Sequence details NCBI ID: XM_004849052.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gtf3c4
Gene Name general transcription factor IIIC, polypeptide 4, 90kDa, transcript variant X2
Entrez Gene ID 101709731

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GTF3C4 ENSCPOG00000014247 (Guinea pig)

Gene Details

general transcription factor IIIC, polypeptide 4, 90kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012836, Guinea pig)

Protein Percentage 97.91%
CDS Percentage 92.19%
Ka/Ks Ratio 0.02628 (Ka = 0.01, Ks = 0.3797)

GTF3C4 ENSG00000125484 (Human)

Gene Details

general transcription factor IIIC, polypeptide 4, 90kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000361219, Human)

Protein Percentage 96.69%
CDS Percentage 89.49%
Ka/Ks Ratio 0.03447 (Ka = 0.0172, Ks = 0.4994)

Gtf3c4 ENSMUSG00000035666 (Mouse)

Gene Details

general transcription factor IIIC, polypeptide 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042265, Mouse)

Protein Percentage 93.5%
CDS Percentage 87.48%
Ka/Ks Ratio 0.05601 (Ka = 0.0339, Ks = 0.6049)

Gtf3c4 ENSRNOG00000012784 (Rat)

Gene Details

general transcription factor IIIC, polypeptide 4 (Gtf3c4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017389, Rat)

Protein Percentage 93.62%
CDS Percentage 88.06%
Ka/Ks Ratio 0.05793 (Ka = 0.0331, Ks = 0.5712)

Genome Location

Sequence Coding sequence

Length: 2448 bp    Location: 3692407..3670640   Strand: -
Raw sequence   
>XM_004849052.1
ATGAACACGGCCGACAAGGCCCGGCTGGGGCCCGCGGCCGACGGGCCTGTGCCGCCCGGCGAGGAGGAAGGCGAAGGGGGCGGGAAGGAGCCGGCGGCGGACGCAGCCCCCGGGCCCAGCGCCGCGTTCCGCCTCATGGTCACTCGGCGGGAGCCGGCTGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAGCCGCTGGCCTGGTCGGAGGACCACCGCGTGTCGGTGTCCACGGCCCGCAGCATCGCTGTTCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTGATCCACCGCACCTCGGTCCCCGCCCCGCTCAACAGCTGCCTCCTGAAAGTTGGCTCAAAAACAGAAGTTGCAGAGTGCAAGGAGAAATTTGCCGCCTCTAAAGACCCCACCATCAGCCAGACTTTCATGCTGGACAGGGTGTTTAACCCGGAGGGGAAGGCCCTGCCCGCGATGCGAGGGTTCAAGTACACTAGCTGGTCTCCCATGGGTTGTGATGCGAATGGCAGGTGCCTCTTGGCCGCTCTGACCATGGACAATCGCCTGACTGTCCAGGCGAACCTCAACAGACTCCAGTGGGTCCAGCTGGTGGATCTGACTGAGATTTATGGAGAGCGTTTGTATGAAACCAGTTATAGGCTCTCTAAAAATGAGGCCCCAGGGGGGAATCTTGGGGACTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGGATGGAGTGGTCGGGCATCTGCACCACTCAGCAGGTCAAGCACAACAATGAGTGCCGGGATGTTGGCAGTGTGCTCCTGGCGGTCCTTTTTGAAAATGGCAATATTGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAGGAGTCCATCTCTTCATGCAACACAATTGAGTCAGGAATCAGCTCGCCTAGTGTTTTGTTTTGGTGGGAGTATGAGCACAACAATCGGAAGATGAGCGGCCTTATTGTAGGGAGTGCTTTTGGGCCCGTGAAGATTCTCCCTGTGAACCTCAAGGCAGTCAAAGGCTACTTCACGCTGAGGCAGCCTGTTGTCTTGTGGAAAGAAATGGACCAGTTGCCTGTGCACAGCATCAAATGTGTGCCACTTTATCACCCTTACCAGAAGTGCAGCTGCAGCTTGGTGGTAGCCGCCAGGGGCTCCTATGTGTTCTGGTGTCTTCTCCTCATCTCCAAGGCGGGCCTGAATGTTCACAATTCCCATGTCACAGGCCTTCACTCGCTCCCCATTGTCTCCATGACTGCAGACAAACAGAATGGGACAGTGTACACTTGTTCCAGTGACGGGAAGGTGAGGCAGCTGATTCCTATTTTCACGGATGTGGCATTAAAGTTTGAACACCAGCTGATTAAGCTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATCGCAGTGAGCCCCTGCGGTGCATATCTGGCCATCATCACCACCGAGGGAATGGTCAACGGCCTCCATCCTGTTAACAAAAACTACCAGGTCCAATTTGTCACTCTCAAAACTTTTGAGGAAGCAGCTGCTCAGCTCCTGGAATCTTCCGTTCAAAATCTCTTTAAGCAGGTAGATTTAATAGACCTAGTTCGCTGGAAGATTTTAAAAGATAAACACATTCCTCAGTTTTTACATGAAGCTTTGGAAAAGAAAATCGAAAGCAGTGGGGTCACCTATTTTTGGCGCTTCAAGCTTTTCCTCCTGAGGATTTTGTACCAGTCAATGCAAAAAACTCCATCGGAAGTCTTGTGGAAGCCCACCCATGAGGACTCAAAAATCCTGCTAGTTGACTCGCCTGGGACGGGCAATGCTGAGGATGAACAGCAGGAAGAGGGCACTTCCTCCAGACAGGTGAGCAAGCAGGAAAGGAGCAAAGACGGTGACACAGAAGACCCAGTGGATGACTCGCTGCCCCCCTCAGGAGACTCGGGGGGCCGGGAGCCAATGGAGGAGAAGCTCCTGGAGATCCAAGGGAAGATCGAGGCCGTGGAGATGCACCTGACGAGGGAGCACATGAAGCGCGTCCTCGGGGAAGTGTACCTGCACACCTGGATCACAGAGAACACCAGCATCCCCACCCGAGGGCTCTGCAACTTCCTGATGTCTGATGATGAGTACGATGACAGAACAGCACGGGTGCTGATTGGACATATCTCCAAGAAGATGAACAAGCAGACTTTCCCTGAGCACTGCAGTTTGTGTAAGGAGATCTTGCCATTCACAGATCGCAAGCAAGCTGTCTGCTCCAACGGGCACATTTGGCTCCGGTGCTTTCTAACCTACCAGTCCTGCCAGAGCTTGATATACAGAAGGTGTTTGCTTCATGACAGCATTGCCCGGCACCCGGCTCCAGAAGATCCTGACTGGATTAAGAGGCTGCTGCAAAGCCCTTGCCCTTTCTGTGACTCTCCTGTCTTCTGA

Related Sequences

XP_004849109.1 Protein

Gtf3c4 PREDICTED: general transcription factor 3C polypeptide 4 isoform X2 [Heterocephalus glaber]

Length: 815 aa      View alignments
>XP_004849109.1
MNTADKARLGPAADGPVPPGEEEGEGGGKEPAADAAPGPSAAFRLMVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVAECKEKFAASKDPTISQTFMLDRVFNPEGKALPAMRGFKYTSWSPMGCDANGRCLLAALTMDNRLTVQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPGGNLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGISSPSVLFWWEYEHNNRKMSGLIVGSAFGPVKILPVNLKAVKGYFTLRQPVVLWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSVRTHGIAVSPCGAYLAIITTEGMVNGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLIDLVRWKILKDKHIPQFLHEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEVLWKPTHEDSKILLVDSPGTGNAEDEQQEEGTSSRQVSKQERSKDGDTEDPVDDSLPPSGDSGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDDEYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTYQSCQSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF