Details from NCBI annotation

Gene Symbol Lmx1b
Gene Name LIM homeobox transcription factor 1, beta, transcript variant X2
Entrez Gene ID 101708650

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LMX1B ENSCPOG00000023429 (Guinea pig)

Gene Details

LIM homeobox transcription factor 1, beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015882, Guinea pig)

Protein Percentage 99.71%
CDS Percentage 94.94%
Ka/Ks Ratio 0.00231 (Ka = 0.0011, Ks = 0.4844)

LMX1B ENSG00000136944 (Human)

Gene Details

LIM homeobox transcription factor 1, beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000347684, Human)

Protein Percentage 99.49%
CDS Percentage 95.19%
Ka/Ks Ratio 0.00463 (Ka = 0.002, Ks = 0.4333)

Lmx1b ENSMUSG00000038765 (Mouse)

Gene Details

LIM homeobox transcription factor 1 beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043616, Mouse)

Protein Percentage 99.46%
CDS Percentage 92.83%
Ka/Ks Ratio 0.00324 (Ka = 0.0022, Ks = 0.6691)

Lmx1b ENSRNOG00000017019 (Rat)

Gene Details

Protein Lmx1b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022953, Rat)

Protein Percentage 98.95%
CDS Percentage 91.03%
Ka/Ks Ratio 0.00433 (Ka = 0.0042, Ks = 0.9779)

Genome Location

Sequence Coding sequence

Length: 1188 bp    Location: 8772147..8701204   Strand: -
>XM_004849365.1
ATGGATATAGCAACAGGTCCCGAGTCGCTGGAGAGGTGCTTCCCTCGAGGGCAGACGGACTGCGCCAAGATGTTGGATGGCATCAAGATGGAGGAGCACGCCCTGCGCCCCGGGCCCGCCACTCTGGGGGTGCTGCTGGGCTCCGACTGCCCGCATCCCGCCGTCTGCGAGGGCTGCCAGCGGCCCATCTCCGACCGCTTCCTGATGCGAGTCAACGAGTCGTCCTGGCACGAGGAGTGTTTGCAGTGCGCGGCATGTCAGCAAGCCCTCACCACCAGCTGCTACTTCCGGGATCGGAAACTGTACTGCAAACAAGACTACCAACAGCTCTTCGCAGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCACCCACCGAGTTCGTGATGCGCGCGCTGGAGTGCGTGTACCACCTGGGCTGCTTCTGCTGCTGTGTGTGCGAGCGGCAGCTGCGCAAAGGCGACGAGTTTGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGCGACTACGAGAAGGAGAAGGACTTGCTCAGCTCCGTGAGCCCCGATGAGTCCGACTCTGTGAAGAGTGAGGACGAGGATGGAGACACGAAGCCGACCAAGGGGCAGGGCAGCCAGAGCAAGGGCAGCGGTGACGACGGGAAGGACCCGCGGCGGCCCAAGCGGCCGAGGACCATCCTCACCACGCAGCAGCGGAGAGCCTTCAAGGCCTCCTTCGAGGTCTCCTCCAAGCCCTGCCGGAAGGTCCGAGAGACGCTGGCAGCCGAGACGGGCCTCAGCGTGCGTGTGGTCCAGGTCTGGTTTCAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGAGGCGGCACCAGCAGCAGCAAGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCCTCGTACACACCGCTGGCCCCGCCGCAGCAGCAGATCGTAGCCATGGAGCAGAGCCCCTATGGCAGCAGCGACCCCTTCCAGCAAGGCCTCACGCCGCCCCAAATGCCAGGGAACGACTCCATCTTCCACGACATCGACAGCGATACCTCCCTCACTAGCCTCAGCGACTGCTTCCTCGGCTCCTCGGATGTGGGCTCCCTGCAGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCTTGA

Related Sequences

XP_004849422.1 Protein

Lmx1b PREDICTED: LIM homeobox transcription factor 1-beta isoform X2 [Heterocephalus glaber]

Length: 395 aa      View alignments
>XP_004849422.1
MDIATGPESLERCFPRGQTDCAKMLDGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDTKPTKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGNDSIFHDIDSDTSLTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYFAS