Details from NCBI annotation

Gene Symbol Fam78a
Gene Name family with sequence similarity 78, member A, transcript variant X2
Entrez Gene ID 101721476

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAM78A ENSCPOG00000001752 (Guinea pig)

Gene Details

family with sequence similarity 78, member A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001583, Guinea pig)

Protein Percentage 96.47%
CDS Percentage 94.58%
Ka/Ks Ratio 0.02265 (Ka = 0.0136, Ks = 0.5984)

FAM78A ENSG00000126882 (Human)

Gene Details

family with sequence similarity 78, member A

External Links

Gene Match (Ensembl Protein ID: ENSP00000361345, Human)

Protein Percentage 95.76%
CDS Percentage 92.34%
Ka/Ks Ratio 0.01954 (Ka = 0.0165, Ks = 0.8441)

Fam78a ENSMUSG00000050592 (Mouse)

Gene Details

family with sequence similarity 78, member A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052826, Mouse)

Protein Percentage 96.47%
CDS Percentage 89.87%
Ka/Ks Ratio 0.01205 (Ka = 0.0141, Ks = 1.1714)

Fam78a ENSRNOG00000023352 (Rat)

Gene Details

Protein Fam78a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032068, Rat)

Protein Percentage 96.47%
CDS Percentage 88.69%
Ka/Ks Ratio 0.01064 (Ka = 0.0144, Ks = 1.3566)

Genome Location

Sequence Coding sequence

Length: 852 bp    Location: 4623351..4638216   Strand: +
>XM_004849094.1
ATGCCCGGTTTCTGCTGGGACTGCTGGCCTTCCCTGGAGATCCGGGCGGTGCTGTGTACCATGGGCTGCATCCAGAGCATTGGGGGCAAAGCCAGAGTCTTCCGAGAAGGGATCACGGTCATCGACGTGAAGGCCTCCATCGACCCGGTCCCCACCAGCATCGATGAGTCCTCCAGCGTGGTGCTCCGATATCGCACGCCCCACTTCCGGGCCTCGGCCCAGGTGGTCATGCCGCCCATCCCCAAGAGGGAGACATGGATCGTGGGCTGGATCCAGGCATGCAGCCACATGGAGTTCTACAACCAGTATGGCGAGCAGGGCATGTCCAGCTGGGAGCTCCCCGACCTGCAGGAGGGCAAGATCGAGGCCATCAGCGACTCGGATGGGGTGAACTACCCCTGGTACGGCAACACCACGGAGACCTGCACCATCGTGGGCCCCACCAAGAGGGACTCCAAGTTCATCATCAGCATGAACGACAACTTCTACCCCAGTGTCACGTGGGCCGTGCCCGTGAGTGAGAGCAACGTGGCCAAGCTGACCAACATCTACCGGGACCAGAGCTTCACCACGTGGCTGGTGGCCACCAACACGTCCACCAATGACATGATCATCCTGCAGACGCTGCACTGGCGCATGCAGCTCAGCATTGACGTGAGCCCCACTCGGCCCCTGGGCCAGCGGGCCCGGCTGCGGGAGCCGATTGCACAGGACCAGCCCAAGATCCTGAGCAAGAACGAGCCCATCCCGCCCAGCGCCCTGGTCAAGCCCAACGCCAACGATGCGCAGGTCCTCATGTGGCGGCCCAAGTACGGGCCTCCGCTGGTGGTCATCCCACCCAAGCACCGATGA

Related Sequences

XP_004849151.1 Protein

Fam78a PREDICTED: protein FAM78A isoform X2 [Heterocephalus glaber]

Length: 283 aa      View alignments
>XP_004849151.1
MPGFCWDCWPSLEIRAVLCTMGCIQSIGGKARVFREGITVIDVKASIDPVPTSIDESSSVVLRYRTPHFRASAQVVMPPIPKRETWIVGWIQACSHMEFYNQYGEQGMSSWELPDLQEGKIEAISDSDGVNYPWYGNTTETCTIVGPTKRDSKFIISMNDNFYPSVTWAVPVSESNVAKLTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIDVSPTRPLGQRARLREPIAQDQPKILSKNEPIPPSALVKPNANDAQVLMWRPKYGPPLVVIPPKHR