Details from NCBI annotation

Gene Symbol Prdm12
Gene Name PR domain containing 12, transcript variant X1
Entrez Gene ID 101725660

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRDM12 ENSCPOG00000005901 (Guinea pig)

Gene Details

PR domain containing 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005323, Guinea pig)

Protein Percentage 89.89%
CDS Percentage 88.16%
Ka/Ks Ratio 0.07032 (Ka = 0.0564, Ks = 0.8015)

PRDM12 ENSG00000130711 (Human)

Gene Details

PR domain containing 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000253008, Human)

Protein Percentage 96.46%
CDS Percentage 92.92%
Ka/Ks Ratio 0.01676 (Ka = 0.0127, Ks = 0.7571)

Prdm12 ENSMUSG00000079466 (Mouse)

Gene Details

PR domain containing 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109098, Mouse)

Protein Percentage 97.26%
CDS Percentage 91.05%
Ka/Ks Ratio 0.01377 (Ka = 0.0122, Ks = 0.8825)

Prdm12 ENSRNOG00000009218 (Rat)

Gene Details

Protein Prdm12

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012234, Rat)

Protein Percentage 97.26%
CDS Percentage 90.14%
Ka/Ks Ratio 0.01157 (Ka = 0.0122, Ks = 1.0564)

Genome Location

Sequence Coding sequence

Length: 1104 bp    Location: 5063161..5049595   Strand: -
>XM_004849106.1
ATGATGGGCTCCGTGCTCCCGGCTGAGGCCCTGGTGCTCAAGACAGGGCTGAAAGCGCCGGGGCTGGCGTTGGCCGAGGTCATCACCTCCGACATCCTGCACAGCTTTCTGTACGGCCGATGGCGCAACGCGCTGGGCGAGCAGCTCCTGGAAGACAGGAGTCACCACGCCAGCCCCAAGACGGCCTTTACCGCCGAGGTGCTGGCGCAGTCCTTCTCGGGCGAGGTGCAGAAACTGTCCAGCCTGGTGCTGCCTGTGGAGGTGATCATCGCCCAGAGCTCCATCCCTGGCGAGGGCCTTGGCATCTTCTCCAAAACGTGGATCAAGGCAGGCACCGAGATGGGCCCCTTCACTGGCCGTGTCATCGCCCCCGAGCATGTGGACATCTGCAAGAACAACAACTTGATGTGGGAGGTGTTCAACGAAGACGGTACGGTGCGGTACTTCATTGATGCCAGCCAGGAAGACCACCGAAGCTGGATGACCTACATCAAGTGTGCCCGGAATGAGCAGGAGCAAAACCTGGAGGTGGTCCAGATCGGCACCAGCATCTTCTACAAGGCCATCGAGATGATCCCCCCGGACCAGGAACTGCTGGTGTGGTACGGAAACTCACACAACACCTTCCTGGGCATCCCCGGGGTGCCCGGGCTGGAGGACGAGCAGAAGAAGAACAAACATGAGGACTTCCACCCCGCGGACGCGGCTGCGGGCACGGCGGGCCGCATGCGCTGCGTCATCTGCCACCGCGGCTTCAACTCGCGCAGCAACCTGCGCTCGCACATGCGCATCCACACGCTGGACAAGCCCTTCGTGTGCCGCTTCTGCAACCGGCGCTTCAGCCAGTCATCCACGCTGCGCAACCACGTGCGCCTGCACACGGGCGAGCGGCCCTACAAGTGCCAGGTGTGCCAGAGCGCCTACTCGCAGCTGGCCGGCCTGCGCGCCCACCAGAAGAGCGCGCGCCACCGGCCGCCCAGCGCCGCGCTGCAGCCCCAGTCGCCCGCGCTCCCCGCGCCGCACGCGCACGCGCCCGCNNNCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGCACCACCTGCCGGCCTTGGTGCTGTGA

Related Sequences

XP_004849163.1 Protein

Prdm12 PREDICTED: PR domain zinc finger protein 12 isoform X1 [Heterocephalus glaber]

Length: 367 aa      View alignments
>XP_004849163.1
MMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNALGEQLLEDRSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPVEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEDEQKKNKHEDFHPADAAAGTAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPSAALQPQSPALPAPHAHAPAXAAAAAAAAAAAAHHLPALVL