Sequence details NCBI ID: XM_004848947.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Surf6
Gene Name surfeit 6, transcript variant X2
Entrez Gene ID 101709011

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SURF6 ENSCPOG00000023307 (Guinea pig)

Gene Details

surfeit 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016424, Guinea pig)

Protein Percentage 84.36%
CDS Percentage 87.99%
Ka/Ks Ratio 0.19313 (Ka = 0.0807, Ks = 0.4181)

SURF6 ENSG00000148296 (Human)

Gene Details

surfeit 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000361092, Human)

Protein Percentage 76.39%
CDS Percentage 80.09%
Ka/Ks Ratio 0.14787 (Ka = 0.1398, Ks = 0.9457)

Surf6 ENSMUSG00000036160 (Mouse)

Gene Details

surfeit gene 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048457, Mouse)

Protein Percentage 73.52%
CDS Percentage 78.12%
Ka/Ks Ratio 0.14762 (Ka = 0.1583, Ks = 1.0722)

Genome Location

Sequence Coding sequence

Length: 1116 bp    Location: 1804181..1799764   Strand: -
Raw sequence   
>XM_004848947.1
ATGGCCTCCCTGCTCGCCAAGGACGCCTACCTGCAGGACCTGGCCAGGAAGATCTGCGTTCAGCCGGGCCCGGAGCCGCCGAGGCGCCAGCGGGCGGGCAAAGCTCGAGGCTCAGAAGCTTTTGGGCCCCCAAAAAAGAAAAGGAAGAAAACACAAAAGAAGTCTCGAGAGCGGGAACAGAAGTCTGCAGAGCGCAAGGCCAAATCCGAGGGGGTGAAGTCTCCAATGGCTTCTGGGTCCAAGAAGCCAGCAGCAGTTAGAGAGGAGGCTCAAGTGCTGGCCCTCAGTGCTGGGGAGGGTGGTGGGCCCCCTTCCAGCCCTGTCTCTGTCCCCACAGATGGCCGTGCCTCAGAGCCTGGCTCTGTCTTTGCCCTGGAGGTTCTGAGACAGCGGCTGCATGAGAAGATCCAGCAGGCCCGGGGCCAGGGCAGCACCAAGGAACTGTCTACAGCCACTCTGGAGAAACGGCGCCGGAGAAAGCAGGAGCGGGAACGAAGGAAGAGGAAGCGGAAGGAGCTGCTTGCCAGGAAGAAAGCAGCCCAGACTCAGGAGGCAGAGGAGAAGGAGCCAGTGGCTGAGGCGGCCCCAGGGGTGGCCTGTGCAGAGCGCCCAGAGCCGGCGCTGATCTTCAATAAGGTGGAGGTGAGTGAGGAGGAGCCAGCCAGCAAGGCCCAGCGCAGGAAGGAGAAGCGACAGCGGGTGAAGGGGAACCTGACGCCGCTGACAGGCAGGAACTACCGGCAGCTGCTGGAGCGCCTGCAGGCACGGCGCGGCCGGCTGGAGGAGCTGCGTGAGCAGGATGCAGGCAAAGCCCAGGAGCTAGAGGCCAAAATGAAGTGGACCAATCTGCTGTACAAGGCGGAGGGCGTGCGCATCCGGGACAACGAGCACCTGCTGGAGGACGCGCTGAAGCGCAAGGAGAAGCGGCGGGCGCAGCGGCAGCGGCAGTGGGAGAAGCGCTCAGTGCAGGTGGTGGAGAAGATGCAGCAGCGGCAGGACAAGCGGCGCCAGAACCTGCGCAAGAAGAAGGCCGCACGGGCCGAGCGGCGCCTGCAGAAGGCCCGAAAGAAGGGCCGGGTGCTGCCGCAGGACCTGGAGCGGGCCGGCCTCGCCTGA

Related Sequences

XP_004849004.1 Protein

Surf6 PREDICTED: surfeit locus protein 6 isoform X2 [Heterocephalus glaber]

Length: 371 aa      
>XP_004849004.1
MASLLAKDAYLQDLARKICVQPGPEPPRRQRAGKARGSEAFGPPKKKRKKTQKKSREREQKSAERKAKSEGVKSPMASGSKKPAAVREEAQVLALSAGEGGGPPSSPVSVPTDGRASEPGSVFALEVLRQRLHEKIQQARGQGSTKELSTATLEKRRRRKQERERRKRKRKELLARKKAAQTQEAEEKEPVAEAAPGVACAERPEPALIFNKVEVSEEEPASKAQRRKEKRQRVKGNLTPLTGRNYRQLLERLQARRGRLEELREQDAGKAQELEAKMKWTNLLYKAEGVRIRDNEHLLEDALKRKEKRRAQRQRQWEKRSVQVVEKMQQRQDKRRQNLRKKKAARAERRLQKARKKGRVLPQDLERAGLA