Details from NCBI annotation

Gene Symbol Garnl3
Gene Name GTPase activating Rap/RanGAP domain-like 3, transcript variant X1
Entrez Gene ID 101699700

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GARNL3 ENSCPOG00000012318 (Guinea pig)

Gene Details

GTPase activating Rap/RanGAP domain-like 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011081, Guinea pig)

Protein Percentage 96.15%
CDS Percentage 94.03%
Ka/Ks Ratio 0.10522 (Ka = 0.0196, Ks = 0.1865)

GARNL3 ENSG00000136895 (Human)

Gene Details

GTPase activating Rap/RanGAP domain-like 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000362485, Human)

Protein Percentage 93.37%
CDS Percentage 89.68%
Ka/Ks Ratio 0.10956 (Ka = 0.0388, Ks = 0.3538)

Garnl3 ENSMUSG00000038860 (Mouse)

Gene Details

GTPase activating RANGAP domain-like 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099874, Mouse)

Protein Percentage 93.33%
CDS Percentage 89.06%
Ka/Ks Ratio 0.08081 (Ka = 0.0341, Ks = 0.4218)

Garnl3 ENSRNOG00000022237 (Rat)

Gene Details

GTPase activating RANGAP domain-like 3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029239, Rat)

Protein Percentage 86.09%
CDS Percentage 82.87%
Ka/Ks Ratio 0.16461 (Ka = 0.098, Ks = 0.5956)

Genome Location

Sequence Coding sequence

Length: 3237 bp    Location: 8234826..8069321   Strand: -
>XM_004849332.1
ATGGAGCCAGATCCCGGCGCGGCGGCCGCTGCGCTCCTGCGGCAGAAGAGGGCGGCGCTGCGGCGCAAGGGGTGCAGCTTCGAGAGCCCCAGCACAGCACTTCAGCCTCCAGGCCCACTGATGGATCCACTGACCAAGGGGTCCTGTGGGAGTCAGATGGCACAAACCCTTCTCTGGAAAGCAAAATCGTCTCTGTCCTTTGGCATCCAGCCCCTTCAGACGTGGCCAACGCAAGACCCTGAACTAGAGTCCCAGGTCAACCTCTCTGTCTCGGAAGACCTAGGCTGTAGACGTGGGGATTTCAGTAGGAAACATTATGGATCTGTGGAGCTGCTTATTTCCAGTGATGCTGATGGAGCCATCCAAAGGGCTGGAAGATTCAGAGTGGAAAACGGCTCTTCAGATGAGAATGTGACTGCTCTGCCAGGTACTTGGCGAAGAACAGATGTGCACTTAGAAAACCCAGAATACCACACCAGATGGTATTTCAAGTATTTTTTAGGACAAGTCCATCAGAACTACATTGGAAACGATGCAGAGAAGAGCCCCTTCTTCCTGTCTGTGACCCTTTCTGACCAGAACAACCAGCGTGTCCCTCAGTACCGTGCAATTCTGTGGCGGAAAACAGGGACACAGAAAATATGCCTTCCCTACAGTCCCACAAAAACGCTATCTGTGAAGTCCATTTTAAGTGCCATGAATCTGGACAAATTTGAGAAAGGTCCTAGGGAAATTTTTCATCCTGAGATACAAAAGGACTTGCTGGTTCTGGAAGAACAAGAGGGCTCTGTGAATTTCAAGTTTGGGGTTCTTTTTGCCAAAGATGGACAGCTCACTGATGATGAGATGTTCAGCAATGAAATTGGAAGCGAAGCTTTTCAAAAATTTTTAAATCTCCTGGGTGACGCAATCACCCTAAAGGGCTGGACCGGCTACCGCGGGGGTCTGGACACCAAAAATGACACCACAGGGATACATTCGGTTTATACTGTGTACCAAGGGCATGAGATCATGTTTCATGTTTCCACCATGTTGCCATATTCCAAAGAGAACAAGCAGCAGGTGGAAAGGAAGCGCCACATTGGAAATGATATTGTCACCATCGTGTTCCAGGAAGGAGAGGAATCTTCTCCTGCCTTTAAGCCTTCCATGATCCGCTCCCATTTTACACATATCTTTGCCTTAGTGAGATATGACCAACAAAACGACAATTACAGGCTGAAAATATTTTCAGAAGAAAGTGTACCACTCTTTGGCCCACCCTTGCCATCCCCACCGGTGTTTACAGACCACCAGGAGTTCAGGGACTTTTTGCTAGTGAAATTAATTAATGGTGAAAAAGCCACCTTGGAAACCCCAACCTTTGCCCAGAAACGCCGGCGTACTCTGGACATGCTGATTCGATCTTTATACCAGGATCTGATGCCAGATATGCATAAGAACATGCTCAATAGGCGGTCTTTTAGTGACGTCTTACCTGAATCACCCAAGTCAGCACGGAAGAAAGAGGAGGCTCGCCAAGCAGAGTTTGTCAGGATAGGGCAGGCACTGAAACTGAAGTCCATTGTGAGAGGGGATGCACCATCAAGCTTGGTAGCTTCAGGGATCTGTAAGAAAGAGCCTTGGGAGCCCCAGTGTTTCTGCAGTAATTTCCCTCACGAAGCCGTGTGTGCAGATCCCTGGGGCCAGGCCTTGCTGGTTTCCACTGATGCTGGCGTCTTGCTAGTGGATGATGACCTTCCAGCTGTGCCTGTGTTCGACAGAACTCTGCCTGTGAAGCAGATGCATGTGCTGGAGACCCTGGACCTCCTGGTGCTCAGAGCAGACAAAGGAAAAGACGCCCGCCTCTTTGTCTTCCGGCTGAGCGCCGTGCAGAAGGGCCTCGAGGGGAGGCAGGTGGGCAGGAGCAGGTCCGACTGCAGAGAAAACAAGCTGGAGAAGACAAAAGGATGCCACCTGTATGCTATTAACACCCACCATAGCAGAGAGCTGAGGATCGTGGTTGCAATTCGGAATAAATTGCTTCTGATCACCAGGAAGCACAAGCCAAGTGGAGTGACCAGCGTCTCTCTGTTATCTCCCCTGTCCGAGTTGCCTGTTGAAGAATTCCAGTACATCAGAGAGATCTGTCTGTCCGACTCTCCCGCCGTGATGACCTTAGTGGACGGCCCGACGGAAGAGAGTGACAACCTCATCTGTGTGGCTTACCGACACCAGTTTGACGTGGTGAATGAGAGCACAGGAGAGGCCTTCAGGCTGCACCATGTGGAGGCCAACAGGGTTAATTTCGTTGCAGCTATTGATGTGTACGAAGATGGGGAGGCCGGCCTGCTGCTGTGCTACAACTACAGTTGCATCTATAAAAAGGTTTGCCCATTTAATGGCGGCTCTTTTTTGGTTCAACCCTCCGCATCGGACTTCCAGTTCTGTTGGAACCAGGCTCCTTACGCGATTGTCTGCGCCTTCCCCTACCTGCTGGCCTTCACTCCCGACTCCATGGAGATCCGCCTTGTGGTGAACGGGAACCTGGTCCACACAGCGGTCGTGCCGCAGCTGCAGCTTGTGGCCTCCAGGTCGGACATCTACTTCACAGCCGCCGCTGCTGTGCAAGAGGTTTCATCCGGAGGCAGCTCCAAGGGGGCCAGCGCCCAGAGCTCTCCACAGACACCCCCGGGCCGGGAGACACCTGTGTTCCCTTCTTCCCTGGGGGAAGGTGAAATTCAGTCCAAAAATCTGTACAAGATTCCACTTAGAAACCTTGTCGGCAGAAGCATCGAGCGACCTCTGAAATCACCCTTAGTCTCCAAGGTCATCACCCCGCCCACTTCCATCGGCCTGGGCATCGCTGCCATTCCTGTCACTCATTCCTTATCCCTGTCTCGCATGGAGATTAAAGAAATAGCAAGCAGGACCCGCAGGGAACTGCTAGGCCTCTCGGATGAAGGCGGACCCAGGTCAGAAGGAGCAGCAAAGGTCAAATCAAAAGCCCGGACTCGGTTAGAAGGCCAAGCAGGCTCCAAGCCAGGGACAGTGAGATCAACCAGCAGTGACAGGATCCCATCGGGCTCCTTGGAAAGTCCTTCTGCAGCTGAGGCCAACCCTGAGGGCTGCTGCCATTCAGTGAGCTCCGACCAGGACCCTGCAGTGGACAGAGAGGGCAGCCCGGTCTCAGGCTCAGGCAGCAGCCTCTTTCAACTCATAGCTTCGTCAGATGAAGACATTATTGACTTGAAGTAA

Related Sequences

XP_004849389.1 Protein

Garnl3 PREDICTED: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1 [Heterocephalus glaber]

Length: 1078 aa      View alignments
>XP_004849389.1
MEPDPGAAAAALLRQKRAALRRKGCSFESPSTALQPPGPLMDPLTKGSCGSQMAQTLLWKAKSSLSFGIQPLQTWPTQDPELESQVNLSVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSDENVTALPGTWRRTDVHLENPEYHTRWYFKYFLGQVHQNYIGNDAEKSPFFLSVTLSDQNNQRVPQYRAILWRKTGTQKICLPYSPTKTLSVKSILSAMNLDKFEKGPREIFHPEIQKDLLVLEEQEGSVNFKFGVLFAKDGQLTDDEMFSNEIGSEAFQKFLNLLGDAITLKGWTGYRGGLDTKNDTTGIHSVYTVYQGHEIMFHVSTMLPYSKENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRYDQQNDNYRLKIFSEESVPLFGPPLPSPPVFTDHQEFRDFLLVKLINGEKATLETPTFAQKRRRTLDMLIRSLYQDLMPDMHKNMLNRRSFSDVLPESPKSARKKEEARQAEFVRIGQALKLKSIVRGDAPSSLVASGICKKEPWEPQCFCSNFPHEAVCADPWGQALLVSTDAGVLLVDDDLPAVPVFDRTLPVKQMHVLETLDLLVLRADKGKDARLFVFRLSAVQKGLEGRQVGRSRSDCRENKLEKTKGCHLYAINTHHSRELRIVVAIRNKLLLITRKHKPSGVTSVSLLSPLSELPVEEFQYIREICLSDSPAVMTLVDGPTEESDNLICVAYRHQFDVVNESTGEAFRLHHVEANRVNFVAAIDVYEDGEAGLLLCYNYSCIYKKVCPFNGGSFLVQPSASDFQFCWNQAPYAIVCAFPYLLAFTPDSMEIRLVVNGNLVHTAVVPQLQLVASRSDIYFTAAAAVQEVSSGGSSKGASAQSSPQTPPGRETPVFPSSLGEGEIQSKNLYKIPLRNLVGRSIERPLKSPLVSKVITPPTSIGLGIAAIPVTHSLSLSRMEIKEIASRTRRELLGLSDEGGPRSEGAAKVKSKARTRLEGQAGSKPGTVRSTSSDRIPSGSLESPSAAEANPEGCCHSVSSDQDPAVDREGSPVSGSGSSLFQLIASSDEDIIDLK