Details from NCBI annotation

Gene Symbol Rxra
Gene Name retinoid X receptor, alpha
Entrez Gene ID 101723948

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RXRA ENSCPOG00000000168 (Guinea pig)

Gene Details

retinoid X receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000147, Guinea pig)

Protein Percentage 97.43%
CDS Percentage 93.93%
Ka/Ks Ratio 0.02709 (Ka = 0.0143, Ks = 0.5293)

RXRA ENSG00000186350 (Human)

Gene Details

retinoid X receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000419692, Human)

Protein Percentage 96.32%
CDS Percentage 90.84%
Ka/Ks Ratio 0.01638 (Ka = 0.0179, Ks = 1.0939)

Rxra ENSMUSG00000015846 (Mouse)

Gene Details

retinoid X receptor alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000076491, Mouse)

Protein Percentage 95.72%
CDS Percentage 87.79%
Ka/Ks Ratio 0.0181 (Ka = 0.0225, Ks = 1.2423)

Rxra ENSRNOG00000009446 (Rat)

Gene Details

retinoid X receptor alpha (Rxra), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012892, Rat)

Protein Percentage 95.5%
CDS Percentage 87.51%
Ka/Ks Ratio 0.01622 (Ka = 0.0224, Ks = 1.3812)

Genome Location

Sequence Coding sequence

Length: 1614 bp    Location: 2433060..2455749   Strand: +
>XM_004848999.1
ATGTGGGGGCGAGCTCAGGCACCTCCCTGGAGCTGGGGCCCCGTGGGAGGTTCTCCGTGGCCCTGGGGCCTCTGCACTGGCCTTGGCACAGCTGCTGGGTCCCTCAAGCCCTGTGCAGCACCTCCATGGCCAACTTCCCGAGACCTGGAGCTGGCCGGTCTGAGTGCCAAGCATGGTGGCAGTGGTGTCCTAAGGCTGGTGGCATGGCATTTCCGGGGCCAGGACACAGCCACTGCCGACTTCTCCACCCAAGTGAACTCCTCGCCCCTCAACTCCCCAACGGGCCGGGGCTCCATGGCTGCCCCCTCGCTACACCCTGCGCTGGGCCCTGCCATCGGCTCCTCGCTGGGCTCCCCAGGGCAGCTGCACTCGCCCATCAGCACGCTGAGCTCGCCCATCAATGGCATGGGCCCGCCCTTCTCTGTCATCAGCTCGCCCATGGGCCCCCACTCCATGTCAGTGCCTGCCACGCCCACCCTGGGCTTTGGCACTGGCAGCCCCCAGCTCAGCTCGCCCATGAACCCCGTGAGCAGCAGTGAGGACATCAAGCCCCCACTGGGGCTCAATGGTGTCCTCAAGGTCCCCGCCCACCCCTCAGGAAACATGGCGCCCTTCACCAAGCACATCTGTGCCATCTGCGGGGACCGTTCCTCAGGCAAGCACTACGGCGTGTACAGCTGTGAGGGCTGCAAGGGCTTCTTCAAGCGGACTGTGCGCAAGGACCTGACCTACACCTGCCGGGACAACAAGGACTGCCTGATCGACAAGCGGCAGCGCAACCGCTGCCAGTACTGCCGCTACCAGAAGTGCCTGGCCATGGGCATGAAGCGGGAAGCCGTGCAGGAGGAGCGGCAGCGGGGCAAGGACCGCAGCGAGAGCGAGGTGGAGTCGACCAGCAGCGCCAACGAGGACATGCCGGTGGAGAAGATCCTGGAGGCCGAGCTGGCCGTGGAGCCCAAGACGGAGACCTACGTGGAGGCGAACATGGGGCTGAACCCCAGTTCGCCCAACGACCCCGTCACCAACATCTGCCAGGCCGCAGACAAGCAGCTGTTCACGCTGGTGGAGTGGGCCAAGAGGGTCCCGCACTTCTCTGAGCTGCCGCTGGACGACCAGGTCATCCTGCTGCGGGCGGGGTGGAACGAGCTGCTCATCGCCTCCTTCTCCCACCGGTCCATAGCCGTGAAGGATGGGATCCTCCTGGCCACCGGGCTGCACGTGCACCGGAACAGTGCCCACAGCGCAGGGGTGGGCGCCATCTTTGACAGGGTGCTGACAGAGCTAGTGTCCAAGATGCGGGACATGCAGATGGACAAGACGGAGCTGGGCTGCCTGCGTGCCATTGTCCTCTTCAACCCAGACTCTAAGGGGCTCTCGAACCCCGCCGAGGTGGAGGCGCTGAGGGAGAAGGTGTACGCGTCGCTGGAGGCCTACTGTAAACACAAGTACCCGGAGCAGCCAGGCAGGTTCGCCAAGCTGCTGCTCCGGCTGCCGGCCCTGCGCTCCATCGGGCTCAAGTGCCTGGAGCATCTCTTCTTCTTCAAGCTCATCGGGGACACTCCCATCGACACCTTCCTCATGGAGATGCTGGAGGCCCCGCACCAGATGACCTAG

Related Sequences

XP_004849056.1 Protein

Rxra PREDICTED: retinoic acid receptor RXR-alpha [Heterocephalus glaber]

Length: 537 aa      View alignments
>XP_004849056.1
MWGRAQAPPWSWGPVGGSPWPWGLCTGLGTAAGSLKPCAAPPWPTSRDLELAGLSAKHGGSGVLRLVAWHFRGQDTATADFSTQVNSSPLNSPTGRGSMAAPSLHPALGPAIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPATPTLGFGTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMAPFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRSESEVESTSSANEDMPVEKILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRVPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT