Sequence details NCBI ID: XM_004849309.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sh2d3c
Gene Name SH2 domain containing 3C, transcript variant X1
Entrez Gene ID 101723231

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SH2D3C ENSCPOG00000009069 (Guinea pig)

Gene Details

SH2 domain containing 3C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008144, Guinea pig)

Protein Percentage 90.45%
CDS Percentage 90.1%
Ka/Ks Ratio 0.09336 (Ka = 0.0453, Ks = 0.4848)

SH2D3C ENSG00000095370 (Human)

Gene Details

SH2 domain containing 3C

External Links

Gene Match (Ensembl Protein ID: ENSP00000317817, Human)

Protein Percentage 88.18%
CDS Percentage 87.04%
Ka/Ks Ratio 0.0912 (Ka = 0.0609, Ks = 0.6681)

Sh2d3c ENSMUSG00000059013 (Mouse)

Gene Details

SH2 domain containing 3C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073866, Mouse)

Protein Percentage 84.5%
CDS Percentage 83.12%
Ka/Ks Ratio 0.09122 (Ka = 0.0847, Ks = 0.9286)

Sh2d3c ENSRNOG00000022552 (Rat)

Gene Details

SH2 domain containing 3C (Sh2d3c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037663, Rat)

Protein Percentage 84.36%
CDS Percentage 83.14%
Ka/Ks Ratio 0.09786 (Ka = 0.085, Ks = 0.868)

Genome Location

Sequence Coding sequence

Length: 2547 bp    Location: 7771670..7800462   Strand: +
Raw sequence   
>XM_004849309.1
ATGACGGAGGGGCCCAAGAAGTCCAGCAAAAAGTTCAAGCTCTTCAAGTTCAAGGGCCTTGGGAGTCTCTCCAACCTTCCCCGGTCCTTCACTCTGAGACGATCTTCGGCCCCCATCAGTATCCGGCCCCCTCTGGAGCCTGACACCTTCGAAGCCACACAGGATGACATGGTGACAATTCCCAAGAGCCCTTCAGCCTATGCCCGCTCCAGTGACATGTATAGCCACATGGGCACCATGCCTAGGCCCAACCTCAAGAAGGCTCGGGACAAAAAGGCCACCCAGAAGGCCCAGGAGGTGGCCCCTCGAGGTCTGCCTGACCCACCCGGCTTGGAGGCAGCCAGGGATGTGGTGGAGGCTGGTGGCCTCCTGGAGGACATGCCGGCAGGGGGACCCGGCCCTTCGGACCCTATGAGAAAGCCTGAGGACCCTACAGCAGGCACCGAGCTGGGCAGAGTTCCCCGGGATGCGTGCTCAGAAGGGGCCTCGGGAGAGCTGGAGGCCAGCGGGGACTACGTGCAGTTCTCCAAGGAGAAGTACATCCTGGACTCCTCTCCAGAGAAACTGCATAAGGAGCTGGAGGAAGAGCTGAAACTCAGCAGCACGGACCTCCGAAGCCATGCCTGGTACCATGGCCGAATCCCCCGAGAGGTCTCAGAGACCCTGGTGCAGCGCAATGGTGACTTTCTCATCCGGGACTCGCTCACCAGCCTGGGTGACTATGTGCTCACGTGCCGCTGGCGCAACCAGGCCCTGCACTTCAAGATCAACAAGGTGGTGGTGAAGGCGGGCGAGAGCTACACCCACATCCAGTACCTGTTCGAGCAGGAGAGCTTCGACCACGTGCCCGCCCTGGTGCGCTACCACGTGGGCAGCCGCAAAGCCGTGTCAGAGCAGAGCGGTGCCATCATCTACTGCCCGGTCAACCGCACCTTCCCGCTGCGCTACCTCGAAGCCAGCTACGGCCTGGGCCCGGCCGGTGGTAAGGCCGCCAGCCCCACAGGGACCAAGGGCAGCCACATGAAGCGGCGCAGCGTCACCATGACAGATGGGCTCACCGCTGACAAGGTCACTCTCGGCGATGGCTGCCCCACCAGCGCATCCCTGCCCCACTCCCGGGACTCCATCCGCAACTGCGCCCTCAGTATGGACCAGATCCCGGACCTGCACTCGCCCCTCTCCCCCATCTCCGAGAGCCCCAGCTCCCCCGCCTACAGCACAGTCACCCGTGTCCACGCCACCCCTACAGCCCCCTCCGCCGATGGGCTCCCCGCCTCTCCCTCTCCCGTCGCCCGCCGCTCCAGTGAGCCCCAGCTGTGTCCCGGAAGTGCCCCAAAGCCCCTCCGGGAGTCGGACAAGGCCCCTCACGCCAGCCCCAATCACAGTCTCGGCAAGGCCTCCCCGTCTCCGTCACTCAGCAGCTACAGCGACCAGGACTCTGGCCACTACTGCCAGCTGCAGCCTCCCGCGCGCACCAGCCTGGAGTGGGCCGCGGTGGAACCCTCTAGCCGCCAAGCTCGGAGCTACGGGGAGAGGCTGAAGGAACTGTCGGAAGGCGGGGGCCCCGAAGGGGACAGGGGCAAGGGCTTCACTGCGCCCGTCATGGAAGCCACCTCCTCCTTCAACCCCACCACCTTCCAGTCGCTGCTGATCCCCAAGGAGAACCGGCCACTGGAGGTGAGCCTGCTGCGCAAGGTGAAGGAGCTGCTGGCCGAGGTGGACGCCCACACGCTGGCCCGGCACGTCACTAAGGTCGACTGCCTGGTTGCTAGGATACTGGGCGTTACCAAGGAGATGCAGACCCTAATGGGAGTCCGCTGGGGCATGGAGCTGCTCACCCTCCCCCATGGCCGGCAGCTCCGACTAGACCTGCTGGAGAGGTTCCATACCATGTCCATTATGCTGGCAGTGGATATCCTAGGCTGCACCGGCTCTGCGGAGGAGCGCGCGGCGCTGCTACACAAGACCATCCAGCTGGCCGCCGAGCTGCGGGGGACCATGGGCAACATGTTCAGCTTTGCCGCCGTCATGGGCGCCCTGGATATGGCCCAGATTTCCCGGCTGGAGCAAACGTGGATGACCCTGCGGCAGCGACACACAGAGGGTGCCATCCTGTATGAGAAGAAGCTCAAGCCTTTTCTCAAGAGCCTCAACGAGGGCAAAGAAGGCCCGCCGCTGAGCAACACCACGTTTCCGCACGTGCTGCCGCTCATCACGCTGCTGGAGTGCGACGCGGTGCCCACCGAGGGCCCGGAGCCCTGGGGCAGCACGGAGCACGGCGTGGAGGTGGTGCTGGCGCACCTGGAGGCGGCCCGCACGGTGGCGCACCACGGGGGCCTCTACCACACCAACGCGGAGGTCAAGCTGCAGGGGTTCCAGGCCCACCCAGAGCTCCTGGAGGTGTTCAGCACAGAGTTCCAGATGCGCCTCCTCTGGGGCAGCCAGGGCGCCAGCAGCAGCCAGGCCCGGCGCTACGAGAAGTTCGACAAGGTCCTCACCGCCCTGTCCCACAAAGTAGAGCCAGCCGTGCGCTCCAGCGAACTGTGA

