Details from NCBI annotation

Gene Symbol Rabgap1
Gene Name RAB GTPase activating protein 1, transcript variant X2
Entrez Gene ID 101724658

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RABGAP1 ENSCPOG00000009811 (Guinea pig)

Gene Details

RAB GTPase activating protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008806, Guinea pig)

Protein Percentage 98.78%
CDS Percentage 94.73%
Ka/Ks Ratio 0.02555 (Ka = 0.0056, Ks = 0.218)

RABGAP1 ENSG00000011454 (Human)

Gene Details

RAB GTPase activating protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000362751, Human)

Protein Percentage 98.69%
CDS Percentage 93.55%
Ka/Ks Ratio 0.02174 (Ka = 0.006, Ks = 0.2771)

Rabgap1 ENSMUSG00000035437 (Mouse)

Gene Details

RAB GTPase activating protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061624, Mouse)

Protein Percentage 97.84%
CDS Percentage 90.91%
Ka/Ks Ratio 0.02448 (Ka = 0.0101, Ks = 0.4141)

Rabgap1 ENSRNOG00000009402 (Rat)

Gene Details

RAB GTPase activating protein 1 (Rabgap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013378, Rat)

Protein Percentage 97.18%
CDS Percentage 90.49%
Ka/Ks Ratio 0.03309 (Ka = 0.0138, Ks = 0.4176)

