Sequence details NCBI ID: XM_004848988.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sardh
Gene Name sarcosine dehydrogenase, transcript variant X15
Entrez Gene ID 101717296

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SARDH ENSCPOG00000012251 (Guinea pig)

Gene Details

sarcosine dehydrogenase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011019, Guinea pig)

Protein Percentage 80.55%
CDS Percentage 82.07%
Ka/Ks Ratio 0.17343 (Ka = 0.1273, Ks = 0.7339)

SARDH ENSG00000123453 (Human)

Gene Details

sarcosine dehydrogenase

External Links

Gene Match (Ensembl Protein ID: ENSP00000360938, Human)

Protein Percentage 77.3%
CDS Percentage 77.75%
Ka/Ks Ratio 0.11827 (Ka = 0.1498, Ks = 1.267)

Sardh ENSMUSG00000009614 (Mouse)

Gene Details

sarcosine dehydrogenase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099950, Mouse)

Protein Percentage 77.08%
CDS Percentage 75.59%
Ka/Ks Ratio 0.10827 (Ka = 0.1552, Ks = 1.4339)

Sardh ENSRNOG00000006916 (Rat)

Gene Details

sarcosine dehydrogenase (Sardh), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009555, Rat)

Protein Percentage 76.7%
CDS Percentage 75.75%
Ka/Ks Ratio 0.1082 (Ka = 0.1546, Ks = 1.4289)

Genome Location

Sequence Coding sequence

Length: 2931 bp    Location: 2069970..2030836   Strand: -
Raw sequence   
>XM_004848988.1
ATGGCTGGTGGTGCTCTCCAGAAGTTCTTTTTCCTCCCACTTCCTCTAGGTACCCACTTCTGCCTCCAGGGGGCAAATGCCCAGGCCCAGCCACGTGCGGTCACCTGGTCCAACCCTGCCCAGATCGCTGTGTGGCCCGAGGCCCGCTGGGCCCTTCTCTGGATTCTGGCGCTGCTCCGGGGACTTGGAAGCGGGTGCTGGTGTGTCCCTGCCAACCCGTTAGGTCCCCTTGTCCTGGTGTCCCGGTCTGGAAGGGAGCGACGCAGGCCCGCTGCCGGTGCTCCAAGTCCCCAAGTCCCCATGGCCTCACTGAACCGAGCCCTGCTTGTGGCCACTGCCTGCCCTCGATGGAGACCAGCCCAGCGCCTTGGGCTGCAGGCCCTGGCTGGTGCTGCGGGTCCCAAGGCAGAGAAGAATGTGCCCTACCAGCGCACCCTGAAGGAGGAGGCCCAGGGCCCTGGAGCGGCATCTCGAGGCCCCAGCCAGCCCCTGCCCAGCACAGCCAGCGTGGTGGTCATCGGCGGGGGCAGCGTGGGCTGCCAGACCCTGTACCACCTGGCCAAGCTGGGCGTGGCCGGGGCCGTGCTGCTGGAGCGTGAGCGACTGACGTCAGGGACCACCTGGCACACAGCAGGCCTGCTGTGGCAGCTTCGGCCCAGCGACGTGGAGGTGGAGCTGCTGGCACACACGAGGCGAGTGGTGAGCCGCGATCTGGAGGAGGAGACGGGGATGCACACGGGCTGGATCCAGAACGGGGGCCTCTTCATCGCGTCCAGTCGGCAGCGCCTGGACGAGTACAAGCGGCTCATGTCGCTGGGCAAGGCCTATGGTGTGGAGTCCCACGTGCTGAGTCCTGCGGAGACCAAGGTTCTGTACCCGCTGATGAAGGTGGATGACCTCTACGGGACGCTGTATGTGCCGCAGGACGGCACCATGGACCCCGCAGGCACCTGCTCCACCCTCGCCAGGGCGGCTGTGGCCCGAGGAGCCCGGGTGGCGCTGGCGTTTCTGCTGACTCCTGATGTCCCGCGCCCCGGCCCCACATCCACAGGGCTTCCCTCGAGCTTGGAGTCCCGGCAGGGCAGAGCGGCCCGCACAGCTGAGCCCCGTGCTGTGCCCGCAGGTGTGTGGGCAGGCGCTGTGGGCCGGATGGCTGGAGTCAAGGTGCCCCTGGTGGCCATGCACCATGCCTACGTCGTCACGGAGCGCATCGAGGGGATCCAGAACATGCCCAATGTCCGTGACCACGACGCCTCCGTCTACCTGCGCCTGCAAGGAGACGCCCTGTCTGTGGGCGGCTACGAGGCCAACCCCATCTTCTGGGAGGAGGTGTCGGACAAGTTCACCTTTGGCCTCTTTGACCTGGACTGGGACGTGTTCACCCAGCACATCGAGGGCGCCATCAACCGCGTCCCCGTGCTGGAGACCACGGGGATCAAGTCCACGGTCTGTGGCCCCGAGTCCTTCACGCCTGACCACAAGCCCCTGATGGGGGAGGCACCTGAGCTGAGGGGCTTCTTTCTGGGCTGCGGCTTCAACAGCGCTGGGATGATGCTGGGCGGCGGCTGTGGACAGGAACTGGCCCACTGGGTCATGCACGGGCGCCCGGAGAAGGACATGTACAGCTACGACATCAGGCGCTTCCACCCCTCCCTGACCGCACACCAGCGCTGGGTCCGCGAGCGCAGTCACGAATCCTACGCCAAGAACTACGCGGTTGTCTTCCCCCATGACGAGCCGCTGGCGGGGCGCAATATGAGGAGGAGCCTCCTGCACGAGGAGCTCCTGGGACAAGGCTGTGTGTTCCAGGAGCGACACGGCTGGGAGCGGCCCGGATGGTTCAGCCCGCAGGGCCCGGCCCCGGTCCTGGAGTACGACTACTACGGCGCCTACAGGAAGCGGCCTCACCGGGACTACGCCTACGCCCGGCTGCTGGCCGACGAGTACACCTTCAGCTTCCCACCCCAGCACCACGTGGGAGCTGAGGCCCCCACCCAGCACCAAGGCCCGGGGCGGCGGGGAGCACCGAGAAGTGTCCTGGTGCCGGGCAACTCTGGCCACCCAGGGCCTGTGGCTGAGAAGATGTCAGTGTCGCCTGGAAACCGTCCGCGCTTCCCCAGCCCTGGCCATGCTTCGTCTCACGCCGGCTGTGACGTGGCCGCTCTGGAAGGGAAGATCCAGAAGGAGTGCCTGGCCTGCCGAGGGGCGGCCGCCGTGTTCGACATGTCCTACTTCGGGAAGTTCTACCTGCTGGGGCCGGACGCCAGGAGGGCTGCTGACTGGCTCTTCTCTGCCAACGTCAGCCGACCCCCAGGTTCCACGGTGTACACCTGCATGCTGAACCACAGGGGCGGCACGGAGAGTGACCTGACGGTCAGCCGCCTGGCCCCCGGGACCCAGGCCTGCCCGGTGGCCCCGGCCTTCGAAGGCGACGGCTACTACCTGGCTGTGGGTGGAGGCATAGCCCAGCACAACTGGTGCCACATCACCACGGTGCTGCAGGACCAGCGCTTCCGGTGCCAGCTCGTGGACTGCTCCGAGGACCTGGGCCTGATCAGCATCCAGGGCCCGGCCAGCCGGGCCATCCTGCAGGAGGTGCTGGACGCAGACCTGAGCGACGCTGCCTTCTCCTTCTCCACCCACCAGCTGGTGCAGGCCGCCGGGCACCTGGCTACCGGCACTGGCATGCGGAGCTGCGGCCTGATGACAGCCCCCTGGAGGCCGGCCTGGCCTTCACCTGCAAGCTCAAGTCTGCCGAGCCCTTCCTGGGCCGTGAGGCCCTGGAGAAGCAGCGGGCTGAGGGCCTCCGCCGGCGCCTCGTGTGCCTCACTGTGGAGGAATCTCCCTGGACTTCGTGAAGAGTGGGGACTATGCCCTGGAGAGGATGGGGGTCCCTTACGCTGCCCAGGTCCACCTGAAACCCCTCTTTGA

Related Sequences

XP_004849045.1 Protein

Sardh PREDICTED: sarcosine dehydrogenase, mitochondrial isoform X15 [Heterocephalus glaber]

Length: 976 aa      View alignments
>XP_004849045.1
MAGGALQKFFFLPLPLGTHFCLQGANAQAQPRAVTWSNPAQIAVWPEARWALLWILALLRGLGSGCWCVPANPLGPLVLVSRSGRERRRPAAGAPSPQVPMASLNRALLVATACPRWRPAQRLGLQALAGAAGPKAEKNVPYQRTLKEEAQGPGAASRGPSQPLPSTASVVVIGGGSVGCQTLYHLAKLGVAGAVLLERERLTSGTTWHTAGLLWQLRPSDVEVELLAHTRRVVSRDLEEETGMHTGWIQNGGLFIASSRQRLDEYKRLMSLGKAYGVESHVLSPAETKVLYPLMKVDDLYGTLYVPQDGTMDPAGTCSTLARAAVARGARVALAFLLTPDVPRPGPTSTGLPSSLESRQGRAARTAEPRAVPAGVWAGAVGRMAGVKVPLVAMHHAYVVTERIEGIQNMPNVRDHDASVYLRLQGDALSVGGYEANPIFWEEVSDKFTFGLFDLDWDVFTQHIEGAINRVPVLETTGIKSTVCGPESFTPDHKPLMGEAPELRGFFLGCGFNSAGMMLGGGCGQELAHWVMHGRPEKDMYSYDIRRFHPSLTAHQRWVRERSHESYAKNYAVVFPHDEPLAGRNMRRSLLHEELLGQGCVFQERHGWERPGWFSPQGPAPVLEYDYYGAYRKRPHRDYAYARLLADEYTFSFPPQHHVGAEAPTQHQGPGRRGAPRSVLVPGNSGHPGPVAEKMSVSPGNRPRFPSPGHASSHAGCDVAALEGKIQKECLACRGAAAVFDMSYFGKFYLLGPDARRAADWLFSANVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPGTQACPVAPAFEGDGYYLAVGGGIAQHNWCHITTVLQDQRFRCQLVDCSEDLGLISIQGPASRAILQEVLDADLSDAAFSFSTHQLVQAAGHLATGTGMRSCGLMTAPWRPAWPSPASSSLPSPSWAVRPWRSSGLRASAGASCASLWRNLPGLREEWGLCPGEDGGPLRCPGPPETPL