Sequence details NCBI ID: XM_004849099.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nup214
Gene Name nucleoporin 214kDa, transcript variant X5
Entrez Gene ID 101722062

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUP214 ENSCPOG00000003123 (Guinea pig)

Gene Details

nucleoporin 214kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002829, Guinea pig)

Protein Percentage 83.48%
CDS Percentage 84.27%
Ka/Ks Ratio 0.22959 (Ka = 0.1019, Ks = 0.4438)

NUP214 ENSG00000126883 (Human)

Gene Details

nucleoporin 214kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000352400, Human)

Protein Percentage 79.42%
CDS Percentage 80.18%
Ka/Ks Ratio 0.20547 (Ka = 0.1293, Ks = 0.6294)

Nup214 ENSMUSG00000001855 (Mouse)

Gene Details

nucleoporin 214

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066492, Mouse)

Protein Percentage 76.19%
CDS Percentage 78.08%
Ka/Ks Ratio 0.22877 (Ka = 0.1555, Ks = 0.6798)

Nup214 ENSRNOG00000023393 (Rat)

Gene Details

nucleoporin 214 (Nup214), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033579, Rat)

Protein Percentage 75.41%
CDS Percentage 76.77%
Ka/Ks Ratio 0.21859 (Ka = 0.1668, Ks = 0.7633)

