Details from NCBI annotation

Gene Symbol Lrsam1
Gene Name leucine rich repeat and sterile alpha motif containing 1, transcript variant X6
Entrez Gene ID 101697853

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRSAM1 ENSCPOG00000013773 (Guinea pig)

Gene Details

leucine rich repeat and sterile alpha motif containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012409, Guinea pig)

Protein Percentage 89.74%
CDS Percentage 90.11%
Ka/Ks Ratio 0.12356 (Ka = 0.0526, Ks = 0.426)

LRSAM1 ENSG00000148356 (Human)

Gene Details

leucine rich repeat and sterile alpha motif containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000322937, Human)

Protein Percentage 85.02%
CDS Percentage 85.71%
Ka/Ks Ratio 0.11366 (Ka = 0.0779, Ks = 0.6856)

Lrsam1 ENSMUSG00000026792 (Mouse)

Gene Details

leucine rich repeat and sterile alpha motif containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108825, Mouse)

Protein Percentage 85.16%
CDS Percentage 85.02%
Ka/Ks Ratio 0.09256 (Ka = 0.0764, Ks = 0.8253)

Lrsam1 ENSRNOG00000022312 (Rat)

Gene Details

leucine rich repeat and sterile alpha motif containing 1 (Lrsam1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056931, Rat)

Protein Percentage 82.52%
CDS Percentage 82.76%
Ka/Ks Ratio 0.10492 (Ka = 0.0997, Ks = 0.9503)

Genome Location

Sequence Coding sequence

Length: 2169 bp    Location: 8031168..7997805   Strand: -
>XM_004849330.1
ATGCCTCTTTTCTTCCGGAAGCGGAAACCCAGTGAAGAGGCTCGGAAACGCCTGGAGTACCAGATGTGTCTGGCAAAAGAAGCAGGAGCAGATGACATTCTTGATATCTCTAAATGTGAGCTCACAGAGATTCCATTTGGGGCTTTTGCAACATGCAAAGTTCTCCAGAAGAAGGTGTTGATTGTGCATACAAACCAGCTCACCTCCCTGCTGCCCAAATCCTGCAGCCTCCTGAGCCTGGCAACCATCAAGGTCCTGGATCTGCACGACAATCAGCTGACAGCCCTCCCTGACAGCTTGGGGCAGCTGACCGCCCTGCAGGTGTTGAATGTGGAAAGAAATCTACTGACACATCTCCCCAACTCCACTGGGAACCTGGCCCAGCTCCAGACCCTCAACGTGAAAGACAACAGGCTGAAGGAGCTGCCCGACACCCTGGGGGAGCTCCGAAGCCTGCGCACCCTCGACATCAGCGAGAATGGGGTTCAGAGGCTGCCGCAGATGCTGGCTCACGTCCGGACGCTGGAGACGCTGAGCCTCGACACCTCGGCCATGCTCTTCCCGCCGCAGGAGGTGTGTGCCGCCGGCACTGCGGCCATTCAGCAGTTCCTCTGCAGAGAGTCTGGGCTGGAATATTACCCCCCTTCGCAGTACCTGCTGCCAGTTCTGGAGCAAGATGGAGCTGACAGTGCCCGGGACGGGCCTGATGGACCTGCAGACAGGTTCTCGAGGGAGGAGGCCCAGTGGCAGAACAGCTTCTCTGACTTCGAGAAGAGGAAGGAGCAGAAGATGCTGGAGAAACTGGAGTTTGAGCGGCGCCTGGAGCTGGGGCAGCGAGAGCATGCTCAGCTGCTGCGGCAGAGCCACAGCCAGAAGGACGAGGTCCTGCAGACGCTGCGGGAGGAGCGGTCTCGACTAGAGCAGGGGCTGAGCGCGCACCAGCGCTACCTGGACACCGAGCGGCAGCGGCTGCAGGAGCAGCTGAAGGAGACAGAGCAGAGCGTCGCCAGCCGGATCCAGAAGCTGCTGCAGGAGAACCGAAGGCAGAAACAAAGTTCTGAGATTCTGAAGTCATTGGAAAATGAACGAATAAGAATGGAACAGTTGATGGCCATAACCCAGGAGGAAACGGAGAACCTGCGTCGCAGGGAGATCGCCTCCGCCATGCAGCAGATGCTGACCGAGAGCTGCAACAGCCGGCTCGTCCAGATGGCCCACGAGGCGCAGCGGCAGAGCCTGGTCCAGCAGGCCTGTTCCAGCATGGCTGAGATGGACGAGAGGTTCCAGCAGATCCTGTCCTGGCAGCAGATGGACCAGAGCAAAGCCATCAGCCAGATCCTGCAGGAGAGCTCGATGCAGAAGGCAGCCTTCGAGGCCCTCCAGGTGAAGAAAGACCGGATGCATCGGCAGATCAGGAACCAGATTAGGTTAATAGAAACTGAGTTATTGCAGCTGACACAGCTGGAGTTAAAGAGGAAGTCCCTGGACACTGAGGCGCTGCAGGAGGTGATCGCTGAGCAGCGCTGGGTGCTCAGCGTCCTGCTCCAGCAGCTGCTCAAAGAGAAGAAGCAGCGGGAGGAGGAACTTCGGGAACTCCTGACGGAGTTGGAAGCCAAAAGTGAGACCAAGCAGGAAAACTACTGGCTCATTCAGTATCAGCGGCTCTTGGACCAGAAGCCATTGTCCTTGAGGCTGCAGGAAGAGGGCATGGAGCGCCAGCTGGTGGCCCTGCTGGTGGAGCTGTCAGCCGAGCACTACTTGCCTGTCTTCGCCCACCACCGCATCTCACTGGGGATGCTGAGCCAGATGAGCCCCAGGGACCTGGCCAAGGTGGGCGTCTCGGAGGCTGGTCTGCAGCACGAGATCCTCAGGAGAGCCCGGGAGCTGCAGGACGAGGCCAGGGCCCAGCCAGAGCTGAAACCACCCAAGGGGGAGGTCCTCGAGGCCCTGGAGCCACCCACAGTGCCCGTGAGGCCGTCTGCGCCCCCCGAGGAGGACCGAGAGCTGCCCGTCTCGGAGTGCGTCGTGTGCCTGGAGCGGGAGGCCCAGACCGTCTTCCTCCCCTGTGGCCACGTCTGCTGCTGCCAGCAGTGCTGCCAGCCCCTGCGCACCTGCCCACTGTGCCGCCAGGACATCGAGCAGAGCCTCCGGATCTACCACAGCAGCTGA

