Sequence details NCBI ID: XM_004849287.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol St6galnac4
Gene Name ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4, transcript variant X2
Entrez Gene ID 101717187

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ST6GALNAC4 ENSCPOG00000025762 (Guinea pig)

Gene Details

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015804, Guinea pig)

Protein Percentage 93.71%
CDS Percentage 90.51%
Ka/Ks Ratio 0.04168 (Ka = 0.0288, Ks = 0.6921)

ST6GALNAC4 ENSG00000136840 (Human)

Gene Details

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000336733, Human)

Protein Percentage 88.74%
CDS Percentage 88.52%
Ka/Ks Ratio 0.06294 (Ka = 0.0496, Ks = 0.7879)

St6galnac4 ENSMUSG00000079442 (Mouse)

Gene Details

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099882, Mouse)

Protein Percentage 86.42%
CDS Percentage 84.22%
Ka/Ks Ratio 0.05698 (Ka = 0.0671, Ks = 1.1779)

St6galnac4 ENSRNOG00000048870 (Rat)

Gene Details

Protein siat7D

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064130, Rat)

Protein Percentage 87.09%
CDS Percentage 84.55%
Ka/Ks Ratio 0.05498 (Ka = 0.064, Ks = 1.1642)

Genome Location

Sequence Coding sequence

Length: 909 bp    Location: 7652955..7660855   Strand: +
Raw sequence   
>XM_004849287.1
ATGAAGGCTCAGGGTCGCCTCCTGCTCCTTGTCCTGTGCTCCTTGGTCGTCTCTGCCATCTACATCCTCCTCTGCTGCTTGTCCTGCCTGCCCCCATGCCGGGCCACCTGCCTGGACCACCACCTCCCTGTGGACTCCAGCCCCACCGCGCCGGGGCCCCTGCACTTCAGGGGGTACAGCAGTGTGCCTGATGGGAAGCCGCTGGTCCGAGAGCCGTGCCACAGCTGTGCCGTGGTGTCCAGCTCCGGCCAGATGCTGGGCTCCGGCCTGGGTGCCCAGATCGATGGTGCCGAGTGCGTCCTTCGCATGAACCAGGCACCCACCATGGGCTTCGAGGCGGATGTGGGCCGGCGCAGCACCCTGCGTGTGATCTCGCACACCAGTGTCCCGCTGCTGCTGCGTAACTACTCGCACTACTTCCAGCAGGCCCGAGACACGCTGTACATGGTGTGGGGCCAGGGCAGGCACATGGACCGTTCACTGGGTGGCCGTACCTACCGCACGCTGCTGCACCTCACACAGATGTACCCGGGGCTGCAGGTCTACACCTTCACTGAGCGCATGATGGCCCACTGCGACCAGATCTTCCAGGACGAGACCGGCAAGAACCGGAGGCAGTCCGGGGCATTTCTCAGCACCGGCTGGTTCACCATGATCCTGGCCCTGGAGCTGTGTGAGGAGATCGTGGTCTATGGGATGGTCAGCGACAGCTACTGCAGGGAGCGGAGCCACCCCTCAGTGCCTTACCACTACTTCGAGAAGGGCCGGTTGGACGAGTGCCAGATGTACCTGGCCCATGAGCGGGCGCCTCGGAGTGCCCATCGCTTCATCACAGAGAAGGCCGTGTTCTCGCGCTGGGCCAAGAAGAGGCCAATCGTGTTCGCCCACCCATCCTGGAGGGCCGAGTAG

Related Sequences

XP_004849344.1 Protein

St6galnac4 PREDICTED: alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2 [Heterocephalus glaber]

Length: 302 aa      View alignments
>XP_004849344.1
MKAQGRLLLLVLCSLVVSAIYILLCCLSCLPPCRATCLDHHLPVDSSPTAPGPLHFRGYSSVPDGKPLVREPCHSCAVVSSSGQMLGSGLGAQIDGAECVLRMNQAPTMGFEADVGRRSTLRVISHTSVPLLLRNYSHYFQQARDTLYMVWGQGRHMDRSLGGRTYRTLLHLTQMYPGLQVYTFTERMMAHCDQIFQDETGKNRRQSGAFLSTGWFTMILALELCEEIVVYGMVSDSYCRERSHPSVPYHYFEKGRLDECQMYLAHERAPRSAHRFITEKAVFSRWAKKRPIVFAHPSWRAE