Genome Location

Sequence Coding sequence

Length: 3210 bp    Location: 11994133..11818414   Strand: -
>XM_004849414.1
ATGGATGACAAAGCTTCTGTTGGAAAAATCAGTGTCTCCTCAGACTCAGTATCTACTCTTAATAGTGAAGATTTTGTCTTGGTTTCCAGGCAAGGAGATGAAACACCATCTACAAATAATGGAAGTGATGATGAAAAAACAGGACTCAAGATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTGCTGATGGATCCTCCCATGGATGACCATCCAGGAGACAAGGAACTTGTGGAAAGGTCACAACTGGATGGCGAAGGAGATGGGCCTCTTTCTAATCAACTCTCAGCGTCATCCACCATTAACCCTGTGCCATTAGTGGGGCTCCAGAAACCAGAGATGAATCTGCCTGTGAAACCTGGACAAGGAGATTCAGAAGTGTCAAGTCCTTTCACACCTGTGGCTGATGAGGACAGTGTAGTCTTCAGTAAACTAACTTATTTAGGCTGTGCTTCAGTAAATGCTCCCAGGAGTGAAGTGGAAGCCTTAAGGATGATGTCCATCTTAAGAAGCCAGTGTCAGATTTCATTAGATGTAACCCTATCAGTGCCGAATGTATCTGAGGGAACTGTGAGGCTCTTAGATCCTCAGACAAACACTGAAATAGCAAACTACCCTATCTACAAAATCCTCTTTTGTGTCAGAGGGCATGATGGAACTCCTGAGAGCGACTGTTTTGCTTTTACTGAAAGTCATTACAATGCAGAGCTCTTCAGAATACATGTCTTTCGGTGTGAAATACAAGAAGCTGTTAGCCGGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTTCTGCCAAACAGACCCCACTTTCAGCCACTGCTGCACCGCAGACTCCTGACAGTGACATCTTTACCTTCTCTGTGTCTTTAGAAATAAAAGAAGATGATGGTAAAGGTTATTTTAGTGCTGTTCCGAAAGACAAAGACAGACAATGCTTTAAACTACGCCAAGGAATTGATAAGAAGATTGTCATTTATGTGCAACAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCTTAGCCCAGGAAAAGATGTACGAAATAGTGATATGCACTTGTTAGATTTGGAGTCTATGGGCAAAAGTTCAGATGGAAAGTCCTATGTTATTACTGGAAGCTGGAATCCAAAATCCCCGCATTTTCAAGTTGTAAATGAAGAAACTCCTAAAGATAAAGTGCTATTTATGACCACAGCTGTTGATTTGGTAATAACAGAGGTACAGGAGCCTGTTCGTTTCCTCCTAGAGACAAAAGTTCGAGTTTGCTCACCTAATGAAAGATTATTCTGGCCCTTCAGCAAACGTAGTACTACTGAAAATTTCTTTTTAAAACTGAAGCAGATAAAGCAGAAGGAGAGAAAGAACAATACGGACACTTTATATGAAGTTGTGTGCTTGGAAAGTGAATCAGAGAGAGAGCGGAGGAAAACTACAGCCAGTCCTTCAGTTCGCCTACCACAGTCTGGATCTCAGAGCTCAATGATACCTTCTCCTCCAGAAGATGATGAAGAGGAAGATAACGATGAACCTCTCTTGAGTGGCTCTGGCGATGTATCCAAAGAATGTGCAGAAAAAATTCTTGAAACGTGGGGAGAACTGCTGTCAAAATGGCATCTCAACTTGAGTGTGAGACCAAAGCAGTTGTTGTCCTTAGTAAGAAATGGTGTCCCTGAAGCTCTTAGAGGAGAAGTCTGGCAGCTGCTAGCAGGTTGTCACAACAATGACCACCTGGTGGAAAAGTACCGAATTCTCATCACAAAGGAGTCTCCCCAGGACAGTGCTATCACCAGGGATATTAACCGGACATTCCCAGCCCATGACTACTTCAAGGACACAGGAGGAGATGGACAAGATTCCTTATATAAAATATGCAAGGCTTATTCAGTGTATGATGAGGAAATTGGCTATTGCCAGGGCCAGTCATTTCTTGCTGCCGTGCTGCTTCTCCATATGCCTGAAGAACAGGCATTCAGTGTTCTGGTCAAGATCATGTTTGATTATGGTCTCAGGGAACTTTTCAAGCAAAACTTTGAAGATTTACACTGCAAATTTTACCAGTTGGAGCGCCTCATGCAGGAATACATTCCTGACCTGTATAACCACTTCCTGGATATCAGCCTTGAAGCACACATGTATGCCTCTCAGTGGTTTCTTACGCTTTTTACTGCAAAATTTCCTCTCTATATGGTCTTCCATATCATCGACCTGCTTTTAAGTGAGGGAATAAGTGTTATTTTTAATGTTGCGCTTGGATTATTAAAGACTTCCAAGGATGACCTGCTATTGACAGACTTTGAAGGTGCCTTGAAATTCTTCAGGGTTCAGCTTCCTAAGAGATACCGCTCAGAAGAAAATGCAAAAAAATTAATGGAGTTAGCTTGCAACATGAAGATTAGTCAGAAGAAGCTGAAAAAATATGAAAAAGAATATCACACCATGAGGGAACAGCAGGCCCAACAAGAAGACCCCATCGAGCGATTTGAGCGAGAAAATAGGCGTCTGCAAGAAGCTAACATGAGGTTGGAACAGGAAAACGATGATTTAGCTCATGAGCTGGTGACCAGCAAGATTGCATTGCGGAAGGACCTGGATAATGCTGAGGAAAAGGCAGATGCACTAAATAAGGAGCTGTTGATGACCAAACAGAAGTTGATTGATGCAGAAGAAGAGAAGAGACGGCTGGAAGAAGAGTCTGCGCAGCTGAAGGAAATGTGCCGCCGGGAACTTGACAAGGCAGAATCTGAGATTAAAAAAAACAGTTCTATCATCAGCGACTACAAGCAGATTTGTTCACAGTTGAGTGAAAGATTGGAGAAGCAGCAGACGGCTAATAAAGTAGAAATAGAGAAAATTCGGCAAAAAGTAGATGACTGTGAGCGCTGCCGGGAGTTTTTCAGCAAAGAAGGGCGTGTGAAGGGCATCAGCTCAGCCAAGGAGGTTTTGGATGAGGACACAGATGAAGAAAAGGAGACACTCAAGAACCAGCTAAGGGAGATGGAGCTGGAGCTGGCACAAACCAAGCTCCAGTTGGTGGAGGCTGAGTGCAAGATCCAGGACTTGGAGCACCACTTAGGCCTCGCCCTCAATGAAGTACAGGCAGCCAAGAAGACCTGGTTTAACCGAACGCTGAGCTCCATTAAGACGGCGACGGGGGTTCAGGGGAAAGAGACTTGCTGA

Related Sequences

XP_004849471.1 Protein

Rabgap1 PREDICTED: rab GTPase-activating protein 1 isoform X2 [Heterocephalus glaber]

Length: 1069 aa      View alignments
>XP_004849471.1
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQLQKELADVLMDPPMDDHPGDKELVERSQLDGEGDGPLSNQLSASSTINPVPLVGLQKPEMNLPVKPGQGDSEVSSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQISLDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATAAPQTPDSDIFTFSVSLEIKEDDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSPGKDVRNSDMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQVVNEETPKDKVLFMTTAVDLVITEVQEPVRFLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQKERKNNTDTLYEVVCLESESERERRKTTASPSVRLPQSGSQSSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETWGELLSKWHLNLSVRPKQLLSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLSEGISVIFNVALGLLKTSKDDLLLTDFEGALKFFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIKKNSSIISDYKQICSQLSERLEKQQTANKVEIEKIRQKVDDCERCREFFSKEGRVKGISSAKEVLDEDTDEEKETLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIKTATGVQGKETC