Details from NCBI annotation

Gene Symbol Sec16a
Gene Name SEC16 homolog A (S. cerevisiae), transcript variant X8
Entrez Gene ID 101702311

Database interlinks

Part of NW_004624760.1 (Scaffold)

For more information consult the page for NW_004624760.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEC16A ENSCPOG00000013586 (Guinea pig)

Gene Details

SEC16 homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012231, Guinea pig)

Protein Percentage 82.57%
CDS Percentage 85.49%
Ka/Ks Ratio 0.2741 (Ka = 0.1019, Ks = 0.3717)

SEC16A ENSG00000148396 (Human)

Gene Details

SEC16 homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000325827, Human)

Protein Percentage 71.16%
CDS Percentage 76.59%
Ka/Ks Ratio 0.27737 (Ka = 0.1886, Ks = 0.6798)

Sec16a ENSMUSG00000026924 (Mouse)

Gene Details

SEC16 homolog A (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088796, Mouse)

Protein Percentage 72.55%
CDS Percentage 76.54%
Ka/Ks Ratio 0.2654 (Ka = 0.1841, Ks = 0.6938)

Sec16a ENSRNOG00000019122 (Rat)

Gene Details

SEC16 homolog A (S. cerevisiae) (Sec16a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060572, Rat)

Protein Percentage 72.68%
CDS Percentage 76.69%
Ka/Ks Ratio 0.25781 (Ka = 0.1805, Ks = 0.7)