Genome Location

Sequence Coding sequence

Length: 6249 bp    Location: 4738804..4655347   Strand: -
Raw sequence   
>XM_004849099.1
ATGGGAGACGAGATGGATGCCATGATCCCGGAGCGAGAGATGAAGGATTTTCAGTTTAGAGCACTGAAGAAAGTGAGACTCTTCGACTCCCCTGAGGAGCTGCCCAAGGAACGCTCGAACCTGCTTGCCATATCCAACAAGTATGGGCTGCTCTTTGCTGGTGGAGCCAGTGGGCTGCAGGTTTTCTCTACGAAAAACCTGCTTGTTCAAAACAAACTTGGAGATGATCCCAATAAAATAGTGGACAAGGTCGAGAGCTTGCTCGTCCCTATGAAATTCCCAGTGCATCACCTGGCCCTGAGCTGCGACAACCTCACGCTGTCTGTGTGCATGATGTCCGGGGAATATGGCTCCATCATCGCTTTCTTTGATGTCCGGACGTTCTCAAATGAGGCTAAACAGCAGAAACGCCCATTTGCCTATCACAAGCTTTCGAGAGATGCGGGCGGCATGGTGATCGATATGAAGTGGAACCCCGCCGTCCCCTCCATGGTGGCAGTTTGTCTGGCTGATGGCAGTATTGCTGTCCTGCAAGTCACAGACGTGGTGAAAGTGTGTGCCACTCTTCCTCCCACGGTGGCAGTAACGTCCGTGTGCTGGAGCCCCAAGGGGAAGCAGCTGGCGGTGGGAAAGCAGAATGGAACTGTGGTCCAGTACCTTCCTACTTTACAGGAAAAAAAAGTGATTCCTTGCCCTCCATTTTATGAGGCGGATCACCCCGTGAGAGTGCTGGATGTGCTGTGGATTGGGACCTATATCTTCACCATCGTCTATGCTGCTGCAGATGGCACTTTGGAGACGTCTCCAGAGGTGGTGATGGCACTGCTTCCGAAAAAGGAAGAGAAGCACCCGGAAATCTTTGTGAACTTCATGGAGCCCTGCTACGGCAGCTGTGCAGAGAGGCAGCACCATTACTACCTCAGCTACGTGGAGGAGTGGGATCTGGTGCTGGCAGCATCTGCAGCTTCCACAGAAGTCAGTATCCTCGCTCGGCAAAGTGACCAGATTAATTGGGAATCTTGGCTCCTGGAGGACTCCAGTCGAGCTGAGCTGCCGGTGACAGACAAAAGCGATGACTCCCTCCCTATGGGAGTGGCCATCGACTATACCAACCAGGTGGAGGTCGCCATCAACGAAGAGAAGACTCTTCCTCCTGCCCCAGTTCTCCTGTTACTTTCAACAGATGGTGTGCTTTGTCCATTTTACATGATCAATCAGAACCCCGGGGCTAGGCCTGTCATCAGGACCCCGGAGTGGTTGTCACCAGAAGGCGAGCGACAGCCCAAGTCTTCAGGAAGCACTCCCACCACCCCGGTCTCCTCTCAGTCCCTGCCCAAACCGGATGGCTCAGGGGCAGCAGCCCCTGCCTCCCTTCCCCCAGTGGCCCCTGCTGCTCCCGGTGCCACCTTTGCTCTGCCCTCTGCTGGGGTGACCTCGGCTGTGTTCGCCTTTGGCTCCTCGTCTGTGAAGCCCTCTGCGCCTGTCCCCGGGGAGCCCCCTCCATATCCCAGCGGCTCTGATGGCCCCAAAGCAGTCCTGGGTGCCACCGCCCCCACCTTCTCCTTGGCGGCTCCCTCCAAGGGCTCCCTGGCCGCCACGCCTGCAGCTTCGCCTGTCACCCCATCTGCTGCTTCCTTCTTCGGCTCCTCGGGTTTCAAGCCTGCCCTGGAGAGCACCCCGATGGCCAGTGCATCTGCGCCGCACTCAGGAGTGAAGCCCATCTTCCCACCCTCAGCTGCAGTGGTCAAGGTGAACCTGAGTGAAAAGTTCACTGCTGTGGCCACCTCTGCTCCTGTTCTCAGCTCTCCGAGTGCACCATCCATGCTGCCCTTCTCGTGTGCATCCAAGCCAGCTTCTCCTGGACTGCTCAGCCACCCCACACCTCTCTCAGTGCCGTCCAGCTCCACGTCTCTGAAGCCCATGGTGGCTCTTGCACCCTCAGTGCGATCCGCTCAGAGCAGCCCGGGTCCCACGCCCTCTATGGTGCAGAAGTCGCCCAGGGTCACCCCGCCAGTGACGAAGGCCGGCTCTCTGCAGCCAAAGTCACTTCAGCCTCCTGTCTCAGAAAAACAGGGACATCAGTGGAAAGACTCAGACCCTGTGATGGCTGGGATTGGAGAAGAGATTGCACACTTCCAGAAGGAGCTGGAGGAGCTGAAAGCCCGGACTTCCAAAGCCTGCTTCCAGGTGGGCACCCCGGAGGAGATGCAGATGCTGCGGACAGAGTCGGCCGACCTGCACACCTTCCTTCTGGAGATTAAAGAGACCACAGAGTCTCTTCACGGAGACATAAGCACCCTGAAGACGACCCTGCTTGAGGGCTTTGCCGGTGTGGAAGAAGCCAGAGAGCAGGACGGGAGAAACCATGACTCTGGGTATCTCCATCTGCTCTACAAGAGGCCGCTGGACCCCAGGAGTGAAGCTCAGCTGCAGGAAATTCGGCGCCTCCATCAGTACGTGAAGTTTGCTGTCCAGGATGTGAATGACGTCTTGGACTTGGAGTGGGATCGGCATCTGGAGCAAAAGAAAAAACAAAAGCGCCTGCTTGTGCCAGAGCGAGAGACGCTGTTCAACACCCTGGCCAACAACCGGGAGATCATCAACCAGCAAAGGAAACGGCTGAACCACCTGGTGGACAGTCTGCAGCAGCTGCGCCTCTACAACCAGACGTTCCAGTGGAGCCTGCCCTTGGCTGCGCCAGCCCAGAGCAGCACTCACAGCTTTGACAGCGACCTGGAAAGCCTGAGCAACGCTTTGTTAAAAACCACCATCGACTCTCACACCAAGCCCTTGCCCAGGGTGCCAGGTAAACTGTCGCCGGTGAAACAGACACAGCTGAGAAACTTCCTGGCCAAGAGGAAGACGCCGCCAGTGAGATCCACTGCTCCAGCCAGCCTGTCCCGGTCGGCCTTCCTGTCGCAGAGATACTACGAGGACTTGGATGAAGCCAGCTCTACGTCGTCCATCTCCCAGTCTCTGGAGGGGGAAGAGGTGCGGGTGTCCTGCAGAGATGACGAGGTGGTCCAGGTGCCCCGGCATGCACCTGTGGTCCGCACACCCTCTGTTCAGCCAGGCCTCCTGCCCCAAGCGATGCCTTTTGCCAAATCTCACCTGATCCATGGCTCTTCGCCTTCCCCCGTGGGAGTATCACTGTCTACATCTGCTAGCAAAGTTGTTCCTCAGGGGGCCGACAGCACAATGCTGGCGACAAAAACCGTGAAACACGGTGCTCCTGGGCCCTCCCACCCTATCGCCGCCCCACAGGCGGCCGCAGCTGCAGCCCTGAGACGGCAGATGGCCAGTCAGTCACCAGCTGTCAGCACTTTGACCGAATCGACTCTGAAAAACGTGCCTCAGGTGGTCAACGTGCAGGAGTTGAAGAATAATCCCACAGCTCCCTCTGCAGCCATCGGGTCTCCGGTGCCGTACTCCACCACCAAAGTGCCCCACCCCACGCTTGCCCCAGTGGCCACCAGCCAAGCCAAGCAGGGATCTCTGATGAATTCCCTGAAGCCGTCTGGGCCCATGCCAGCATCCAGTCAGTTGTCACCTGCTGATAAAGTCCCAGGGCCAGGGACGGCCAAGGTGGAAGCAGCTGTGACCCCGACTCCATCTGCCGTGGGGCAGGGCAGCAAGCCCTTCTCGTTCGCACCGTCAGGGACTGGATTTAGTTTTGGGATAATCACACCAACACCATCTTCTAACTTCACTGGCACACAAGGGGCAGCATCTCCCACCAAGGACTCAAGCCAGCTCGACACATTCCCCTTCGGTGGGGCCAGCAAACCCTTTTACGAGACGGTCCCCGAAAGCACCACTCCCTCAGGACTCACACCAGTCCCCAGCGCTGCGAGAAATGCTGCTACCTCTCTAGGGGAGCACCCCCCCTCCAGCAGCAGGCCTGGGGTACCTTCTGGAGCCCTACTGCCCACTAGCAAGCCAGAAGCCCCACCATCCAAGCTGGGAGAACTTTTGTTCCCCAGCTCCTTGGCTGGAGAGACACTGGGAAGCTTCTCAGGGCTTCGTGTGGGCCAAATGGAGGACTCTGCAAAGCCCGCCAGTAAGTCTCCCTCCCCGAGCCTGGCTGGGGCACAGCCAGCCAAGACTCTGAGCACGGCCTCCGGGTTTAACTTCAGCAGCTCTCCCATGCTCGGGAAGCCTGCAGAGCCCCCAGCAACTTCTGCTGTGGCCGCCAGCACCGAAGCGCCACTGGCCACCACCAGCACGGGGACAGGCAGCTCCTCAGCGGGGGTCTTTAGCAGCCTGCAAATCGCCAGTGCAGGACCCTCTGGCACTGTCGGTTTTGGTGGGGCATCACTAAGTGGAAGCAAGGCTGTCTTTTCCTTTGGAAGCCAGCAGACCAGTGACACTGCGCTATCACCCACCCCCCCAGTGACGACACCAGCCGTTCCCCTCCCTGCATCGTTCCCTACCTTGTCCTTCAGTGACCTCCTGAACTCAGTGCCCGCACCCTCCCTGCCCGTGTCCTCTGGGAAGAGCACAGAGGAGGCCATATCATCAGCCCCTCCTGAGAAGCCGGGCAGCAGTGAGGGCTCCACATCCACAGTTGCACTTCCTGTGCAGCCGCAGGCCACCCAGCCCCCCCAGGCTCCCCTGCAGACCTCTGACCCCGTGAAGAAGGAGCCCATTCTTGTGCAGCCTGCAGCCAGCAGCCCCAGCCCTGCAGCACCTAGTGCCAGTCTCCCAGGACCTCCTTCAGAGGCCGCTCCCACAGCCCCTGGGGTCCTTGATGTCAAGGAGGAGACAGCATCTCCTGCTCCCATCTTCACAGCACCCGGACAGGCTGCTGTCACAGCCGCCACAGCCCCAAGCATGGGCTCTGCAGCCGTGGACGCTGCTCCGACCTCCAGCCCTGCTTGCAGCAGTGCTCCTGGCCCCACTGCAGATACGGCAGTGTTTGGGACTGTCACCTCTGGCTCCTCTGTCTTTACTCAGCCACCTGCCGCCAGCGCCAGCTCAGCATTCAGCCAGCTCACGAGCAACACAGCTACGGCCCCCTCCAGCACCCCTGTGTTTGGACAGGCGACAGGCAGCACAGCCAGCACAGCCACCGTGGGACCACAGGTCAGCAGCTCAGGCTTCAGCAGCCCAGCCTTCGGTGCTTCAGGCCCGGCTGTCTTCGGCCAGACAGCATTTGGGCAGGCCCCAGCCTTCGGCCAGGCAACCAGCACCCCCGTAAGCAGCTTCTCCTTCAGCCAGCCCGGGTTCAGCTCTGTACCTGCCTTTGGCCAGCCTTCTGCCTCTGCCCCTGTGTCCACAAGCGGCAGCGTCTTTGGGGCCTCATCGAGCACCAGCAGCGCCATCTCCTTCTCTTTCGGACAGTCCTCTGCCGGCACCGGGGCAGGGCTGTTTGGCCAGAACAACCCTCCTGCCTTTGGCCAGAGCCCTGGCTTCGGGCAGAGTGGCTCCATGTTCGGGGGTGCCGCAGCCACCACCTCTACAGCCACGCCTTCAGGCTTTAGCTTTAGTCAAGCTTCAGGCTTTGGATCTAGTAACACCGGTTCTGTGTTTGGTCAGGCAGCCAGTGCTGGCGGAACCATCTTTGGCCAGTCATCCACCTCTGGCGGGAGCGTGTTCGGGTCTGGAAACACTGGAAGGGGCGGAGGTTTCTTCAGTGGCCTTGGAGGGAAACCCAGCCAGGATGCAGCCAACAAAAACCCATTCGGCTCGACCAGTGGGGGCTTTGGATCTTCAGCTACCCCAAACACCTCTAACCTGTTTGGAAACAGTGGGGCCAAGAGCTTCGGAGGATTTGCCAGTTCATCCTTTGGGGAGCAGAAGCCTGCCGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCATCCCAAGGCTTCGGGTTTTCTGCACCTAGTAAAACAGGTGGCTTCGGTGCTGCTCCAGTGTTTGGCAGCCCTCCTACTTTTGGGGGATCCCCTGGGTTTGGAGGGGTGCCAGCATTCGGTTCAGCCCCAGCCTTTACAAGCCCTCTGGGCTCGACGGGAGGCAAAGTGTTCGGAGAGGGCACTGCAGCTGCCAGCGCGGGAGGATTCGGGTTCGGAAGCAGTAGCAACACCACATCCTTCGGCACCCTGGCCAGTCAGAATGCTCCTACTTTCGGGTCCCTGTCCCAGCAGAACTCCAGTTTTGGGACCCAGAGTGGCGGCTTCTCTGGTTTCGGACCCAGCACAGGAGCCTTCAGCTTTGGATCCTCTAACTCGTCTGTCCAGGGCTTCGGCGGCTGGAGAAGCTGA