Related Sequences

XP_004849387.1 Protein

Lrsam1 PREDICTED: E3 ubiquitin-protein ligase LRSAM1 isoform X6 [Heterocephalus glaber]

Length: 722 aa      View alignments
>XP_004849387.1
MPLFFRKRKPSEEARKRLEYQMCLAKEAGADDILDISKCELTEIPFGAFATCKVLQKKVLIVHTNQLTSLLPKSCSLLSLATIKVLDLHDNQLTALPDSLGQLTALQVLNVERNLLTHLPNSTGNLAQLQTLNVKDNRLKELPDTLGELRSLRTLDISENGVQRLPQMLAHVRTLETLSLDTSAMLFPPQEVCAAGTAAIQQFLCRESGLEYYPPSQYLLPVLEQDGADSARDGPDGPADRFSREEAQWQNSFSDFEKRKEQKMLEKLEFERRLELGQREHAQLLRQSHSQKDEVLQTLREERSRLEQGLSAHQRYLDTERQRLQEQLKETEQSVASRIQKLLQENRRQKQSSEILKSLENERIRMEQLMAITQEETENLRRREIASAMQQMLTESCNSRLVQMAHEAQRQSLVQQACSSMAEMDERFQQILSWQQMDQSKAISQILQESSMQKAAFEALQVKKDRMHRQIRNQIRLIETELLQLTQLELKRKSLDTEALQEVIAEQRWVLSVLLQQLLKEKKQREEELRELLTELEAKSETKQENYWLIQYQRLLDQKPLSLRLQEEGMERQLVALLVELSAEHYLPVFAHHRISLGMLSQMSPRDLAKVGVSEAGLQHEILRRARELQDEARAQPELKPPKGEVLEALEPPTVPVRPSAPPEEDRELPVSECVVCLEREAQTVFLPCGHVCCCQQCCQPLRTCPLCRQDIEQSLRIYHSS