Genome Location

Sequence Coding sequence

Length: 6969 bp    Location: 1629000..1597508   Strand: -
>XM_004848929.1
ATGCAGCCACCACCCCAGACGCTCCCACCTGGCATGGCTGGACCCCCTCCGGCTGGGACTCCTCGGAGCATGTTCTGGGGTAGCAGTGGCTACAGGAGGCCGGCCAGTAGCAGTGCCCTGGCGGCTCCACCTTGCCCACAGCAACCAGTCACGGATCCGTTTGCTTTTAGTAGACAGGTGCTCCAGAATAGCCCCCTGGACAGTTCTCCCAGGAGCAGCCTGCCTGCTGGGCATGACTCAGCCCTGCCAGTGTTTTCTCAGTGGCCTAGCTTGCCTGCGCCTCATGCCAGTCCTGGAGATGGTACCCGAGGGCCCCAGGAGCCTCCACCAGGACCTCTGTCACAGCCCGGAGCAGATCCATTTCCAGCTGTGTCCATCCCTCCATCGCTGCCAGGGCATGAGATGAGCCGGATTGCTGAAGTTGGTTTCAGCTCTGAGCCTGAAGTTCTGACTCCGCTGCATCCAACCCACCACATTCCAGGAGGAGGTCCTGACCCGTTTCATGGGGGCCACTGGCATGGGAGTGGGACTGGGCTGGAGCAGGCTCTGAGCAGGCACACTCTGAGTGAGGGTGGCGTGGCCTCAGCAGCAGCAGCAGCAGCAGCAGCATCCCCGTACTTGCCCCAGCCTCGGCCACAGATGCCAGCGCAGTGGGGGCCAGTGCAGGACAGCCCCCAGCCCTCCCAGCAGCATCCCTCACCTTGCCCAGAAGGACCTGTCCAGAGCATGGGGCCCCAGGCCACCAGCACTCCCTACTTCCCTGCCCCGTCGAGCCTGCACCATGGGCCTGGCTGTGAGCCCCATGCCCAGCTAGCATCTCTAGCACCTTTGCCCAGTGGCAGAGGAAGCGAGGTAGCCCCCTTGCAAAGTGGAAACCACTTAGCAGATAACTTCCACCCTGAAAATTCATTTGGGCACAAGTCCAGGATTGGGAATATGTGGGAAAGCCAGGAGTTCAGGCAGAATCCAGGACTGAGTAAAGAGCATTTCCAGGACCCTGCCCCTGGGAATCCCCTTACCCTGGGAAATAGCCCGGAAAACCACATTCACTACCCCCCAGTGGCTGGGACTGGCCAGGCCCCACTGGAAACAGCCTCAGGAACGCTCTCCATGTTTTTCCAAGGGGAAGAGACCGAAAATGAGGAGAATCTCTCATCTGAAAAGGCAGGCTCTGTTGGCCGATTGGACTTTGATGGTTTTTCCCCCAGCCCGGGACTGGGCCATCCACTCCGCCCTGCACACGTCATTGGCGGCGTCCACCAGGCCTTTCTCCAGGGATCCCACAGCGAGACCACGCAGCAGGAGGGAGGCGCACAGCCTTACTTCCCTCAGTCTGCAGGCATCCAAAACGATAAACAAACCACTAACAGTGCTGCTAGTGACACTTGGGGTGACACAGAGAATGCAGGGACTGGTGATGCTAGCAGCTCACAGTACGAGAATGTCGAAAACCTAGAATTCATTCAGAATCAAGAAGTTCTGCCCAGTGAGCCACTAAGTTTGGACGCCTCCTCCTCAAGTGACCAGTTCCGATATGGGCCCCTTCCCGCACCAGCTGTCTCCAGGCACGGTATCGTGGGCCTCACCCGAGGTGGGGCGCTGAATCTCGAGGCCCCGGACACACCCGTGCACCCAGTGCGATCTGACAGCATGTCATCCAGCTACAGTAGCCAGAGCCACCGGAGTCTCCCTGGATCGGCCAGGTCCCAGGAGCTGGTGGGCACGTTCATCCAGCAGGAAGTGGGAAAGCCTGAAGATGAGACAACAGGCAGTTTTTTTAAGCAAATCGATTCTTCTCCTGTGGGAGGCGAGCTAGAGGAGGTCGGTGGGAGCCAGAATTACTACAGCACCTTGTCCCAGCCCTCAACCCCAAGCCCCCCAAAACCTACAGGGATATTCCAGACAAGCGCAAATAGTTCTTTTGAGCCAGTAAAGTCCCATTCAGTTGGGGTGAAGCCGGTTGAGGCGGATCGCGCCAACATGGTGGGTGAAGTGAGGGGCACCCATGAGCACATGAAGAAGTGCAGATCTGTGGCCACACCACCCGACACCTCCCTGGGCAACCTGGAGCAACCTCCAGACAACATGGAGACACTGTTTGTACCCCAGGCCTGCCCCCCACCTCTGCCCCAGACTGGGGAAGCTGGACACACGGCACCTCCCTTGGATGCGGTGCGCCCGACTCTGGAGAAGAGGCCCTTAGCCAGGGCCCAGGGGCCCGCGAAGTGCGAGAGCCCCGCAACGACTCTGTGGGCACAGAATGAGCTGGCAGACTTTGGTGGCAATGTGCTTCTGGCCCCTGCTGCTCCTGCACTTTATGTACCTGCAAAGCCTCAGCCACTGGCGGTTGTTCAGCCTCCAGAAGAGGGGCTGCCTGGGCAGCAGTCTCGGAAGCCAGGCCCTGCCCACCCCTTGCAGAGCCAAGCCCACGTGGGTGCTTCTGAGAACCTGGAGAACCCTCCCAAGGTGGGTGGCAACGAAGCCCTTCAGTCCCAGGCAAGTTCCAGTTATGCAAGTTTGCTGTCCTCACCACCCACCGAGGCTTTGCAAAATCAGCCGGTCTTGATTGCCCAGCCTGATCAAAGCTATAATTTGGCTCAGCCCCTTAATATTTCTGTGTCCTTGCTAAATCCTGCTGAGAAGAATCAGTCCTGGGGAGATGATTTGGTGGGGGACAAATCCACGGTGAGCAGCTGGGCTCTTGGTGCTGATCCTGGTGAGCACACTGCTTTGTCTGGAGTCACACACGGCGCTGTGGTTGGCTTGTCTCTGCCTAACGGTCTCAGCCAAAGTAATGTTCCACATGGGTCTGGCTCTTCTGAAATGGCCTCCAATCAGCCTTCTAACTTGCTTGTGCAGCCGCTGTCCTTCCCAGTTTCTAAGAGCTCGCTGCTAGAAAGGCAGAAGACTCATAATTCAGAAAAGGTTCTTCCTGAGTTTGTTAATAGCCCTGCTGGAGGCACAGGTGTGATGTTAGTCCCCCCTGCCAGCAGTACCTCGATGCCAAGCAGCACTAAGGCAAATCACTCTGGTAACCGGGAAGAGGCCGCTGGAGGCTTAGACTTTACACCGAGTAGAACTTTGGAAAATCCTGCAAGACTGTACAGCCCATCCCATTTGGAGGGCCCAGCCACCCAGCAGGCTGCTGCCAATCCTCCCCGACAGTTGGGGCCTGGGGTGCATGACCCAGGCCATTTCTACCAGCAGGTGAGGGAAGATGCACAGGACCAGCAAGGCCTGGGAACCCAGGCAGAGGTGGTGGCCCCTCAGCCACAGGCTTCTCTCCCACAGATGCCCCAAGCAGCTTCAAATGCAGAAAGTCCCCCTACAGGAAGACAGTCCCAGGACTCAGCCCAGCCACCAGCAAGTTCAGCCTTGGCCGATGTGGGCCAGAAGCTGCTGCCTCAGCCACCTCAGTCCTCCAGTGTGTCGGCCACGTCCACCAACTCGAGCCAGGCAGGAGCGCGGCCTGAGCAGCCGTGGCTGCAGCCACCACCTTCGAGTGTGTTCGGCCCACCACCTCAGGACCTGGCATCCTACTACTATTACAGACCCCTGTATGATGCCTACCAAGCTCAGTACCCAGCGCCATACCCATCAGACCCTGGGACGGCCTCCCTCTGTTACCAGGACATCTATGGCCTGTATGAGCCCCGATACAGGCCCTACGACAGCTCTGCATCAGCGTACACTGAGAACTACCGCTATCCTGAGCCTGAGCGGCCCAGCTCCCGAGCGAGTCACTGCTCAGACCGACCCCCTGCCAGGCAAGGGTACCCTGAAGGGTACTACAGTTCCAAGAGTGGATGGAGCAGCCAGAGTGATTACTATGCCAACTATTACTCCGGCCAGTACAACTATGGAGATGCGGGCCGCTGGGACCGCTACTATGGCTCCCAATTCCGGGACCCCCGCACCTGGGACCGGAGGTACTGGTACAGCTCCGAGTACGACCCGCCCCGGAAGGATAGCTGTTCCCATGGCGGCGGCAGGCCTGAGAAGGGCGATGACCACTGGAGGTACGACCCTCGCTTCACCGGGAGCTTCGATGATGACGCAGAGCCGCACAGGGACCCCTATGGGGAGGAGGTGGACAGGCGCAGCGTGCACAGTGAGCACTCGGCACGCAGCCTGCACAGTACCCACAGCCTGCCCAGCCGCCGCAGCAGTCTGAGCTCCCACTCGCACCAGAGTCAGATCTACAGAAGCCACAATGTGACTGCCGAATCCTTTGAGGCGCCCCCTCCCCCAGGCTCCTTTCATGGAGACTTCGCCTACGGTACCTACGGCAGCAACTTCAGTGGCGCTCATGGCTTTTCAGAGTATGGCTATCCCGTGGACACCTGGCCTGCTGCGGAGCAAGTTCCGTCGAGACCGACGTCTCCCGAGAAGTTTTCAGTGCCACATCTCTGTGCTAGATTCGGTCCTGGCAGTCAGCTCATCAAGGTGATCCCCAACCTGCCTTCCGAAGGCCAGCCTGCCCTGGTGGAGGTCCACAGCATGGAGACCTTGCTGCAGCACACAGCAGAGCAGGAGGAGCTGCGTGCGTTCCCGGGACCCCTGGGCAAAGATGAGACCCACAAAGTGGACGTTATTAACTTTGCACAGAACAAAGCGACAAAATGTTTACAGGATGAGAATCTACTTGACAAAGAATCTGCGAGTCTTCTCTGGAACTTCATTATCCTATTGTGCCGGCAGAATGGGACCGTGGTGGGAACAGACATTGCGGAGCTATTGTTGCGAGACCACAGAACTGTGTGGCTTCCTGGGAAGTCACCCAACGAGGCGAACCTGATCGATTTTACCAACGAGGCTGTGGAGCAAGTGGAGGAGGAGGAGGAGTCTGGCGAGGCCCAGCTCTCCTTCCTCATGGACAGTCAGGCGGCGGTCACCAGCACCCTGGAGAAGGAGACCGAGAGGTTCCGGGAGCTGCTGCTCTACGGCCGCAAGAAGGATGCTCTGGAGTCCGCCATGAAGAATGGCCTGTGGGGTCACGCCCTGCTCCTGGCCAGTAAGATGGACAGCCGGACCCACGCCCGCGTCATGACCAGGTTTGCCAACAGCCTCCCCATCAATGACCCCCTGCAGACAGTCTACCAGCTCATGTCTGGGCGCATGCCTGCCGCATCCACGTGCTGTGGAGATGAGAAGTGGGGAGACTGGAGGCCGCACCTTGCCATGGTTCTGTCCAACTTGAGCAACAACGTGGATGTGGAGTCCAGGACCATGGCCACGATGGGCGACACCCTTGCCTCCAAAGGCCTCTTGGATGCTGCACACTTCTGCTACCTCATGGCCCAGGTTGGATTTGGGGTGTACACGAAGAAAACCACAAAGCTCGTCTTGATTGGATCGAATCACAGCTTGCCATTTTCGAAGTTTGCCACCAACGAGGCTATTCAAAGGACAGAAGCCTACGAGTATGCTCAGTCCCTTGGGGCCCAGACCTGCTGCTTACCTAACTTCCAGGTGTTTAAATTCATCTACTGCTGCCGCCTGGCCGAGATGGGGCTTGCCACCCAGGCCTTCCACTACTGCGAAGTGATTGCCAAGAGCATCGTGACACAGCCCGACATCTACTCGCCCGTGCTGATCGGCCAGCTGGTCCAGGTGGCTTCCCAGCTGTGCCTCTTTGACCCTCAGCTGAAGGAGAAGCCAGAGGAAGAGTCCTTCATGGAGCCCGCCTGGCTGGTCCAGCTGCAGCACGTGCACAGCCAGATCCAGGAGGGCACCGTGCCCTGTAGCCAGGATGGAGCTGAACCCTGGCGCTGTCCCAGCACGCCAGGCTCTGAGGTGGAGCAGTTGGATGGCCCAGGACTCGGCCGGCTGGTGGGGCTGGGAACTGAGCCCTCCCTGCTCCCCGGCCCAGAGGGCCTGAGTCCAGGCGGGCAGCTGCCACCCTCAGCTCTGCAGACTCTCCCTGGTGGCCAGCCACCCCACCCTGCCAGGGTGCCGATGTTCTCAGTGCCACTGGCCTTGGGCACCCAGGAGCCTGCACTCGGCTTCCCAGAGACCCCCAGGCCTGACCCTATGGCTCTGTACCCTGGGCCAGGCCTGCCACTTGGCGCCCCGTCTCTGCAGGACAGTGGCCCCCTGCTGCAGGCCCGGAGCCCGGACCCAGGGATGGCGCCGCGGGAGTCACCTGTCCGAAACTCACTGCCCGAGCCAAGCGAAGAGGATTTTGGCGGAAACTTTGCTAATCTGGGCTCCCCGAGGATGGCTCAGGACCTGGAGACGTCCCCAGCCTGGGATAGCGCTGGCTCAGGACCACCACAGCCTGCTCTGCCTCTGACACCTGCACCTGAAGCCAAGAGAGCAGCGCCGGCAGCATGGAAAGAGACCAAAGAACCCAAGAAGAGTGAGTCCTGGTTCTCCCGCTGGCTTCCCCGGAAGAAGAGGACGGAAGCTTACCTGCCAGACGACAAGAATAAATCGATTGTCTGGGATGAAAAGAAAAACCAGTGGGTGAACTTGAATGAGCCGGAAGAGGAGAAGAAGGCTCCGCCCCCGCCTCCCACAGCCTTACCCAGGGCCCTGCAGGGGCCTCCCCCTGGGCCAGGTGGTCCTCCCGCAGCCTCCGTGAACGTGTTTTCCAGGAAAGCAGGTGGATCCAGGGCTCGCTACGTGGACGTCCTGAACCCAGGCGGCGCCCAGCGAAGTGAGCTGGCTCTTGCTCCTGCAAACTTTTTCGCTCCGCTCGCCCCACTCCCGATCCCTCCTAATGTGTTCGTACCCAGCCCAGATGCAGAGGAGCCGCCGCTTGCAGATGGGGCTGGCAGTAGGGGGCAGGTGCCAGCTGGGGCTCTGGCCAATCTGGAGCCTGTGGAGGACCCCAAGCTGTCGCGCTGGAGCTCGGTGAGCTCGCTGTCCCGGGAAGTGGGCCAGCACTTCCAGCAGGTACCAGGCTGCCAGGCCTCTGCTCGTGTGTCCTGTGTCCCCTCCTCGCCCAATGCATCTTGTCACTAA

Related Sequences

XP_004848986.1 Protein

Sec16a PREDICTED: protein transport protein Sec16A isoform X8 [Heterocephalus glaber]

Length: 2322 aa      View alignments
>XP_004848986.1
MQPPPQTLPPGMAGPPPAGTPRSMFWGSSGYRRPASSSALAAPPCPQQPVTDPFAFSRQVLQNSPLDSSPRSSLPAGHDSALPVFSQWPSLPAPHASPGDGTRGPQEPPPGPLSQPGADPFPAVSIPPSLPGHEMSRIAEVGFSSEPEVLTPLHPTHHIPGGGPDPFHGGHWHGSGTGLEQALSRHTLSEGGVASAAAAAAAASPYLPQPRPQMPAQWGPVQDSPQPSQQHPSPCPEGPVQSMGPQATSTPYFPAPSSLHHGPGCEPHAQLASLAPLPSGRGSEVAPLQSGNHLADNFHPENSFGHKSRIGNMWESQEFRQNPGLSKEHFQDPAPGNPLTLGNSPENHIHYPPVAGTGQAPLETASGTLSMFFQGEETENEENLSSEKAGSVGRLDFDGFSPSPGLGHPLRPAHVIGGVHQAFLQGSHSETTQQEGGAQPYFPQSAGIQNDKQTTNSAASDTWGDTENAGTGDASSSQYENVENLEFIQNQEVLPSEPLSLDASSSSDQFRYGPLPAPAVSRHGIVGLTRGGALNLEAPDTPVHPVRSDSMSSSYSSQSHRSLPGSARSQELVGTFIQQEVGKPEDETTGSFFKQIDSSPVGGELEEVGGSQNYYSTLSQPSTPSPPKPTGIFQTSANSSFEPVKSHSVGVKPVEADRANMVGEVRGTHEHMKKCRSVATPPDTSLGNLEQPPDNMETLFVPQACPPPLPQTGEAGHTAPPLDAVRPTLEKRPLARAQGPAKCESPATTLWAQNELADFGGNVLLAPAAPALYVPAKPQPLAVVQPPEEGLPGQQSRKPGPAHPLQSQAHVGASENLENPPKVGGNEALQSQASSSYASLLSSPPTEALQNQPVLIAQPDQSYNLAQPLNISVSLLNPAEKNQSWGDDLVGDKSTVSSWALGADPGEHTALSGVTHGAVVGLSLPNGLSQSNVPHGSGSSEMASNQPSNLLVQPLSFPVSKSSLLERQKTHNSEKVLPEFVNSPAGGTGVMLVPPASSTSMPSSTKANHSGNREEAAGGLDFTPSRTLENPARLYSPSHLEGPATQQAAANPPRQLGPGVHDPGHFYQQVREDAQDQQGLGTQAEVVAPQPQASLPQMPQAASNAESPPTGRQSQDSAQPPASSALADVGQKLLPQPPQSSSVSATSTNSSQAGARPEQPWLQPPPSSVFGPPPQDLASYYYYRPLYDAYQAQYPAPYPSDPGTASLCYQDIYGLYEPRYRPYDSSASAYTENYRYPEPERPSSRASHCSDRPPARQGYPEGYYSSKSGWSSQSDYYANYYSGQYNYGDAGRWDRYYGSQFRDPRTWDRRYWYSSEYDPPRKDSCSHGGGRPEKGDDHWRYDPRFTGSFDDDAEPHRDPYGEEVDRRSVHSEHSARSLHSTHSLPSRRSSLSSHSHQSQIYRSHNVTAESFEAPPPPGSFHGDFAYGTYGSNFSGAHGFSEYGYPVDTWPAAEQVPSRPTSPEKFSVPHLCARFGPGSQLIKVIPNLPSEGQPALVEVHSMETLLQHTAEQEELRAFPGPLGKDETHKVDVINFAQNKATKCLQDENLLDKESASLLWNFIILLCRQNGTVVGTDIAELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEEESGEAQLSFLMDSQAAVTSTLEKETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLSNNVDVESRTMATMGDTLASKGLLDAAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSLPFSKFATNEAIQRTEAYEYAQSLGAQTCCLPNFQVFKFIYCCRLAEMGLATQAFHYCEVIAKSIVTQPDIYSPVLIGQLVQVASQLCLFDPQLKEKPEEESFMEPAWLVQLQHVHSQIQEGTVPCSQDGAEPWRCPSTPGSEVEQLDGPGLGRLVGLGTEPSLLPGPEGLSPGGQLPPSALQTLPGGQPPHPARVPMFSVPLALGTQEPALGFPETPRPDPMALYPGPGLPLGAPSLQDSGPLLQARSPDPGMAPRESPVRNSLPEPSEEDFGGNFANLGSPRMAQDLETSPAWDSAGSGPPQPALPLTPAPEAKRAAPAAWKETKEPKKSESWFSRWLPRKKRTEAYLPDDKNKSIVWDEKKNQWVNLNEPEEEKKAPPPPPTALPRALQGPPPGPGGPPAASVNVFSRKAGGSRARYVDVLNPGGAQRSELALAPANFFAPLAPLPIPPNVFVPSPDAEEPPLADGAGSRGQVPAGALANLEPVEDPKLSRWSSVSSLSREVGQHFQQVPGCQASARVSCVPSSPNASCH