Details from NCBI annotation

Gene Symbol Setx
Gene Name senataxin, transcript variant X1
Entrez Gene ID 101712154

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 8016 bp    Location: 3933400..4005275   Strand: +
>XM_004849057.1
ATGAGCACATGTTGTTGGTGTACACCAGGTGGTATTTCCACCACTGACTTCCTGAAGTGCTATGCATCGTCCAAGACCCAGGACCGTGAATTCCAAACAGCTGATGAAGATCTCTGCTACTGCTTGGAGTGTGTGGCTGAATACCACAAAGCAAGGGATGAACTGCCATTCTTGCATGAGGTTTTATGGGAATTAGAAACCTTACGTCTCATAAATCACTTTGAAAACTCCATGAAGGAAGAAATTGAAGATGATGATGAATTATACATAGTAGACAACAATGGAGAGGCACAGCTGTTTGATTTTAGTGGCCAAGACTTTGAAAATAAGATACGAGTTCCTCTTCTTGAAATACTGAAATATCCGTACCTGCTTCTACATGAGCGTGTTAATGAGCTCTGTGTTGAAGCACTTTGCCGGATGGAGCAAGCCAATTGCTCCTTTCAGGTTTTTGAAAAACATCCGGGGATCTATTTGTTTCTGGTCCATCCCAATGAAATGGTTCGGCGTTGGGCTATCCTGACTGCAAGAAACCTTGGAAAAGTGGACAGAGATGATTATTATGACTTACAGGAAGTGTTAACTTGCCTTTTTAAAGTCATTGAGTTGGGCCTTCTAGAAAGTCCAGACATTTATACTTCTTCAGTCCTTGAAAAGGGTAAACTGATTCTCCTGCCTGCACACATGTATGATACTACCAACTACAAAAACTATTGGTTAGGTATTTGCATGTTGCTGACAATTCTTGAGGAGCAAGCCATGGATTCGCTGTTGCTGGGCTCAGATAAACAAAACGATTTCATGCAATCAATCCTTCACACCATGGAGAGGCAGTCAGATGATGACAGTGTGAATCCTTTTTGGCCGGCATTACATTGTTTCATGGTAATCCTGGATCGCCTTGGATCTAAGGTCTGGGGTCAGCTGATTGATCCTATTGAGGCATTTCAAACCATTATCAACAATGTGAGCTATAATAAAGAGATCCAGAATATACGGAATAGCTCTATAAGGACCAAGTTAGAACCAGAGCCATGTTTGGATGATATGGTGACTTGCAGCCAGATTGTATACAGTTATAATCCTGAAAAGACAAAAAAGGATTCAGGGTGGAGAACAGCTATTTGCCCAGATTATTGTCCTAACATGTATGAAGAAATGGAAACATTGGCCAGTGTCCTTCAGTCAGACATTGGCCAAGACATGCGTGTTCATAACAGCACATTTCTGTGGTTTATACCTTTCGTTCAGTCTCTGATGGAGCTGAAGGATCTGGGCGTGGCTTACATCGTAGAAGTGATTCATCATCTGTACTCGCAGGTCAAGGATGTCCTCAACCAGACAGATGCTGTATGTGACAAAGTCACGGAATTTTTTCTTCTCATTTTGGTGTCAGTGGTTGAACTGCATAGAAATAAAAAATGTTTGCATTTGCTGTGGGTTAGTTCCCAGCAGTGGGTAGCAGCTGTAGTAAAATGTGCCAAGCTTCCTACTAGTGCATTTGTACGGAGTTCTGAGAAGTCAGCTGGAAGTTATTCCAAAGGAACAGCAATGATCACATCGCTACCACTGCATTTAGTGCCATCTAACTCTGTACAGCTTGCTTGTGTGCAGCTAATTAGGAGTCTCCTTAAAGAAGGTTATCAGCTTGGTCAGCAGACTCTCTGCAAGCGATTCTGGGATAAGCTTAACCTGTTCCTTCGAGGAAATTTGTCTCTAGGTTGGCAGTTGACTAGCCAGGAAACCCATGAGTTACAAACTTGTTTAAAACAAATAATTAGAAACAAATCCTTAGAAAAATTAAAAATACCTCCAAGTAACCCTTTTGTGGATCTGACTCCCACGTATAAAACCCCACCTGCATCTTTTAAAGAAGAAAGTGAACAAAAAAGGAAGAAGCCTAAAAAAGACATCTACTGTCTGGAAAATTCCTGCCTGACATTTTCTAAAGAACCAGTGAAAACTGAAACATCTCAAGTACAAGAGCATAGATTGATTAAAGCAAGTAACACTATAGAAGAAGGGGATAAAGAGCAAAATTATCTAAAGGATTTGAATGTTGAAGACCATCTCTCAGCTGAGTCATGGTTAAAGCTGAGTTGTAAAAGCCACTTTACTGAAAGAGCTCAAGATCAGACTAAAGTAAGTAAAAGGAAGCAGATGTCTGTGGAAGAGAGCTCTTCATGTACACCACAGATTTGTACTTCACGAAATGGTCGAGGAGGAGAAGGTGACAGAGCAATAATGATAACCCATTCATTGACTGATTCTGGCACTGGTTCTCCAGAACATGTGTCCACATTAAATGAGGATTTCTCCTTAAAGGATGATGCTCTTGGTAAATCTTCAAAACCAAAATCTAAGGCAGAGAAAGATAAAATCTGTACAAAGTTATCACATGTCATAAAGAAGCAACCCAGGAAAAGTGCGGTGGTCAATAATGCTGTCAGTGTACAGGAAAATCTGGCGGTAGGTAACATGGAGAGTTTTTGTTCAGAGAAAGATAAAGGTGTGCAGAAAGAAGGTGGAACCACACAGAGTCTGTCTTTAGACCCTGATGGCGTTCTGGTTGATGAAAATGGAGAACAAAAATCACAAAACAATTGGTTGCTGAAAAAGAAGCATTTAAAGAATGAAGAATTGGATATTTTTTCTTCCCATGAAAAGAGTTGTCAAATACAGAAGTGTCATGTTGATAAAGATTTGGTCTCATTAACAGAAATGAGCGATACTTCGGTAAAGAAGATGTCTCTCTGTAAGGAGCCTGGGACCATGCTTGAATCAAGAGATAAGGAAAGGACTAAGAGTACAGCTCTGATTTCCTCTGACTTGCAAAAAGAACCCTTTCCTAGCATTAGTCCTGAGTCTGACACCTTAACAGATTCTCAGGTAGACAGAGACCTCCACAAATTATCTTTAGTAGCTCAAGCCAGTGTTATTAAATTTCCATCAGATTTAACTCAAAAAAGCTCACGCCAGCTGCAAAGGAAAGGAAAAGATGATAAAAGATGCTTCACGGCTCATCATAACGTGGACAGCTGCTGTGGACAAGTTATTGTTATTTCAGATTCTGATGATGAAGATGAAATTCTGGGTTTTGAGAAACACATTGAAAAGGACAAAATACGCCTTAAGAAAGAATGTCCAGAGCAGCATGATTCAGTTAATACTAATGCAGACAAACAGCTTATAAAAGAAGAAAAAATGTCTTTTCTGTTTGAGGATTCTGATTCTCAGGTTTTTGAGTTTGAAAGTCAATCTCAAGTGTTTTCAGTTTGGCAGGATCAGAAAGTAGACAATCAGAATTCAGTTCAAGAGGAGGAAAAAAATTCATGTGTGACTCACATAGCTGATAGCACAAATAATTGGGGTAATGGTACGGATTATGTATCTGAAGAGGCTGTTCAAGAAGTAGCAAAGGACATTGGAGAACATGGAGAACCACATAGTAGCATTTCTGTTAAGGAATATGGTAAAACTAAAGTAAAAAATCGTAAGAGAAAGCAATTTGAACAGCCTGTAACTGAAGATCCTCCAAAGCCTTCACCTTCTGTCAGAAATGAGGACCAGTCTAACATTCTTAATGAGAGAGATCTTACTGAAAGTGATTTAAAATGTACCGAGATAAGTACCACAACTCCCAGTTCAAGTGTTGAGAGAGCTACCACCGTTCAAGCGAAGTCTGCTGCAAAGGCTTGTACTTACTCAAAACCTGCTAGGAAAGGACCAGTTTCTAAAACTCCTAAGAAAACACATTCAGATGCCAAAAAAGGGCAGAATAAAAGTTCACATTACCTAAGTTGTAGAACAGCTCCTGCTGTAGTGCCACCAAAGAAAACGCGCCATTGTCCTGAACCAACATCAACAGTTGAGAAACTTGGTCTGAAGAAAGCTCCTCGGAGGGCATTTGACTTGTCCCAGAGAACTTTAGACTCTATAGGTCAGTTACGGGATCATGGCAAAAATGTCGGAGCAGTTAGTACCCCAAAAAAGACGAAGTTAATTTCTCCCCAGACTCTCTCTGTTAAAAATAATAAGAAACTCCTGACAAGTCAGGATCTTCAGGTGCAAAGGCAGATGAGACAGAAATCACACAAAAAAAGGAAAGAACGTTGTAGTTACGAAGGTTCAAAGGCTACAAGACCAGGGCCAGGTAGAACACAGAATTCTGACATAGTTGTACCAGAATCTGATAGGTTAGATTATAATTCTAAAAGACATGAGGTACTTGCTAACATTAAGGAAAAACGGTTAGTAAAATCCATGCCTTCAGAACCAGAAGCCATAAAAGCACATTCTCAGGTGCCTGAGAATGCTTTAAACCATTGTGATTCCAGAGTGTTAAATGGAAGAATCCCAACAGATGAAATGATTGTCTCTACTTCAGAGGACCCTGTAGGTGGGGGTGAGCCAACAGGGCGTCAGGTAGCAGTGGCAACTCTGAGAGAGGCAGAACCAGAATCCAGTAGTGATACGGATGATGATGATTTATTTTTAACACAACATGGTCCTGAAGATATGGATTTATGTTCACAAATGGAGGATGAGAATGATAAACTCTTTGAAGTGCTTCATGGAAAAGTTAGAGTTCAGGTAGAAGGTTCTGGAAGTTGGCCTCAGTTGGCACAGAGTGGCACAAAGTGTAAGTACAAAGATTGTGCTGAAACTCTGAAGAACGAGGATGAGTATTGTCCAAGGCACTTAAAAGCTAAAGCAGCTGATGACAATGTATTTCGTAAGCCTGGCTTGCCTCCTCCCGCACGGAGACCTTCCACCACTAAAATTTTTAGCTCAAGTAGCACTTCCCGGATTGCCCATCTCTCCAAGTCTTTGGAAAGTTCTCCAGCACCTCCATCAGCTCTAAAAAGTAAATCAAATGGGGTACAGTCTATTTTAAAAGGGCCACAGCCCGCTTCCCCACCATCTCTCAAGCCAGTGGGTGAAGTGGATAGTTTATACAGTGTTCATTCTCAGACTCTAAATAATTCCAACAGGCAAGGTTACAAACTTCCACTTGGTGAAAACAAATCCTTCTCTGCTTCCCCTCCAATGAACATTCTTTTCTCACAGTCTATCTCTGACATCTTCATTAAAGAAGTCTTAAAATGGAAATACGAAATGTTTTTGAACTTCGATCTTTGTGGACCCCCAGCAAGTCTTTGCCAGTCCATCTCAAGACCTGTGCCTGTCAGATTTCAAGATTGTGGAGAGTATTTTGATGTTTTTTTACCTTTGATAATATTGAATACTTTTGAAACAGTGGCTCAGGAATGGATCAGCTCTCCAAATAAAAAGAATTTCTATGAGTTGCATTTACGAAAATTTCCGACTGATTATAAAAAAACCTGGGAATTTGTAGTGTATCTGGAGGAATGTGAACTGGCTAAACAGTTTCATCCGAAGGAAAATGATTTGGTGTTTTTGCTTCCTGAGAGACTAAGTGGAGAGAAAAATTATATAGAGAGAAATCACATCCAGGATCTCCATGAATATCACTGTGGTTACATTCACAGGTTTCGCCGCACGTCAGGCATGTGTAATGGAAAATCTGAGTGCTCCCTTTCCATTCAGACTCAAGATGATTTCCAAGCCAATTTAAATGAATTTATGAAATGCATTATAATCAGTTCTCTGGTGACTACACAAAGGAAGTTGAAAGCCATGTCTCTATTGAGTGGCCGGAACCAGCTGGCCAGAGCTATTCTGAATCCAAACCCCATGGATTTCTGTACCAAAGATTTACTAACTACAACATCTGAGAGAATTATAGCCTACTTAAAAGATTTCAATGAAGAGCAGAAAAAGGCAGTAGAAACTGCGTATGCCATGGTGAAACACTCGCCATCAGTTGCCAAAATCTGCCTGATTCATGGACCACCTGGGACTGGAAAATCAAAAACTATTGTTGGCCTCCTCTTCCGCTTACTGATGGAGAACCAGAGAGGGGGACACTTGGATGAAAACTCCAACGCCAAGATCAAACAGAACCGCGTCCTTGTGTGTGCTCCTTCCAATGCAGCTGTTGACGAACTTATGAAAAAAATTATCATCGAATTCAAAGAAAAATGTAAAGACAAGAGGAATCCTTTGGGAAACTGTGGAGATATAAATTTGGTACGACTGGGTCCAGAAAAATCTATCAACAGTGAGGTCCTAAAATTCAGTTTGGACAGCCAAGTGAACCACAGAATGAAAAAAGACTTACCTTCTCATGTTCAGGAGATGCATAGAAGAAAGGAGTTTCTAGATCATCAGCTAGATGAGCTTTCCCGTCAGCGAGCTTTATGCCGAGGTGGAAGAGCAATGCAGAGGCAAGAATTAGATGAAAAAATTGCTAAAGTTTCCAAAGAAAGGCAAGAACTTGCTTCTAAAATTAAAGAGGTGCAGGGGCGCCCACAGAAGGCCCAGAGTACCGTGATTTTAGAGTCCCATATCATCTGCTGCACGCTGAGCACCAGTGGTGGTTTGCTGCTCGAGTCTGCTTTTCGGGGCCAGGGAGGTGTCCCCTTCAGTTGTGTCATTGTCGATGAGGCCGGGCAGTCCTGTGAAGTTGAGACCCTGACCCCTCTCATCCACCGCTGCAACAAGCTCATCCTAGTAGGAGACCCTAAGCAGCTGCCCCCCACAGTCATTTCCATGAAGGCCCAGGAGTACGGCTATGACCAGTCGATGATGGCACGCTTCTGCAGACTGCTGGAGGAGAGAGTGGAGCAGAACACGATCGGCAGGCTGCCCGTGCTGCAGCTCACTGTGCAGTACAGGATGCACCCGGACATCTGCCTCTTCCCGTCCAATTACATTTATAACAGAAGTTTGAAAACACATCGGTTTACTGAATCTGTTCGATGTTCATCAGACTGGCCCTTTCAGCCTTACCTTGTGTTTGATGTCGGAGACGGTTCAGAAAGACGGGATAATGACTCATATGTAAATGGTCAAGAAATAAAATTGGTGATGGAAATAATTAAACTGATTAAAGAAAAAAAGAGAGAGATTAATTTCCGAAACATTGGCATAATAACTCATTACAAGGCTCAGAAGATAATGATTCAGAAGGATTTGGACAAAGAGTTTGACAGGAAAGGACCAGCAGAGGTGGACACCGTGGATGCCTTCCAGGGCCGCCAGAAGGACTGCATCATTGTCACCTGTGTCCGAGCAAATGCCATGCAGGGCTCCATCGGGTTCCTGGCCAGCTTGCAGAGGTTGAACGTCACCATTACACGCGCCAAGTACAGCCTCTTCATCCTCGGGCATCTGAGGACCCTGATGGAAAACCACCATTGGAACGAACTGATTCAGGATGCTCAGAAGCGTGGTGCCATCATCAAAACCTGTGACAAAAGCTATAGACATGATGCAGTGAAGATCCTGAAACTCAAGCCCCAGCTGCAGCGGAGTCTGACCCACCCCCCTACCATAGCCCCTGAGGTGTCCAGGCCCCAGGGCGGCCTGCCCAGCAACAGGCTGGACAGTGGGCTTGCCACAACGTCCTCGGCTGCCTCTCTGTACCACAGCCCCTCTGACTCCAACGAAGCTGCTGTCACTGTAACTGCAAGGGACCCAGAAAGGTCGCCCCTGCAGGAACGACTTCGGGACCCACGACTGCTCAAGAGATTTGAGGCTGAAGCCAAGGCAGGGACATTCCTCAGGGATCCACAGGCCATGAGCCCCCAGCATCCTGGAGGGATGCCTCCCTGGGCAGAGCTGGGCTTTTCTGTGACTTATCAGGACTTTGGCGGTGCCCTGCAGCCACCTGCTGCTAATGTCGCCCCTCAGAGCCACTACAGACCTCTGGCACAGGGTGAGCCTCCCGCTGCTGGCACTGATGCATTTGTGAGTAGAAAAGGTGGTAACCAGGAGGGCGGGCTGGGTCACAGGAGAGAGGGTTGGGCCTTCAGTGCGGGCGAGCAGGAAGAGGACTGTGGCTCTGCGACTTACTACCCAAAGAACTCCGCCTGGGACAGCAGGGGGGCAGAAGAGGACAGCAGTTCGAAGAAGAGAAAGCTTTTGTAG

Related Sequences

XP_004849114.1 Protein

Setx PREDICTED: probable helicase senataxin isoform X1 [Heterocephalus glaber]

Length: 2671 aa     
>XP_004849114.1
MSTCCWCTPGGISTTDFLKCYASSKTQDREFQTADEDLCYCLECVAEYHKARDELPFLHEVLWELETLRLINHFENSMKEEIEDDDELYIVDNNGEAQLFDFSGQDFENKIRVPLLEILKYPYLLLHERVNELCVEALCRMEQANCSFQVFEKHPGIYLFLVHPNEMVRRWAILTARNLGKVDRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLILLPAHMYDTTNYKNYWLGICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVNPFWPALHCFMVILDRLGSKVWGQLIDPIEAFQTIINNVSYNKEIQNIRNSSIRTKLEPEPCLDDMVTCSQIVYSYNPEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMELKDLGVAYIVEVIHHLYSQVKDVLNQTDAVCDKVTEFFLLILVSVVELHRNKKCLHLLWVSSQQWVAAVVKCAKLPTSAFVRSSEKSAGSYSKGTAMITSLPLHLVPSNSVQLACVQLIRSLLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNKSLEKLKIPPSNPFVDLTPTYKTPPASFKEESEQKRKKPKKDIYCLENSCLTFSKEPVKTETSQVQEHRLIKASNTIEEGDKEQNYLKDLNVEDHLSAESWLKLSCKSHFTERAQDQTKVSKRKQMSVEESSSCTPQICTSRNGRGGEGDRAIMITHSLTDSGTGSPEHVSTLNEDFSLKDDALGKSSKPKSKAEKDKICTKLSHVIKKQPRKSAVVNNAVSVQENLAVGNMESFCSEKDKGVQKEGGTTQSLSLDPDGVLVDENGEQKSQNNWLLKKKHLKNEELDIFSSHEKSCQIQKCHVDKDLVSLTEMSDTSVKKMSLCKEPGTMLESRDKERTKSTALISSDLQKEPFPSISPESDTLTDSQVDRDLHKLSLVAQASVIKFPSDLTQKSSRQLQRKGKDDKRCFTAHHNVDSCCGQVIVISDSDDEDEILGFEKHIEKDKIRLKKECPEQHDSVNTNADKQLIKEEKMSFLFEDSDSQVFEFESQSQVFSVWQDQKVDNQNSVQEEEKNSCVTHIADSTNNWGNGTDYVSEEAVQEVAKDIGEHGEPHSSISVKEYGKTKVKNRKRKQFEQPVTEDPPKPSPSVRNEDQSNILNERDLTESDLKCTEISTTTPSSSVERATTVQAKSAAKACTYSKPARKGPVSKTPKKTHSDAKKGQNKSSHYLSCRTAPAVVPPKKTRHCPEPTSTVEKLGLKKAPRRAFDLSQRTLDSIGQLRDHGKNVGAVSTPKKTKLISPQTLSVKNNKKLLTSQDLQVQRQMRQKSHKKRKERCSYEGSKATRPGPGRTQNSDIVVPESDRLDYNSKRHEVLANIKEKRLVKSMPSEPEAIKAHSQVPENALNHCDSRVLNGRIPTDEMIVSTSEDPVGGGEPTGRQVAVATLREAEPESSSDTDDDDLFLTQHGPEDMDLCSQMEDENDKLFEVLHGKVRVQVEGSGSWPQLAQSGTKCKYKDCAETLKNEDEYCPRHLKAKAADDNVFRKPGLPPPARRPSTTKIFSSSSTSRIAHLSKSLESSPAPPSALKSKSNGVQSILKGPQPASPPSLKPVGEVDSLYSVHSQTLNNSNRQGYKLPLGENKSFSASPPMNILFSQSISDIFIKEVLKWKYEMFLNFDLCGPPASLCQSISRPVPVRFQDCGEYFDVFLPLIILNTFETVAQEWISSPNKKNFYELHLRKFPTDYKKTWEFVVYLEECELAKQFHPKENDLVFLLPERLSGEKNYIERNHIQDLHEYHCGYIHRFRRTSGMCNGKSECSLSIQTQDDFQANLNEFMKCIIISSLVTTQRKLKAMSLLSGRNQLARAILNPNPMDFCTKDLLTTTSERIIAYLKDFNEEQKKAVETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLFRLLMENQRGGHLDENSNAKIKQNRVLVCAPSNAAVDELMKKIIIEFKEKCKDKRNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKKDLPSHVQEMHRRKEFLDHQLDELSRQRALCRGGRAMQRQELDEKIAKVSKERQELASKIKEVQGRPQKAQSTVILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEERVEQNTIGRLPVLQLTVQYRMHPDICLFPSNYIYNRSLKTHRFTESVRCSSDWPFQPYLVFDVGDGSERRDNDSYVNGQEIKLVMEIIKLIKEKKREINFRNIGIITHYKAQKIMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCIIVTCVRANAMQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENHHWNELIQDAQKRGAIIKTCDKSYRHDAVKILKLKPQLQRSLTHPPTIAPEVSRPQGGLPSNRLDSGLATTSSAASLYHSPSDSNEAAVTVTARDPERSPLQERLRDPRLLKRFEAEAKAGTFLRDPQAMSPQHPGGMPPWAELGFSVTYQDFGGALQPPAANVAPQSHYRPLAQGEPPAAGTDAFVSRKGGNQEGGLGHRREGWAFSAGEQEEDCGSATYYPKNSAWDSRGAEEDSSSKKRKLL