Details from NCBI annotation

Gene Symbol Lhx6
Gene Name LIM homeobox 6, transcript variant X4
Entrez Gene ID 101701964

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LHX6 ENSCPOG00000010682 (Guinea pig)

Gene Details

LIM homeobox 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009585, Guinea pig)

Protein Percentage 94.33%
CDS Percentage 90.56%
Ka/Ks Ratio 0.10364 (Ka = 0.0426, Ks = 0.4107)

LHX6 ENSG00000106852 (Human)

Gene Details

LIM homeobox 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000377854, Human)

Protein Percentage 93.88%
CDS Percentage 89.72%
Ka/Ks Ratio 0.06326 (Ka = 0.0386, Ks = 0.6103)

Lhx6 ENSMUSG00000026890 (Mouse)

Gene Details

LIM homeobox protein 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108584, Mouse)

Protein Percentage 93.37%
CDS Percentage 87.8%
Ka/Ks Ratio 0.06067 (Ka = 0.0417, Ks = 0.6878)

Lhx6 ENSRNOG00000005996 (Rat)

Gene Details

LIM homeobox 6 (Lhx6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008817, Rat)

Protein Percentage 93.35%
CDS Percentage 87.68%
Ka/Ks Ratio 0.05555 (Ka = 0.0407, Ks = 0.7334)

Genome Location

Sequence Coding sequence

Length: 1134 bp    Location: 13066727..13090292   Strand: +
>XM_004849438.1
ATGTACTGGAAGCATGAGAACGCCGCCCCGGCGCTGCCCGAGGGCTGCCGGCTGCCGGCCGAAGGCGGCCCGGCCACCGACCAGGTGATGGCCCAGCCAGGGTCCGGCTGCAAAGCGACCACCCGCTGTCTCGAAGGGACCGCGCCGCCCACCATGGCACAGTCGGACGCCGAGGCCCTGGCAGGCTCTCTGGACAAGGATGAGGGCCGGGCCTCCCCATGTACGCCTAGCACACCATCTGTGTGCTCACCACCTTCTGCTGCCTCCTCCGTGCCGTCTGCCGGCAAGAACATCTGCTCCAGTTGTGGCCTTGAGATCCTGGACCGGTATCTGCTCAAGGTCAACAACCTCATCTGGCATGTGCGATGCCTTGAGTGCTCCGTGTGTCGGACATCACTGAGGCAGCAGAACAGCTGCTACATCAAGAACAAGGAAATCTTCTGCAAGATGGACTACTTCAGTCGATTTGGGACCAAGTGTGCCCGGTGCGGTCGGCAGATCTACGCCAGTGACTGGGTGCGGCGGGCACGCGGCAATGCCTATCACCTCGCCTGCTTTGCCTGCTTCTCGTGCAAGCGCCAGCTGTCCACCGGTGAAGAGTTTGGCTTGGTGGAGGAGAAGGTGCTGTGCCGCATCCACTACGACACCATGATCGAGAACCTCAAGAGAGCCGCTGAGAACGGGAACGGCCTCACTTTGGAGGGGGCAGTGCCCTCGGAACAGGACAGTCAGCCCAAGCCGGCCAAGCGCGCGCGGACGTCCTTCACAGCCGAGCAGTTGCAGGTTATGCAGGCGCAGTTCGCGCAGGACAACAACCCCGACGCACAGACGCTGCAGAAGCTGGCGGACATGACGGGCCTGAGCCGGAGGGTCATCCAGGTGTGGTTTCAAAACTGCCGGGCGCGTCATAAAAAGCACACACCGCAGCACCCAGTGCCGCCCTCAGGGGCGCCCCCGACCCGCCTCCCCTCCGCCTTGTCCGACGACATCCACTACTCCCCGTTCAGCAGCCCCGAGAGGGCGCGCATGGTCACCCTGCACGGCTACATTGAGAGTCATCCTTTTTCAGTACTAACGCTGCCGGCACTTGTGCATCTGCCCATGGGCACCCCACAGCTGCCCCTCAGCTGCTGA

Related Sequences

XP_004849495.1 Protein

Lhx6 PREDICTED: LIM/homeobox protein Lhx6 isoform X4 [Heterocephalus glaber]

Length: 377 aa      View alignments
>XP_004849495.1
MYWKHENAAPALPEGCRLPAEGGPATDQVMAQPGSGCKATTRCLEGTAPPTMAQSDAEALAGSLDKDEGRASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPTRLPSALSDDIHYSPFSSPERARMVTLHGYIESHPFSVLTLPALVHLPMGTPQLPLSC