Related Sequences

XP_004849366.1 Protein

Sh2d3c PREDICTED: SH2 domain-containing protein 3C isoform X1 [Heterocephalus glaber]

Length: 848 aa      View alignments
>XP_004849366.1
MTEGPKKSSKKFKLFKFKGLGSLSNLPRSFTLRRSSAPISIRPPLEPDTFEATQDDMVTIPKSPSAYARSSDMYSHMGTMPRPNLKKARDKKATQKAQEVAPRGLPDPPGLEAARDVVEAGGLLEDMPAGGPGPSDPMRKPEDPTAGTELGRVPRDACSEGASGELEASGDYVQFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHAWYHGRIPREVSETLVQRNGDFLIRDSLTSLGDYVLTCRWRNQALHFKINKVVVKAGESYTHIQYLFEQESFDHVPALVRYHVGSRKAVSEQSGAIIYCPVNRTFPLRYLEASYGLGPAGGKAASPTGTKGSHMKRRSVTMTDGLTADKVTLGDGCPTSASLPHSRDSIRNCALSMDQIPDLHSPLSPISESPSSPAYSTVTRVHATPTAPSADGLPASPSPVARRSSEPQLCPGSAPKPLRESDKAPHASPNHSLGKASPSPSLSSYSDQDSGHYCQLQPPARTSLEWAAVEPSSRQARSYGERLKELSEGGGPEGDRGKGFTAPVMEATSSFNPTTFQSLLIPKENRPLEVSLLRKVKELLAEVDAHTLARHVTKVDCLVARILGVTKEMQTLMGVRWGMELLTLPHGRQLRLDLLERFHTMSIMLAVDILGCTGSAEERAALLHKTIQLAAELRGTMGNMFSFAAVMGALDMAQISRLEQTWMTLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLSNTTFPHVLPLITLLECDAVPTEGPEPWGSTEHGVEVVLAHLEAARTVAHHGGLYHTNAEVKLQGFQAHPELLEVFSTEFQMRLLWGSQGASSSQARRYEKFDKVLTALSHKVEPAVRSSEL