Details from NCBI annotation

Gene Symbol Setx
Gene Name senataxin, transcript variant X3
Entrez Gene ID 101712154

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 7188 bp    Location: 3933384..4001600   Strand: +
>XM_004849059.1
ATGAGCACATGTTGTTGGTGTACACCAGGTGGTATTTCCACCACTGACTTCCTGAAGTGCTATGCATCGTCCAAGACCCAGGACCGTGAATTCCAAACAGCTGATGAAGATCTCTGCTACTGCTTGGAGTGTGTGGCTGAATACCACAAAGCAAGGGATGAACTGCCATTCTTGCATGAGGTTTTATGGGAATTAGAAACCTTACGTCTCATAAATCACTTTGAAAACTCCATGAAGGAAGAAATTGAAGATGATGATGAATTATACATAGTAGACAACAATGGAGAGGCACAGCTGTTTGATTTTAGTGGCCAAGACTTTGAAAATAAGATACGAGTTCCTCTTCTTGAAATACTGAAATATCCGTACCTGCTTCTACATGAGCGTGTTAATGAGCTCTGTGTTGAAGCACTTTGCCGGATGGAGCAAGCCAATTGCTCCTTTCAGGTTTTTGAAAAACATCCGGGGATCTATTTGTTTCTGGTCCATCCCAATGAAATGGTTCGGCGTTGGGCTATCCTGACTGCAAGAAACCTTGGAAAAGTGGACAGAGATGATTATTATGACTTACAGGAAGTGTTAACTTGCCTTTTTAAAGTCATTGAGTTGGGCCTTCTAGAAAGTCCAGACATTTATACTTCTTCAGTCCTTGAAAAGGGTAAACTGATTCTCCTGCCTGCACACATGTATGATACTACCAACTACAAAAACTATTGGTTAGGTATTTGCATGTTGCTGACAATTCTTGAGGAGCAAGCCATGGATTCGCTGTTGCTGGGCTCAGATAAACAAAACGATTTCATGCAATCAATCCTTCACACCATGGAGAGGCAGTCAGATGATGACAGTGTGAATCCTTTTTGGCCGGCATTACATTGTTTCATGGTAATCCTGGATCGCCTTGGATCTAAGGTCTGGGGTCAGCTGATTGATCCTATTGAGGCATTTCAAACCATTATCAACAATGTGAGCTATAATAAAGAGATCCAGAATATACGGAATAGCTCTATAAGGACCAAGTTAGAACCAGAGCCATGTTTGGATGATATGGTGACTTGCAGCCAGATTGTATACAGTTATAATCCTGAAAAGACAAAAAAGGATTCAGGGTGGAGAACAGCTATTTGCCCAGATTATTGTCCTAACATGTATGAAGAAATGGAAACATTGGCCAGTGTCCTTCAGTCAGACATTGGCCAAGACATGCGTGTTCATAACAGCACATTTCTGTGGTTTATACCTTTCGTTCAGTCTCTGATGGAGCTGAAGGATCTGGGCGTGGCTTACATCGTAGAAGTGATTCATCATCTGTACTCGCAGGTCAAGGATGTCCTCAACCAGACAGATGCTGTATGTGACAAAGTCACGGAATTTTTTCTTCTCATTTTGGTGTCAGTGGTTGAACTGCATAGAAATAAAAAATGTTTGCATTTGCTGTGGGTTAGTTCCCAGCAGTGGGTAGCAGCTGTAGTAAAATGTGCCAAGCTTCCTACTAGTGCATTTGTACGGAGTTCTGAGAAGTCAGCTGGAAGTTATTCCAAAGGAACAGCAATGATCACATCGCTACCACTGCATTTAGTGCCATCTAACTCTGTACAGCTTGCTTGTGTGCAGCTAATTAGGAGTCTCCTTAAAGAAGGTTATCAGCTTGGTCAGCAGACTCTCTGCAAGCGATTCTGGGATAAGCTTAACCTGTTCCTTCGAGGAAATTTGTCTCTAGGTTGGCAGTTGACTAGCCAGGAAACCCATGAGTTACAAACTTGTTTAAAACAAATAATTAGAAACAAATCCTTAGAAAAATTAAAAATACCTCCAAGTAACCCTTTTGTGGATCTGACTCCCACGTATAAAACCCCACCTGCATCTTTTAAAGAAGAAAGTGAACAAAAAAGGAAGAAGCCTAAAAAAGACATCTACTGTCTGGAAAATTCCTGCCTGACATTTTCTAAAGAACCAGTGAAAACTGAAACATCTCAAGTACAAGAGCATAGATTGATTAAAGCAAGTAACACTATAGAAGAAGGGGATAAAGAGCAAAATTATCTAAAGGATTTGAATGTTGAAGACCATCTCTCAGCTGAGTCATGGTTAAAGCTGAGTTGTAAAAGCCACTTTACTGAAAGAGCTCAAGATCAGACTAAAGTAAGTAAAAGGAAGCAGATGTCTGTGGAAGAGAGCTCTTCATGTACACCACAGATTTGTACTTCACGAAATGGTCGAGGAGGAGAAGGTGACAGAGCAATAATGATAACCCATTCATTGACTGATTCTGGCACTGGTTCTCCAGAACATGTGTCCACATTAAATGAGGATTTCTCCTTAAAGGATGATGCTCTTGGTAAATCTTCAAAACCAAAATCTAAGGCAGAGAAAGATAAAATCTGTACAAAGTTATCACATGTCATAAAGAAGCAACCCAGGAAAAGTGCGGTGGTCAATAATGCTGTCAGTGTACAGGAAAATCTGGCGGTAGGTAACATGGAGAGTTTTTGTTCAGAGAAAGATAAAGGTGTGCAGAAAGAAGGTGGAACCACACAGAGTCTGTCTTTAGACCCTGATGGCGTTCTGGTTGATGAAAATGGAGAACAAAAATCACAAAACAATTGGTTGCTGAAAAAGAAGCATTTAAAGAATGAAGAATTGGATATTTTTTCTTCCCATGAAAAGAGTTGTCAAATACAGAAGTGTCATGTTGATAAAGATTTGGTCTCATTAACAGAAATGAGCGATACTTCGGTAAAGAAGATGTCTCTCTGTAAGGAGCCTGGGACCATGCTTGAATCAAGAGATAAGGAAAGGACTAAGAGTACAGCTCTGATTTCCTCTGACTTGCAAAAAGAACCCTTTCCTAGCATTAGTCCTGAGTCTGACACCTTAACAGATTCTCAGGTAGACAGAGACCTCCACAAATTATCTTTAGTAGCTCAAGCCAGTGTTATTAAATTTCCATCAGATTTAACTCAAAAAAGCTCACGCCAGCTGCAAAGGAAAGGAAAAGATGATAAAAGATGCTTCACGGCTCATCATAACGTGGACAGCTGCTGTGGACAAGTTATTGTTATTTCAGATTCTGATGATGAAGATGAAATTCTGGGTTTTGAGAAACACATTGAAAAGGACAAAATACGCCTTAAGAAAGAATGTCCAGAGCAGCATGATTCAGTTAATACTAATGCAGACAAACAGCTTATAAAAGAAGAAAAAATGTCTTTTCTGTTTGAGGATTCTGATTCTCAGGTTTTTGAGTTTGAAAGTCAATCTCAAGTGTTTTCAGTTTGGCAGGATCAGAAAGTAGACAATCAGAATTCAGTTCAAGAGGAGGAAAAAAATTCATGTGTGACTCACATAGCTGATAGCACAAATAATTGGGGTAATGGTACGGATTATGTATCTGAAGAGGCTGTTCAAGAAGTAGCAAAGGACATTGGAGAACATGGAGAACCACATAGTAGCATTTCTGTTAAGGAATATGGTAAAACTAAAGTAAAAAATCGTAAGAGAAAGCAATTTGAACAGCCTGTAACTGAAGATCCTCCAAAGCCTTCACCTTCTGTCAGAAATGAGGACCAGTCTAACATTCTTAATGAGAGAGATCTTACTGAAAGTGATTTAAAATGTACCGAGATAAGTACCACAACTCCCAGTTCAAGTGTTGAGAGAGCTACCACCGTTCAAGCGAAGTCTGCTGCAAAGGCTTGTACTTACTCAAAACCTGCTAGGAAAGGACCAGTTTCTAAAACTCCTAAGAAAACACATTCAGATGCCAAAAAAGGGCAGAATAAAAGTTCACATTACCTAAGTTGTAGAACAGCTCCTGCTGTAGTGCCACCAAAGAAAACGCGCCATTGTCCTGAACCAACATCAACAGTTGAGAAACTTGGTCTGAAGAAAGCTCCTCGGAGGGCATTTGACTTGTCCCAGAGAACTTTAGACTCTATAGGTCAGTTACGGGATCATGGCAAAAATGTCGGAGCAGTTAGTACCCCAAAAAAGACGAAGTTAATTTCTCCCCAGACTCTCTCTGTTAAAAATAATAAGAAACTCCTGACAAGTCAGGATCTTCAGGTGCAAAGGCAGATGAGACAGAAATCACACAAAAAAAGGAAAGAACGTTGTAGTTACGAAGGTTCAAAGGCTACAAGACCAGGGCCAGGTAGAACACAGAATTCTGACATAGTTGTACCAGAATCTGATAGGTTAGATTATAATTCTAAAAGACATGAGGTACTTGCTAACATTAAGGAAAAACGGTTAGTAAAATCCATGCCTTCAGAACCAGAAGCCATAAAAGCACATTCTCAGGTGCCTGAGAATGCTTTAAACCATTGTGATTCCAGAGTGTTAAATGGAAGAATCCCAACAGATGAAATGATTGTCTCTACTTCAGAGGACCCTGTAGGTGGGGGTGAGCCAACAGGGCGTCAGGTAGCAGTGGCAACTCTGAGAGAGGCAGAACCAGAATCCAGTAGTGATACGGATGATGATGATTTATTTTTAACACAACATGGTCCTGAAGATATGGATTTATGTTCACAAATGGAGGATGAGAATGATAAACTCTTTGAAGTGCTTCATGGAAAAGTTAGAGTTCAGGTAGAAGGTTCTGGAAGTTGGCCTCAGTTGGCACAGAGTGGCACAAAGTGTAAGTACAAAGATTGTGCTGAAACTCTGAAGAACGAGGATGAGTATTGTCCAAGGCACTTAAAAGCTAAAGCAGCTGATGACAATGTATTTCGTAAGCCTGGCTTGCCTCCTCCCGCACGGAGACCTTCCACCACTAAAATTTTTAGCTCAAGTAGCACTTCCCGGATTGCCCATCTCTCCAAGTCTTTGGAAAGTTCTCCAGCACCTCCATCAGCTCTAAAAAGTAAATCAAATGGGGTACAGTCTATTTTAAAAGGGCCACAGCCCGCTTCCCCACCATCTCTCAAGCCAGTGGGTGAAGTGGATAGTTTATACAGTGTTCATTCTCAGACTCTAAATAATTCCAACAGGCAAGGTTACAAACTTCCACTTGGTGAAAACAAATCCTTCTCTGCTTCCCCTCCAATGAACATTCTTTTCTCACAGTCTATCTCTGACATCTTCATTAAAGAAGTCTTAAAATGGAAATACGAAATGTTTTTGAACTTCGATCTTTGTGGACCCCCAGCAAGTCTTTGCCAGTCCATCTCAAGACCTGTGCCTGTCAGATTTCAAGATTGTGGAGAGTATTTTGATGTTTTTTTACCTTTGATAATATTGAATACTTTTGAAACAGTGGCTCAGGAATGGATCAGCTCTCCAAATAAAAAGAATTTCTATGAGTTGCATTTACGAAAATTTCCGACTGATTATAAAAAAACCTGGGAATTTGTAGTGTATCTGGAGGAATGTGAACTGGCTAAACAGTTTCATCCGAAGGAAAATGATTTGGTGTTTTTGCTTCCTGAGAGACTAAGTGGAGAGAAAAATTATATAGAGAGAAATCACATCCAGGATCTCCATGAATATCACTGTGGTTACATTCACAGGTTTCGCCGCACGTCAGGCATGTGTAATGGAAAATCTGAGTGCTCCCTTTCCATTCAGACTCAAGATGATTTCCAAGCCAATTTAAATGAATTTATGAAATGCATTATAATCAGTTCTCTGGTGACTACACAAAGGAAGTTGAAAGCCATGTCTCTATTGAGTGGCCGGAACCAGCTGGCCAGAGCTATTCTGAATCCAAACCCCATGGATTTCTGTACCAAAGATTTACTAACTACAACATCTGAGAGAATTATAGCCTACTTAAAAGATTTCAATGAAGAGCAGAAAAAGGCAGTAGAAACTGCGTATGCCATGGTGAAACACTCGCCATCAGTTGCCAAAATCTGCCTGATTCATGGACCACCTGGGACTGGAAAATCAAAAACTATTGTTGGCCTCCTCTTCCGCTTACTGATGGAGAACCAGAGAGGGGGACACTTGGATGAAAACTCCAACGCCAAGATCAAACAGAACCGCGTCCTTGTGTGTGCTCCTTCCAATGCAGCTGTTGACGAACTTATGAAAAAAATTATCATCGAATTCAAAGAAAAATGTAAAGACAAGAGGAATCCTTTGGGAAACTGTGGAGATATAAATTTGGTACGACTGGGTCCAGAAAAATCTATCAACAGTGAGGTCCTAAAATTCAGTTTGGACAGCCAAGTGAACCACAGAATGAAAAAAGACTTACCTTCTCATGTTCAGGAGATGCATAGAAGAAAGGAGTTTCTAGATCATCAGCTAGATGAGCTTTCCCGTCAGCGAGCTTTATGCCGAGGTGGAAGAGCAATGCAGAGGCAAGAATTAGATGAAAAAATTGCTAAAGTTTCCAAAGAAAGGCAAGAACTTGCTTCTAAAATTAAAGAGGTGCAGGGGCGCCCACAGAAGGCCCAGAGTACCGTGATTTTAGAGTCCCATATCATCTGCTGCACGCTGAGCACCAGTGGTGGTTTGCTGCTCGAGTCTGCTTTTCGGGGCCAGGGAGGTGTCCCCTTCAGTTGTGTCATTGTCGATGAGGCCGGGCAGTCCTGTGAAGTTGAGACCCTGACCCCTCTCATCCACCGCTGCAACAAGCTCATCCTAGTAGGAGACCCTAAGCAGCTGCCCCCCACAGTCATTTCCATGAAGGCCCAGGAGTACGGCTATGACCAGTCGATGATGGCACGCTTCTGCAGACTGCTGGAGGAGAGAGTGGAGCAGAACACGATCGGCAGGCTGCCCGTGCTGCAGCTCACTGTGCAGTACAGGATGCACCCGGACATCTGCCTCTTCCCGTCCAATTACATTTATAACAGAAGTTTGAAAACACATCGGTTTACTGAATCTGTTCGATGTTCATCAGACTGGCCCTTTCAGCCTTACCTTGTGTTTGATGTCGGAGACGGTTCAGAAAGACGGGATAATGACTCATATGTAAATGGTCAAGAAATAAAATTGGTGATGGAAATAATTAAACTGATTAAAGAAAAAAAGAGAGAGATTAATTTCCGAAACATTGGCATAATAACTCATTACAAGGCTCAGAAGATAATGATTCAGAAGGATTTGGACAAAGAGTTTGACAGGAAAGGACCAGCAGAGGTGGACACCGTGGATGCCTTCCAGGGCCGCCAGAAGGACTGCATCATTGTCACCTGTGTCCGAGCAAATGCCATGCAGGGCTCCATCGGGTGA

Related Sequences

XP_004849116.1 Protein

Setx PREDICTED: probable helicase senataxin isoform X3 [Heterocephalus glaber]

Length: 2395 aa     
>XP_004849116.1
MSTCCWCTPGGISTTDFLKCYASSKTQDREFQTADEDLCYCLECVAEYHKARDELPFLHEVLWELETLRLINHFENSMKEEIEDDDELYIVDNNGEAQLFDFSGQDFENKIRVPLLEILKYPYLLLHERVNELCVEALCRMEQANCSFQVFEKHPGIYLFLVHPNEMVRRWAILTARNLGKVDRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLILLPAHMYDTTNYKNYWLGICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVNPFWPALHCFMVILDRLGSKVWGQLIDPIEAFQTIINNVSYNKEIQNIRNSSIRTKLEPEPCLDDMVTCSQIVYSYNPEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMELKDLGVAYIVEVIHHLYSQVKDVLNQTDAVCDKVTEFFLLILVSVVELHRNKKCLHLLWVSSQQWVAAVVKCAKLPTSAFVRSSEKSAGSYSKGTAMITSLPLHLVPSNSVQLACVQLIRSLLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNKSLEKLKIPPSNPFVDLTPTYKTPPASFKEESEQKRKKPKKDIYCLENSCLTFSKEPVKTETSQVQEHRLIKASNTIEEGDKEQNYLKDLNVEDHLSAESWLKLSCKSHFTERAQDQTKVSKRKQMSVEESSSCTPQICTSRNGRGGEGDRAIMITHSLTDSGTGSPEHVSTLNEDFSLKDDALGKSSKPKSKAEKDKICTKLSHVIKKQPRKSAVVNNAVSVQENLAVGNMESFCSEKDKGVQKEGGTTQSLSLDPDGVLVDENGEQKSQNNWLLKKKHLKNEELDIFSSHEKSCQIQKCHVDKDLVSLTEMSDTSVKKMSLCKEPGTMLESRDKERTKSTALISSDLQKEPFPSISPESDTLTDSQVDRDLHKLSLVAQASVIKFPSDLTQKSSRQLQRKGKDDKRCFTAHHNVDSCCGQVIVISDSDDEDEILGFEKHIEKDKIRLKKECPEQHDSVNTNADKQLIKEEKMSFLFEDSDSQVFEFESQSQVFSVWQDQKVDNQNSVQEEEKNSCVTHIADSTNNWGNGTDYVSEEAVQEVAKDIGEHGEPHSSISVKEYGKTKVKNRKRKQFEQPVTEDPPKPSPSVRNEDQSNILNERDLTESDLKCTEISTTTPSSSVERATTVQAKSAAKACTYSKPARKGPVSKTPKKTHSDAKKGQNKSSHYLSCRTAPAVVPPKKTRHCPEPTSTVEKLGLKKAPRRAFDLSQRTLDSIGQLRDHGKNVGAVSTPKKTKLISPQTLSVKNNKKLLTSQDLQVQRQMRQKSHKKRKERCSYEGSKATRPGPGRTQNSDIVVPESDRLDYNSKRHEVLANIKEKRLVKSMPSEPEAIKAHSQVPENALNHCDSRVLNGRIPTDEMIVSTSEDPVGGGEPTGRQVAVATLREAEPESSSDTDDDDLFLTQHGPEDMDLCSQMEDENDKLFEVLHGKVRVQVEGSGSWPQLAQSGTKCKYKDCAETLKNEDEYCPRHLKAKAADDNVFRKPGLPPPARRPSTTKIFSSSSTSRIAHLSKSLESSPAPPSALKSKSNGVQSILKGPQPASPPSLKPVGEVDSLYSVHSQTLNNSNRQGYKLPLGENKSFSASPPMNILFSQSISDIFIKEVLKWKYEMFLNFDLCGPPASLCQSISRPVPVRFQDCGEYFDVFLPLIILNTFETVAQEWISSPNKKNFYELHLRKFPTDYKKTWEFVVYLEECELAKQFHPKENDLVFLLPERLSGEKNYIERNHIQDLHEYHCGYIHRFRRTSGMCNGKSECSLSIQTQDDFQANLNEFMKCIIISSLVTTQRKLKAMSLLSGRNQLARAILNPNPMDFCTKDLLTTTSERIIAYLKDFNEEQKKAVETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLFRLLMENQRGGHLDENSNAKIKQNRVLVCAPSNAAVDELMKKIIIEFKEKCKDKRNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKKDLPSHVQEMHRRKEFLDHQLDELSRQRALCRGGRAMQRQELDEKIAKVSKERQELASKIKEVQGRPQKAQSTVILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEERVEQNTIGRLPVLQLTVQYRMHPDICLFPSNYIYNRSLKTHRFTESVRCSSDWPFQPYLVFDVGDGSERRDNDSYVNGQEIKLVMEIIKLIKEKKREINFRNIGIITHYKAQKIMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCIIVTCVRANAMQGSIG