Details from NCBI annotation

Gene Symbol Lhx2
Gene Name LIM homeobox 2, transcript variant X2
Entrez Gene ID 101720657

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LHX2 ENSCPOG00000022927 (Guinea pig)

Gene Details

LIM homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017023, Guinea pig)

Protein Percentage 99.01%
CDS Percentage 95.14%
Ka/Ks Ratio 0.0189 (Ka = 0.0052, Ks = 0.2744)

LHX2 ENSG00000106689 (Human)

Gene Details

LIM homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000362717, Human)

Protein Percentage 99.01%
CDS Percentage 94.07%
Ka/Ks Ratio 0.01179 (Ka = 0.005, Ks = 0.424)

Lhx2 ENSMUSG00000000247 (Mouse)

Gene Details

LIM homeobox protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000253, Mouse)

Protein Percentage 98.27%
CDS Percentage 91.44%
Ka/Ks Ratio 0.01477 (Ka = 0.0083, Ks = 0.5631)

Lhx2 ENSRNOG00000010551 (Rat)

Gene Details

LIM homeobox 2 (Lhx2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014452, Rat)

Protein Percentage 92.79%
CDS Percentage 87.06%
Ka/Ks Ratio 0.06596 (Ka = 0.049, Ks = 0.7428)

Genome Location

Sequence Coding sequence

Length: 1218 bp    Location: 10970944..10951682   Strand: -
>XM_004849401.1
ATGCTGTTCCACAGTCTGTCGGGCCCCGAGGTGCACGGGGTCATCGACGAGATGGACCGCAGGGCCAAGAGCGAGGCTCCCGCCATCAGCTCCGCCATCGACCGCGGAGACACGGAGACGACCATGCCGTCCATCAGCAGTGACCGTGCAGCGCTGTGTGCCGGCTGCGGGGGCAAGATCTCCGACCGCTACTACCTGCTGGCTGTGGACAAGCAGTGGCACATGCGCTGCCTGAAGTGCTGCGAGTGCAAGCTCAACCTGGAGTCGGAGCTCACCTGCTTCAGCAAGGATGGCAGCATCTACTGCAAGGAAGACTACTACAGGCGGTTCTCTGTTCAGCGATGTGCCCGCTGCCACCTGGGCATCTCGGCCTCGGAGATGGTGATGCGTGCTCGGGACTTGGTTTATCACCTCAACTGCTTCACATGCACCACGTGTAACAAGATGCTGACCACGGGTGATCACTTCGGCATGAAGGACAGCCTGGTCTACTGCCGCTTGCACTTCGAGGCGCTGCTCCAGGGCGAGTACCCTGCGCACTTCAACCATGCCGACGTGGCAGCGGCAGCGGCTGCAGCCGCTGCAGCCAAGAGTGCGGGGCTGGGTGCAGCAGGGGCCAACCCGCTGGGGCTTCCCTACTATAATGGCGTGGGCACTGTGCAGAAGGGGCGGCCGAGGAAGCGCAAGAGCCCTGGCCCGGGGGCGGATCTGGCAGCCTACAATGCTGGTGACTGCAATGAGAACGACGCGGAGCACCTGGACCGCGACCAGCCCTACCCGAGCAGCCAGAAGACAAAGCGCATGCGCACCTCCTTCAAGCACCACCAGCTTCGGACCATGAAGTCTTACTTTGCCATTAACCACAACCCTGATGCTAAGGACTTGAAACAGCTTGCGCAAAAGACGGGCCTCACCAAGCGGGTCCTCCAGGTCTGGTTTCAGAACGCCCGGGCCAAGTTCAGGCGCAACCTCTTACGGCAGGAAAACACGGGTGTTGACAAGGCGACAGATGCAGCGCTGCAGACCGGGACGCCCTCGGGGCCGGCCTCGGAGCTCTCCAATGCCTCGCTCAGCCCCTCCAGCACACCCACCACCCTCACAGACTTGACGAGCCCTACCCTGCCAACTGTGACGTCCGTCTTAACTTCTGTGCCTGGCAACCTGGAGAGCCACGAGCCCCACAGCCCCTCACAAACGACTCTTACCAACCTTTTCTAA

Related Sequences

XP_004849458.1 Protein

Lhx2 PREDICTED: LIM/homeobox protein Lhx2 isoform X2 [Heterocephalus glaber]

Length: 405 aa      View alignments
>XP_004849458.1
MLFHSLSGPEVHGVIDEMDRRAKSEAPAISSAIDRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALLQGEYPAHFNHADVAAAAAAAAAAKSAGLGAAGANPLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAGDCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKATDAALQTGTPSGPASELSNASLSPSSTPTTLTDLTSPTLPTVTSVLTSVPGNLESHEPHSPSQTTLTNLF