Related Sequences

XP_004849156.1 Protein

Nup214 PREDICTED: nuclear pore complex protein Nup214 isoform X5 [Heterocephalus glaber]

Length: 2082 aa      View alignments
>XP_004849156.1
MGDEMDAMIPEREMKDFQFRALKKVRLFDSPEELPKERSNLLAISNKYGLLFAGGASGLQVFSTKNLLVQNKLGDDPNKIVDKVESLLVPMKFPVHHLALSCDNLTLSVCMMSGEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLSRDAGGMVIDMKWNPAVPSMVAVCLADGSIAVLQVTDVVKVCATLPPTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYEADHPVRVLDVLWIGTYIFTIVYAAADGTLETSPEVVMALLPKKEEKHPEIFVNFMEPCYGSCAERQHHYYLSYVEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVAIDYTNQVEVAINEEKTLPPAPVLLLLSTDGVLCPFYMINQNPGARPVIRTPEWLSPEGERQPKSSGSTPTTPVSSQSLPKPDGSGAAAPASLPPVAPAAPGATFALPSAGVTSAVFAFGSSSVKPSAPVPGEPPPYPSGSDGPKAVLGATAPTFSLAAPSKGSLAATPAASPVTPSAASFFGSSGFKPALESTPMASASAPHSGVKPIFPPSAAVVKVNLSEKFTAVATSAPVLSSPSAPSMLPFSCASKPASPGLLSHPTPLSVPSSSTSLKPMVALAPSVRSAQSSPGPTPSMVQKSPRVTPPVTKAGSLQPKSLQPPVSEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTPEEMQMLRTESADLHTFLLEIKETTESLHGDISTLKTTLLEGFAGVEEAREQDGRNHDSGYLHLLYKRPLDPRSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQKKKQKRLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYNQTFQWSLPLAAPAQSSTHSFDSDLESLSNALLKTTIDSHTKPLPRVPGKLSPVKQTQLRNFLAKRKTPPVRSTAPASLSRSAFLSQRYYEDLDEASSTSSISQSLEGEEVRVSCRDDEVVQVPRHAPVVRTPSVQPGLLPQAMPFAKSHLIHGSSPSPVGVSLSTSASKVVPQGADSTMLATKTVKHGAPGPSHPIAAPQAAAAAALRRQMASQSPAVSTLTESTLKNVPQVVNVQELKNNPTAPSAAIGSPVPYSTTKVPHPTLAPVATSQAKQGSLMNSLKPSGPMPASSQLSPADKVPGPGTAKVEAAVTPTPSAVGQGSKPFSFAPSGTGFSFGIITPTPSSNFTGTQGAASPTKDSSQLDTFPFGGASKPFYETVPESTTPSGLTPVPSAARNAATSLGEHPPSSSRPGVPSGALLPTSKPEAPPSKLGELLFPSSLAGETLGSFSGLRVGQMEDSAKPASKSPSPSLAGAQPAKTLSTASGFNFSSSPMLGKPAEPPATSAVAASTEAPLATTSTGTGSSSAGVFSSLQIASAGPSGTVGFGGASLSGSKAVFSFGSQQTSDTALSPTPPVTTPAVPLPASFPTLSFSDLLNSVPAPSLPVSSGKSTEEAISSAPPEKPGSSEGSTSTVALPVQPQATQPPQAPLQTSDPVKKEPILVQPAASSPSPAAPSASLPGPPSEAAPTAPGVLDVKEETASPAPIFTAPGQAAVTAATAPSMGSAAVDAAPTSSPACSSAPGPTADTAVFGTVTSGSSVFTQPPAASASSAFSQLTSNTATAPSSTPVFGQATGSTASTATVGPQVSSSGFSSPAFGASGPAVFGQTAFGQAPAFGQATSTPVSSFSFSQPGFSSVPAFGQPSASAPVSTSGSVFGASSSTSSAISFSFGQSSAGTGAGLFGQNNPPAFGQSPGFGQSGSMFGGAAATTSTATPSGFSFSQASGFGSSNTGSVFGQAASAGGTIFGQSSTSGGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFGSTSGGFGSSATPNTSNLFGNSGAKSFGGFASSSFGEQKPAGTFSSGGGSVASQGFGFSAPSKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTTSFGTLASQNAPTFGSLSQQNSSFGTQSGGFSGFGPSTGAFSFGSSNSSVQGFGGWRS