWRAYAAGFGDHREEFWLGLDNLSKITAQGQYELRVDLQDHGETAYAVYDKFSVGDAKTRYRLKVEGYSGTAGDSMAYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLESRRKRA