Details from NCBI annotation

Gene Symbol Gtf3c5
Gene Name general transcription factor IIIC, polypeptide 5, 63kDa, transcript variant X3
Entrez Gene ID 101701962

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GTF3C5 ENSCPOG00000011139 (Guinea pig)

Gene Details

general transcription factor IIIC, polypeptide 5, 63kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010017, Guinea pig)

Protein Percentage 89.68%
CDS Percentage 90.61%
Ka/Ks Ratio 0.11992 (Ka = 0.0493, Ks = 0.4108)

GTF3C5 ENSG00000148308 (Human)

Gene Details

general transcription factor IIIC, polypeptide 5, 63kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000361180, Human)

Protein Percentage 83.24%
CDS Percentage 85.55%
Ka/Ks Ratio 0.11689 (Ka = 0.0821, Ks = 0.7028)

Gtf3c5 ENSMUSG00000026816 (Mouse)

Gene Details

general transcription factor IIIC, polypeptide 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028157, Mouse)

Protein Percentage 84.99%
CDS Percentage 83.17%
Ka/Ks Ratio 0.08629 (Ka = 0.0792, Ks = 0.9182)

Gtf3c5 ENSRNOG00000010981 (Rat)

Gene Details

general transcription factor IIIC, polypeptide 5 (Gtf3c5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015068, Rat)

Protein Percentage 83.88%
CDS Percentage 83.17%
Ka/Ks Ratio 0.0952 (Ka = 0.0847, Ks = 0.8901)

Genome Location

Sequence Coding sequence

Length: 1563 bp    Location: 3415839..3402718   Strand: -
>XM_004849026.1
ATGGCGGCGGAGACGGCCGGCGCGGACCCGAATGTCGCCATCCCCTTGGACCTGCGGCGGGAGCGAAACTTGGTGTGCGTGGAGTACCCGGGCGGGGTGCGCGACGTGGCCAAGATGCTGCAGACGCTGGGCGGCGAGGAAGGCATCTCCCGAATCTACACAGACCCCACCAAGAGGCTGGAGCTGTATTTCCGGCCCAAGGATCTGTACTGCCACCCTGTGTGTGCCAACCGCTTCAGTACCAGCAGCTTGCTGCTGCGGATCAGAAGAAAGACTCGGCGGCAGAGAGTGGTGCCAGAGGCCGAGCCCCGCCCCCAGGTCACCTTCGACCTGGAGATCCTGGGCGTCGTCTCCACCATTTTTAAATTCCAGGGAATGTCTGACTTCCAGTACCTGGCCATCCACACGGAAGCAGGCGGCAAGCACATGTCCATGTATGACAAAGTGTTCATGCTCAAGCCCGAGAAGGAGAGTTTCTTCCACCAGGAGCTGCCGCTCTACATCCCCCCGCCCATCTTCTCCCGCCTGGACGCCCCGGTGGACTACTACTACCGACCAGAGACGCAGCACCGGGAAGGCTACAGCAACCCCCCCATCTCAGGTGAGAATCTGATTGGCCTGAGTAGGGCCCGGCGCCCCCACAATGCCATCTTTGTCAACTTCGAGGACCCCGAGGTGCCCATGCAGCCCTTGGAGGCTGCGGTCCAGACTTGGAAGAAGACCTGCACCAACCCCATTGACCAGGAGGTGGAGGAGGAGCTCAGGAAGCTGTTTGAACTCCGCCCCATCTGGTCACGCAATGCCGTGAAGGCCAACATCAGTGTCCACCCCGACAAGCTGAAGGTCTTGCTTCCCTTCATGGCCTATTACATGATCACAGGCCCCTGGAGAAGCCTGTGGGTTCGGTTTGGCTACGACCCGCGCAGACACCCAGAGGCCAAGAATTACCAAGTCCTTGATTTCCGCATCCGTTGTGGAATTAAATATGGTTATGGCTCCAGTGACATGCCTGTCAAAGCCAAGCGCAGCACCTACAACTACAGCCTCCCCATCACTGTCAAGAAGCCGCCCACCCAGTTCATCAGCATGCAGGACCTGAAGCAGGGCCTGGGCCCGTCAGGCACGGCCAGCCCCCGGAAACTGGCCTCCAACAAGTACAAGCTCAAGGACTCAGTCTACATCTTCCGGGAGGGGGCCCTGCCGCCCTATCGACAGATGTTCTACCAGCTGTGTGATTTGAACGTGGAAGAGTTGCAGAAGATCATTCACCGCAATGACGGGACGGAGAGTTTGTGCACGGAACGGGACGGGTGGTGCCTCCCCAAGACCAACGACGAGCTGAGGGACACCATGTCGCTCATGATCCGGCAGACCATCCGCTCCAGGAGGCCAGCTCTCTTCTCCAGCCCGACCAAGGCTGACCGCGCTGCAAAAGGGCAGCTTATGTTTGAGTCCGGGGAGGAGGAGGAAGAGGAAGAGGAGGAAGAGGAGGAGGAAGAAGACTTCAAGCCCTCGGATGGGAGTGAGAATGAGATGGAGACAGAGATTCTGGACTACGTGTGA

Related Sequences

XP_004849083.1 Protein

Gtf3c5 PREDICTED: general transcription factor 3C polypeptide 5 isoform X3 [Heterocephalus glaber]

Length: 520 aa      View alignments
>XP_004849083.1
MAAETAGADPNVAIPLDLRRERNLVCVEYPGGVRDVAKMLQTLGGEEGISRIYTDPTKRLELYFRPKDLYCHPVCANRFSTSSLLLRIRRKTRRQRVVPEAEPRPQVTFDLEILGVVSTIFKFQGMSDFQYLAIHTEAGGKHMSMYDKVFMLKPEKESFFHQELPLYIPPPIFSRLDAPVDYYYRPETQHREGYSNPPISGENLIGLSRARRPHNAIFVNFEDPEVPMQPLEAAVQTWKKTCTNPIDQEVEEELRKLFELRPIWSRNAVKANISVHPDKLKVLLPFMAYYMITGPWRSLWVRFGYDPRRHPEAKNYQVLDFRIRCGIKYGYGSSDMPVKAKRSTYNYSLPITVKKPPTQFISMQDLKQGLGPSGTASPRKLASNKYKLKDSVYIFREGALPPYRQMFYQLCDLNVEELQKIIHRNDGTESLCTERDGWCLPKTNDELRDTMSLMIRQTIRSRRPALFSSPTKADRAAKGQLMFESGEEEEEEEEEEEEEEDFKPSDGSENEMETEILDYV